Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g058450.3.1
CDS Infomation	Flowering time control protein FCA, putative (AHRD V3.3 *** B9RZT3_RICCO)
Sequence	ATGGATAGACACAAAGGAGAGAGGTACAACTCAGGCCCATTTCAATACAAGCATTCAAGG GGTCCTCCATCTCCTAGAACTTTTTCTGATGATTCTGGGAACCCTCAACATCATCATCGT CAAAGTCAGGATGTATACCGTGGCCCCCGTTACCACCGGGCCTTTAATAGCCCTACTCAG CACCCTAGTGATACTGCTGCTACTGGTGGTGGGGTTGAGTCTGGAAGGTTGCATTTAGGT TACCAGATGCCGCCACCGCCTCGTCCTTTTTCGGGGCCTCTTTCAGGGCAAAAACGGGGT TACCCTTCTCCAGAACAAGTTGACGAGGCTGGTTTTGCCAAACTTTTTGTTGGATCTGTC CCAAGAACGGCAACTGAAGAAGATATCCGACCTTTGTTTGAGGAACAAGGACGAGTACTC GAGGTTGCTTTCATTAAAGATAAGAGAACTGGGCAACAACAAGGATGTTGTTTTATTAAG TATGGTACTTCAGCTGAAGCTGATAGAGCTATAAGAGCATTGCACAATCAATATACTTTG CCTGGGGGAATTGGTCCTATTCAAGTTAGGTATGCAGATGGTGAACGTGAACGCCTTGGT GCAGTTGAATACAAGTTATTTGTTGGGTCATTGAACAAACAAGCTACAGAGAAGGAAGTT GAAGAAATATTTTTACCATATGGTCGTGTGGAAGATGTCTATCTCATGCGTGATGATATG AAGCAAAGTCGTGGTTGTGGATTCGTCAAATATTCTAATAGAGATATGGCAATGGCTGCT ATAAACTCTCTGAGTGGAAATTATACAATGAGGGGGTGCGATCAACCTTTAACTGTTCGG TTTGCTGACCCCAAGAGACCTAAACCTGGAGAACAACCTAGAGGTGGTGGGCCAGCTTTT GGTGGACCTGGTGTTGGACCTCGCTTCCCAACACCTGGGATTAGACCACCACCTAATATT GGCGAGCCTGTGCAAGGACAAGTTGGTCCTAATGCTTGGCGTCCTATGAGCCCTGAAGGT TTCAGGCCAGTTTCCAACCAAGGGATGCATGGTTTTGGAAATCAATTTCCTCCTAGATCC ACTGATACCACAGTGCCTTCTGCTTTGGGTGGCTCCTTCAGGAGTGTTAATGGCACTGGA AATGGGATGCTTACAGGAATTGCAGCTTCTTCTGCTCCTACACCGCAACTGTCTGCTCAA CAATTCCCCACTGTTGGCCAACAAATTTCTTCACTACAAAAGCCACTTCAGTCACCACAG CATATACCATCTTCCGTGCAGTTTCAGCCTCCAGCATCAACACCTATGTCACAGGGACCA ACATCAAATGCTTTGTTTGGGCAGAGAAATCAAGTACAAATGTCCCACTCTGCTGGTCAA AGTCCTTTCCGTCAGGGAGCGCTGTCGCAGCAGTCACTTGGTTTGACTGGGCAATCAACT GTTTCTCAGCCCCAGGTGCAGCGCAATATGACACCTGTCATTGGACATACACCCTTAAGT AACAACATGCAAATACATGCTGCATCTGCAAATGCAAACCAGCAGCCTTTCCAGCAGCAG TCGGTCCAACATCTTCAACAGCCACCTTCGCAACTAGCACAGATGTTGTCTCAACAGACC CAAACTCTGCAGGCGAGTTTTCAATCATCGCAGCAAACCTTTACTCAGCTTCAGCAACAA TTGCAGCTCATGCAACCATCTAGCCAAAACTCAGCAGTCCAGCAGGGCACACAAGATGCT AAACAACAGTCTGCATGGCCTGGGCTTGTTCAACAACCTGCACCTAGTGCCACTGCTGTC CAACCAAAAGCAGATGCACTTCCTGCTACATCTGGAATGAACCAGACTACAAGTCTGGTG AAATGTAATTGGACAGAGCACACATCTCCTGATGGATTCAAGTACTATTACAGCAGTACT ACTGGAGAAAGCAGGTGGGAAAAGCCGGAGGAGCTGATATCATATGAACAACAACAGCAA AAACTGTCAGTCCAACAGTCTCATAATCAGGCTCAACCCCAGGGGTTTCCTTCCCAACAA GTTCCTGAAATGCAAGCACAGCCTCGGAGTCAGCTTCCAACATATATCCCAACGCAGGTC CGCCCTCCTCAACTATCACAACAAGCTTCTCAAGCTACAATGTACCCAGTTGGAATGACA GGTCAACAACCGATTCAGGGAATTCAAGCTGCTCAGGAGTGGATGTGGAAAAACAAGCCT GAAGGAGGTTGA

