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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g066070.3.1
CDS Infomation

Pectin lyase-like superfamily protein, putative (AHRD V3.3 *** A0A061EWE0_THECC)
Sequence

ATGACAATTATTAATGGATCATCTTTAGCCCTCATTCTTGTTTTGTCAACTTTGGTTACC
TGCAAATGCAATGCAGCTGGGGTTCCTTTAGCTGATCAAACCATTTTTAATGTCATGGAT
TTTGATGCCAAACCTAACTCAGAACTTATGAGCACACAGGCATTTATGAAGGCGTGGCGA
GCTGCTTGTGATTTCACTGGTCATGCAAGAGTTTTTGTCCCTCCAGGGGTATATACACTG
GGAGAGACCGTATTTGCAGGACCCTGCAAAGGGACACATTCTATAATACTTGAAATTGCA
GGAACTTTAAAGGCAGTGCCTGATGTTTCTGAATATTCAAACTTTGCTTGGATTTCGTTC
GAGTCTATTAATGGCGTTATCATTACTGGTGGAGGCACTCTAGATGCTCAGGGACAATCT
GTTTGGCAGTTTAACGACTGTAAAACGAATCCTAATTGTGTCCACCTACCTGCCACCTTG
CATTTCAATAATATTCGTAATGGAAAAATAATGAGGTTGAAGTTGATAAATAGCATGGGA
TTTCATTTACATATTACTAGTAGCTATTTGGTAAGGTTCCATGGACTTACAATCGATGCC
CCTGAAGATAGCCCAAATACTGATGGAATACATATAAGCAAGTCCAACACCATAAAACTT
TCCCGGAGTGTCATTAGGACTGGCGATGATTGTGTTTCATTCGGACAAGGTACAAACAAT
GTCACCGTTAACAAAGTCACTTGTGGCCCTGGCCATGGCATTAGTGTCGGTAGTCTTGGT
AAGTTGGCTGGCGAATTGGAAGTTAGAGGACTTATTGTGAAGAATTGCACGTTGAGAGGA
ACGACAAATGGTATCCGAATCAAAACTTATGCAGGGGAAAATGCAAACAGAGCATTAGGG
ATGATGTTCAGCGACATTGTTATGGAAAACGTTAAAAATCCAATCATCATAGACCAGAGC
TATGGTGACAAATCAACCGATTCGTTATCACAAGTGAAAATAAGTGATGTGGTTTACCAG
AACATAAGGGGAACAACAAGCAGTGAGATACCGGTTCAACTGTTGTGCAGTTCAAAACTC
CCTTGTGAAAATGTTCGACTCACAAACATAAATTTGAAGCATATAGAGAATACGCCAATT
ACTTCTCAATGTCAAAATGTAAATGTTGGCTATACTGGCGTTCAAATTCCGTCACCTTGT
CAGGGACCTTCGTCATAG

Peptide Sequence

PEP ID

Solyc01g066070.3.1
PEP Infomation

Pectin lyase-like superfamily protein, putative (AHRD V3.3 *** A0A061EWE0_THECC)
Sequence

MTIINGSSLALILVLSTLVTCKCNAAGVPLADQTIFNVMDFDAKPNSELMSTQAFMKAWR
AACDFTGHARVFVPPGVYTLGETVFAGPCKGTHSIILEIAGTLKAVPDVSEYSNFAWISF
ESINGVIITGGGTLDAQGQSVWQFNDCKTNPNCVHLPATLHFNNIRNGKIMRLKLINSMG
FHLHITSSYLVRFHGLTIDAPEDSPNTDGIHISKSNTIKLSRSVIRTGDDCVSFGQGTNN
VTVNKVTCGPGHGISVGSLGKLAGELEVRGLIVKNCTLRGTTNGIRIKTYAGENANRALG
MMFSDIVMENVKNPIIIDQSYGDKSTDSLSQVKISDVVYQNIRGTTSSEIPVQLLCSSKL
PCENVRLTNINLKHIENTPITSQCQNVNVGYTGVQIPSPCQGPSS*

Transcript Sequence

Transcript ID

Solyc01g066070.3.1
Transcript Infomation

Pectin lyase-like superfamily protein, putative (AHRD V3.3 *** A0A061EWE0_THECC)
Sequence

