Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g066830.3.1
CDS Infomation

Ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** A0A0B0MXS6_GOSAR)
Sequence

ATGGGGGCCTTAACATGTAGCAGCCGAAAACGTGGTGATGATTTTTTCAACTCGAATTAC
AAAACCCCACTTTCAGTTTCCTCTAACGTTGACCACATATCCAAAAAACCTAGGCTTTCT
CCGTCTATGAACCAAATCCAAGATCACCCCTTCTCCAGAAAATCAATTGCTGCAAGAATT
TTCAAATATCCATCTAATATAACACCCATAAAAAGAGAAATTCATGCTCCTTGTAGACGA
TTAAGAAGAGGGTCCAACTTAAAATCTGACAAAATGGGGAATTTTCTAACTCAACAGTAT
GATAGAGCTAAAAGAAGTGCATTTGAAACGCTGAGGTACGTGAAAAAAGATAAAGAAGTG
ATAAACATTGATGATGATGAAATTTGTGAAGAGGGTGTGTCTGAGGATTCAAGTGTTAAG
GAATTGGGGACTGGGGTTGATGCAAAAACGGGTCTTGCTAGTGGGTCGGGTTCGCAATGG
AAGGAGAGTAATGGGGTTGTTGAAATCATGGATAATCCTGATGCTGTTAAGGATATGGAT
AGGAACTTTCAGGTTTTGAGTTCATCTGTTGTAACAGTGTCGGATGGTGTGAAGTTGAAG
GTGGAGAATGCAGAAAAGATGCTAGATACATTATCTTTGAGTAGCAAGTTTGATTCTGCT
TCTACTTCATCTTCAGTTCCTCCATATAAGAAATTGCTGGGTTCAGCTGAGAAAAGAAAT
GACCATTTAAAGAGACTGCAATTTCATATAGAGTATACTGAGAAGCGTCGTGAGACGCAA
CATTTGTTAAGGCCTCAGAAGAAAGAAGAATATGTTAAGGAGGATGTGATTACAGAACCC
TTTATGCTCCTTGATGAGGAGGAAGAGGCTGAAGTTTCTCGAGCTTTATCTAATTCTAGC
AGGAGGAAGGTTTTGGCAAAACATGAGAACTCCAATATTGATATTACTGGAGAGATATTG
CAGTGTTTGAGGCCTGGGGCATGGTTGAACGACGAGGTCATTAATGTGTATCTTGAGTTA
CTAAAAGAGAGAGAAAGAAGGGAGCCCAAAAAGTTCTTGAAATGTCATTTCTTTAACACA
TTCTTTTACAAGAAGTTAATCAGTAACAAGGGAGACTATAACTATCAATCTGTGAAAAGA
TGGACATCCCAAAGGAAGCTGGGTTACTGCCTCTTTGAATGTGACAAAATTTTTGTCCCT
ATCCACAAACAAGTACATTGGTGCTTAGCTGTCATCAACAAGAAGGATGAAAAGTTCCAA
TATCTTGATTCACTTGGAGGAACAGATCAGCAAGTATTGGAAGTGCTGGCTAGGTACTTC
ATTGACGAGGTGAAGGACAAGAATGGGAAATATATTGATATTAACTCATGGAAGCTAGAG
TTTGTTGAGGACCTTCCAGAGCAAGAGAATGGGTTTGACTGTGGTATGTTCATGCTCAAG
TATGCTGATTTCTACAGCAGAGATATAGGACTCTGTTTCAGTCAGGAGCACATGCCATAT
TTCAGGTCGAGGACTGTCAAGGAGATCTTAAGGTTGAAAGCTGAGTAA

Peptide Sequence

PEP ID

Solyc01g066830.3.1
PEP Infomation

Ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** A0A0B0MXS6_GOSAR)
Sequence

MGALTCSSRKRGDDFFNSNYKTPLSVSSNVDHISKKPRLSPSMNQIQDHPFSRKSIAARI
FKYPSNITPIKREIHAPCRRLRRGSNLKSDKMGNFLTQQYDRAKRSAFETLRYVKKDKEV
INIDDDEICEEGVSEDSSVKELGTGVDAKTGLASGSGSQWKESNGVVEIMDNPDAVKDMD
RNFQVLSSSVVTVSDGVKLKVENAEKMLDTLSLSSKFDSASTSSSVPPYKKLLGSAEKRN
DHLKRLQFHIEYTEKRRETQHLLRPQKKEEYVKEDVITEPFMLLDEEEEAEVSRALSNSS
RRKVLAKHENSNIDITGEILQCLRPGAWLNDEVINVYLELLKERERREPKKFLKCHFFNT
FFYKKLISNKGDYNYQSVKRWTSQRKLGYCLFECDKIFVPIHKQVHWCLAVINKKDEKFQ
YLDSLGGTDQQVLEVLARYFIDEVKDKNGKYIDINSWKLEFVEDLPEQENGFDCGMFMLK
YADFYSRDIGLCFSQEHMPYFRSRTVKEILRLKAE*

Transcript Sequence

Transcript ID

Solyc01g066830.3.1
Transcript Infomation

Ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** A0A0B0MXS6_GOSAR)
Sequence