Peptide Sequence

PEP ID	Solyc01g058450.3.1
PEP Infomation	Flowering time control protein FCA, putative (AHRD V3.3 *** B9RZT3_RICCO)
Sequence	MDRHKGERYNSGPFQYKHSRGPPSPRTFSDDSGNPQHHHRQSQDVYRGPRYHRAFNSPTQ HPSDTAATGGGVESGRLHLGYQMPPPPRPFSGPLSGQKRGYPSPEQVDEAGFAKLFVGSV PRTATEEDIRPLFEEQGRVLEVAFIKDKRTGQQQGCCFIKYGTSAEADRAIRALHNQYTL PGGIGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVEEIFLPYGRVEDVYLMRDDM KQSRGCGFVKYSNRDMAMAAINSLSGNYTMRGCDQPLTVRFADPKRPKPGEQPRGGGPAF GGPGVGPRFPTPGIRPPPNIGEPVQGQVGPNAWRPMSPEGFRPVSNQGMHGFGNQFPPRS TDTTVPSALGGSFRSVNGTGNGMLTGIAASSAPTPQLSAQQFPTVGQQISSLQKPLQSPQ HIPSSVQFQPPASTPMSQGPTSNALFGQRNQVQMSHSAGQSPFRQGALSQQSLGLTGQST VSQPQVQRNMTPVIGHTPLSNNMQIHAASANANQQPFQQQSVQHLQQPPSQLAQMLSQQT QTLQASFQSSQQTFTQLQQQLQLMQPSSQNSAVQQGTQDAKQQSAWPGLVQQPAPSATAV QPKADALPATSGMNQTTSLVKCNWTEHTSPDGFKYYYSSTTGESRWEKPEELISYEQQQQ KLSVQQSHNQAQPQGFPSQQVPEMQAQPRSQLPTYIPTQVRPPQLSQQASQATMYPVGMT GQQPIQGIQAAQEWMWKNKPEGG*

Transcript Sequence

Transcript ID	Solyc01g058450.3.1
Transcript Infomation	Flowering time control protein FCA, putative (AHRD V3.3 *** B9RZT3_RICCO)
Sequence	CTAAAAATAAACAATTTTTAATAACAATCCCAAGCGACCTCTTTTATGGAAAGGAGAAGG TACATTGTATGCTCGATAATCGAATCACAGATATCACTTCCGTCATCGACTAAACCCAAA GTACATACATAGCTTCTTCGTTCAGCATAAGTTTAGCACAAACAACTCTAGGGTTTATGA GTCCCCAATTCTCGGACCCTTTTTCTCTATAATCCTCAAGAATACCTGTATTCGTAAATC CAATTTTCCATGGATAGACACAAAGGAGAGAGGTACAACTCAGGCCCATTTCAATACAAG CATTCAAGGGGTCCTCCATCTCCTAGAACTTTTTCTGATGATTCTGGGAACCCTCAACAT CATCATCGTCAAAGTCAGGATGTATACCGTGGCCCCCGTTACCACCGGGCCTTTAATAGC CCTACTCAGCACCCTAGTGATACTGCTGCTACTGGTGGTGGGGTTGAGTCTGGAAGGTTG CATTTAGGTTACCAGATGCCGCCACCGCCTCGTCCTTTTTCGGGGCCTCTTTCAGGGCAA AAACGGGGTTACCCTTCTCCAGAACAAGTTGACGAGGCTGGTTTTGCCAAACTTTTTGTT GGATCTGTCCCAAGAACGGCAACTGAAGAAGATATCCGACCTTTGTTTGAGGAACAAGGA CGAGTACTCGAGGTTGCTTTCATTAAAGATAAGAGAACTGGGCAACAACAAGGATGTTGT