TCAATTCCACTAAAAATATATTATATGAATAAGAGGGTGTGTAATGTATCGCTCAATAAA
TTGAAGCATGAAATCAACTTAATCAAACAACTTCAAAAAAAAAAAAAGTTGCACCTCACT
AAAAGGGAAAATTAATTAGAGTGGATAAAAGTCTCATAAGTGATTGATGAATGAACTGGT
AATCTCCTTATATGGACCCCTCTCTGAGTTAGATTCAGTTGACATATCTCTAATAGTACT
ATATTTAGGCACAGAGAGAAAAAAGAACAAGCATCCACAAATTCAAGGGCTAGCAATTTA
TTGAATTAAGCAAATATATGAAAATGACAATATGTAAATATGACAAGTAAATTAAAGGAG
GCAAGAAAAGAAGCAACAATGTCCTCAAAGTTTAACAAAACATTATTTTGTTAGAGCATT
TGTCGGAGTAATTTTCCTAATTTGCTAATAAAATGGCAAGGAAGAAGAATTCATACAAAG
AGAGGGAGAGCTCTTATACCCTCAATAAAATCCTGGGTAAGAGCTATAAAATTCATTAAA
ATTGTAACATATCTCAAACTCTCTTTGGTTAAAAGCAAAAATAATAAATAAAAAAAGGTT
AATTGTTGCAAAAAAAAAAAAATAGCCATGACAATTATTAATGGATCATCTTTAGCCCTC
ATTCTTGTTTTGTCAACTTTGGTTACCTGCAAATGCAATGCAGCTGGGGTTCCTTTAGCT
GATCAAACCATTTTTAATGTCATGGATTTTGATGCCAAACCTAACTCAGAACTTATGAGC
ACACAGGCATTTATGAAGGCGTGGCGAGCTGCTTGTGATTTCACTGGTCATGCAAGAGTT
TTTGTCCCTCCAGGGGTATATACACTGGGAGAGACCGTATTTGCAGGACCCTGCAAAGGG
ACACATTCTATAATACTTGAAATTGCAGGAACTTTAAAGGCAGTGCCTGATGTTTCTGAA
TATTCAAACTTTGCTTGGATTTCGTTCGAGTCTATTAATGGCGTTATCATTACTGGTGGA
GGCACTCTAGATGCTCAGGGACAATCTGTTTGGCAGTTTAACGACTGTAAAACGAATCCT
AATTGTGTCCACCTACCTGCCACCTTGCATTTCAATAATATTCGTAATGGAAAAATAATG
AGGTTGAAGTTGATAAATAGCATGGGATTTCATTTACATATTACTAGTAGCTATTTGGTA
AGGTTCCATGGACTTACAATCGATGCCCCTGAAGATAGCCCAAATACTGATGGAATACAT
ATAAGCAAGTCCAACACCATAAAACTTTCCCGGAGTGTCATTAGGACTGGCGATGATTGT
GTTTCATTCGGACAAGGTACAAACAATGTCACCGTTAACAAAGTCACTTGTGGCCCTGGC
CATGGCATTAGTGTCGGTAGTCTTGGTAAGTTGGCTGGCGAATTGGAAGTTAGAGGACTT
ATTGTGAAGAATTGCACGTTGAGAGGAACGACAAATGGTATCCGAATCAAAACTTATGCA
GGGGAAAATGCAAACAGAGCATTAGGGATGATGTTCAGCGACATTGTTATGGAAAACGTT
AAAAATCCAATCATCATAGACCAGAGCTATGGTGACAAATCAACCGATTCGTTATCACAA
GTGAAAATAAGTGATGTGGTTTACCAGAACATAAGGGGAACAACAAGCAGTGAGATACCG
GTTCAACTGTTGTGCAGTTCAAAACTCCCTTGTGAAAATGTTCGACTCACAAACATAAAT
TTGAAGCATATAGAGAATACGCCAATTACTTCTCAATGTCAAAATGTAAATGTTGGCTAT
ACTGGCGTTCAAATTCCGTCACCTTGTCAGGGACCTTCGTCATAGTACCCTGTGATCAAT
TTGGAGTGAAAATGCAAATGTTGGCTATACAGTGGAGAGAAATGCAGAAAGCCAATCTGA
TCAACGTCGATGTTCAAGAGTAACAAGAACTGATCGAAAATATGGTGTCGTAGACAAAAA
GATAATACCTCCCACCCACCATCAACACGTACAATTAGTGGTATGGATACAAGTCTTAGG
ACAAAATAGGTATGGATGTAATTCTCATTGTTCTAATTCCCTCTTCCGCTTGTAATAGAT
TTAAACGAAAAAAAAAAAGTTTGCCCTCACATCTTTTATATATTCACCTTTCACTATGCA
CAACTCCACCCCAAATTCCCAAAAAATATACAAAAAAAATTACTAGATTTGTAGTATTTG
GTTATAGTAGTTAAAAGAAGCCATCCCTTGGGGATATGTATAAAAGGAAGATTTAAATTA
GTTTCGTACTTTCGCTGTTTTATTTATCTCTTTGTAATAGTTCGATCCTTGATTCAAAAC
TGTATATATTATAACTTATGCGGGATTTTAACCCCAAATTCACTAAAACCAACGACCTAA
CAAGATTATAAAAGCAACCCTAAGATCTAAGT