ATTAAAACTATAGACAAAATTCTCAAAAGGTTGTCTCTCTCTATTTTTATTGCACTCATA
TTGTAGTGTTGATACTAGTTTGATTTTAGGACAAAAACAGCAAAATAGTTAACTTGAATT
CCCCAAGCAGCCGGGAAAGCCTCTGAAACCCTTTTCCCTTGCAAACAAAATTCCCTGCGA
TCTTCTGCAACTTCCCCCTTTGTCCCTTCACGTTCTTCTTTCTTCCTTCTCCTCGATGAT
TCACTGCGGTTGTCAATTTCCAGAAAAGCTCGGCAAATATCTTCTTCAATGGGGGCCTTA
ACATGTAGCAGCCGAAAACGTGGTGATGATTTTTTCAACTCGAATTACAAAACCCCACTT
TCAGTTTCCTCTAACGTTGACCACATATCCAAAAAACCTAGGCTTTCTCCGTCTATGAAC
CAAATCCAAGATCACCCCTTCTCCAGAAAATCAATTGCTGCAAGAATTTTCAAATATCCA
TCTAATATAACACCCATAAAAAGAGAAATTCATGCTCCTTGTAGACGATTAAGAAGAGGG
TCCAACTTAAAATCTGACAAAATGGGGAATTTTCTAACTCAACAGTATGATAGAGCTAAA
AGAAGTGCATTTGAAACGCTGAGGTACGTGAAAAAAGATAAAGAAGTGATAAACATTGAT
GATGATGAAATTTGTGAAGAGGGTGTGTCTGAGGATTCAAGTGTTAAGGAATTGGGGACT
GGGGTTGATGCAAAAACGGGTCTTGCTAGTGGGTCGGGTTCGCAATGGAAGGAGAGTAAT
GGGGTTGTTGAAATCATGGATAATCCTGATGCTGTTAAGGATATGGATAGGAACTTTCAG
GTTTTGAGTTCATCTGTTGTAACAGTGTCGGATGGTGTGAAGTTGAAGGTGGAGAATGCA
GAAAAGATGCTAGATACATTATCTTTGAGTAGCAAGTTTGATTCTGCTTCTACTTCATCT
TCAGTTCCTCCATATAAGAAATTGCTGGGTTCAGCTGAGAAAAGAAATGACCATTTAAAG
AGACTGCAATTTCATATAGAGTATACTGAGAAGCGTCGTGAGACGCAACATTTGTTAAGG
CCTCAGAAGAAAGAAGAATATGTTAAGGAGGATGTGATTACAGAACCCTTTATGCTCCTT
GATGAGGAGGAAGAGGCTGAAGTTTCTCGAGCTTTATCTAATTCTAGCAGGAGGAAGGTT
TTGGCAAAACATGAGAACTCCAATATTGATATTACTGGAGAGATATTGCAGTGTTTGAGG
CCTGGGGCATGGTTGAACGACGAGGTCATTAATGTGTATCTTGAGTTACTAAAAGAGAGA
GAAAGAAGGGAGCCCAAAAAGTTCTTGAAATGTCATTTCTTTAACACATTCTTTTACAAG
AAGTTAATCAGTAACAAGGGAGACTATAACTATCAATCTGTGAAAAGATGGACATCCCAA
AGGAAGCTGGGTTACTGCCTCTTTGAATGTGACAAAATTTTTGTCCCTATCCACAAACAA
GTACATTGGTGCTTAGCTGTCATCAACAAGAAGGATGAAAAGTTCCAATATCTTGATTCA
CTTGGAGGAACAGATCAGCAAGTATTGGAAGTGCTGGCTAGGTACTTCATTGACGAGGTG
AAGGACAAGAATGGGAAATATATTGATATTAACTCATGGAAGCTAGAGTTTGTTGAGGAC
CTTCCAGAGCAAGAGAATGGGTTTGACTGTGGTATGTTCATGCTCAAGTATGCTGATTTC
TACAGCAGAGATATAGGACTCTGTTTCAGTCAGGAGCACATGCCATATTTCAGGTCGAGG
ACTGTCAAGGAGATCTTAAGGTTGAAAGCTGAGTAAAAAGCCTGAACATGCTCTTTGCTG
CAATTTCAAATATCCGGTGTGAGCAAACGGAGTGGACTATGGAGTTTGTTGGGATGATTG
ATGTATTGCTAACAATTTCCTGAAGGCCTCGTCTGATTAGTATATTTTGTGGTTTGACTG
TCTGATGAAGACATGATTTTGTAGGTTGAGGTTTGAAGTGCTTTAGTTGTTCTTAATTGT
TTCCTTTTTAGGTAGGTCTTTAGAATTCTCATATATAGCATCCAGCTGTCTTTTGGAGAA
ATCTTAGAGCAATTGAGGAATTCCTTACTGACCTTTCTCTACTCATGAAGATGAACTGGA
AGGAAGCACAAAGTTGTAACTTATGAAATTGTTTATTTCTTCAGTAAAGAGGAAGTTAAA
GATTTCTGTTGTTTGATCTGTGTTGCACACTTTGGGGTTACATTCTCATCAACAGGAATG
GTTTATTCAGTTTATATGTCGTGTTATCAAAAGCTTGCATCTTGGTTGGGTTCAATTTGT
TT