TTTATTAAGTATGGTACTTCAGCTGAAGCTGATAGAGCTATAAGAGCATTGCACAATCAA TATACTTTGCCTGGGGGAATTGGTCCTATTCAAGTTAGGTATGCAGATGGTGAACGTGAA CGCCTTGGTGCAGTTGAATACAAGTTATTTGTTGGGTCATTGAACAAACAAGCTACAGAG AAGGAAGTTGAAGAAATATTTTTACCATATGGTCGTGTGGAAGATGTCTATCTCATGCGT GATGATATGAAGCAAAGTCGTGGTTGTGGATTCGTCAAATATTCTAATAGAGATATGGCA ATGGCTGCTATAAACTCTCTGAGTGGAAATTATACAATGAGGGGGTGCGATCAACCTTTA ACTGTTCGGTTTGCTGACCCCAAGAGACCTAAACCTGGAGAACAACCTAGAGGTGGTGGG CCAGCTTTTGGTGGACCTGGTGTTGGACCTCGCTTCCCAACACCTGGGATTAGACCACCA CCTAATATTGGCGAGCCTGTGCAAGGACAAGTTGGTCCTAATGCTTGGCGTCCTATGAGC CCTGAAGGTTTCAGGCCAGTTTCCAACCAAGGGATGCATGGTTTTGGAAATCAATTTCCT CCTAGATCCACTGATACCACAGTGCCTTCTGCTTTGGGTGGCTCCTTCAGGAGTGTTAAT GGCACTGGAAATGGGATGCTTACAGGAATTGCAGCTTCTTCTGCTCCTACACCGCAACTG TCTGCTCAACAATTCCCCACTGTTGGCCAACAAATTTCTTCACTACAAAAGCCACTTCAG TCACCACAGCATATACCATCTTCCGTGCAGTTTCAGCCTCCAGCATCAACACCTATGTCA CAGGGACCAACATCAAATGCTTTGTTTGGGCAGAGAAATCAAGTACAAATGTCCCACTCT GCTGGTCAAAGTCCTTTCCGTCAGGGAGCGCTGTCGCAGCAGTCACTTGGTTTGACTGGG CAATCAACTGTTTCTCAGCCCCAGGTGCAGCGCAATATGACACCTGTCATTGGACATACA CCCTTAAGTAACAACATGCAAATACATGCTGCATCTGCAAATGCAAACCAGCAGCCTTTC CAGCAGCAGTCGGTCCAACATCTTCAACAGCCACCTTCGCAACTAGCACAGATGTTGTCT CAACAGACCCAAACTCTGCAGGCGAGTTTTCAATCATCGCAGCAAACCTTTACTCAGCTT CAGCAACAATTGCAGCTCATGCAACCATCTAGCCAAAACTCAGCAGTCCAGCAGGGCACA CAAGATGCTAAACAACAGTCTGCATGGCCTGGGCTTGTTCAACAACCTGCACCTAGTGCC ACTGCTGTCCAACCAAAAGCAGATGCACTTCCTGCTACATCTGGAATGAACCAGACTACA AGTCTGGTGAAATGTAATTGGACAGAGCACACATCTCCTGATGGATTCAAGTACTATTAC AGCAGTACTACTGGAGAAAGCAGGTGGGAAAAGCCGGAGGAGCTGATATCATATGAACAA CAACAGCAAAAACTGTCAGTCCAACAGTCTCATAATCAGGCTCAACCCCAGGGGTTTCCT TCCCAACAAGTTCCTGAAATGCAAGCACAGCCTCGGAGTCAGCTTCCAACATATATCCCA ACGCAGGTCCGCCCTCCTCAACTATCACAACAAGCTTCTCAAGCTACAATGTACCCAGTT GGAATGACAGGTCAACAACCGATTCAGGGAATTCAAGCTGCTCAGGAGTGGATGTGGAAA AACAAGCCTGAAGGAGGTTGAGTTTTGCAGCTAAGATGATGCATTTAGGTGGAAGCAGAT GTCACAATTTTGTATTGTGCAGCCTGATCTCAAAGGAAATGTAGCATTACTCTGTGAATA TCTTTTACAGTGTTGAGTACACTGCCCTAAGGAGTCCATGGCCAGTCTACGCGATAGCTA TAATGCTTAGAGATTGCCATTGTGTGCCTCAAGGTTTCCAGCATTTCCTTGATAGTCCCT ATTGTGTATCGTCTTATATTTATATTTTTATCAGAGCCCACAGTTGGGTTCGAAGATGTG TAGTCTAGAAATAAACCCCTCCCCAGCAAACCATGTTTGTTGTGTCAACATGGTTCTTTG CCTTGTA