Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g057900.3.1
CDS Infomation	Ubiquitin-protein ligase, putative (AHRD V3.3 *** B9RZW1_RICCO)
Sequence	ATGTTTTTCTCCGGTGATCCTTCGACGAGAAAGCGAGTCGATTTGGGTGGCCGCAGCTCC AAGGAACGTGACCGACAGAAGCTTCTAGAGCAGACTCGTTTAGAGCGGAATCGTCGCCTC TGGTTGCGTCAGCAGAACTCTGCTGCCCTCAAAATTCAGAAATGCTTCAGAGGTAGAAAG GAGGTAGAAACTGAACGTTCTAAAGTTCGCGAGAATTTCTTGAGAACTCATGGGGAACGC TGCCACGCTGTTGACAGGCAGTGCTTCAGTCCAGATTCAGACTTTTTGCGTCACCTACTT TTCTTTTTCAATCCGACATACACTGCTGATGTTTCTGTCCTTGTGGAGACATGCCGATCG CTTCTAGAGTTTGTTCAAGATAACGGGGATGTTATTAGCCTCTTTGCTGGTACAGAATAT GCTTCCAAAGCTGCCTTGGTGAGATATAGAGTGAAGAAATTTGCTCATGCTTGCATTCGG GCTGTTTATGGAAACAGGAATAAGTTAAGAGATCAACTTTTTATGGAATCTGAGAAGTCC TGTACATCAGCAATCCTTTTGTTGGATGCAGTAACATTGTTGATTGATTTAGGGCTTCCT TGGGCTTGCAGCACTGTTACCTATCTTCTTCAAAGAAATATATATTCCTTATTTCGGGAA ATTGTTCTGATTGGCAAGGATAGAAGCTTTCCAGCTTCCAACAGGGTTGTATCTTCATTT GAGCGTGTGCTTGGACTAATTACATCTCATATTGGTCAAGGCACTTGTACTTGCCCAACC GTTGATCCACAATGTTTCTTTCCCTCCCAGATTCTTACAATTCCATTTTTATGGCGGTTT TTCCCTCACCTGAAAGAGATCTTGGCAAGTCCATCAGTGAGTCGTCATTATTTTCATCAG ATGAAATTATGCATGAAAGACCATATTAATGTCCTCCCTCCTGATTTAGCGATTGATCTT CCTGGTTATGCTTGCCTTCTTGGGAATCTATTGGAAGTTGCCGGGCTTGCTTTTGCTCAG CCAGAATCATTCACTATGGCCGTTGATTTTGCTACTGTTGCAACTTTTTTGTTGGAAGCA CTCCCTTCTCTCCAATCATCAAAGATGGGAAGTATAGAAATTTCTGAGGATGAAATGGTC ATTGATGATGAACAAACAGAAAAAGCTCTGAATCTGGGTTTGGAGCAACAGATAACCAAT GCTATAAATCCACGTTTTCTTCTACAGCTGAGTACTGTGTTACTAGGTGGATTTTCACCT CTCAATGGTTTACATAGTGGCCAGCTTGAAGAAAATCACATAGCAGCTGTTACTGCAGTT TGTGCTTTCCTTCATACGACTTTCAACATTTTGCCGCTTGAACGTATTATGACTGTACTA GCCTATCGGACAGAACTAGTTCCTGTCCTTTGGAACTTCATGAAACATTGCCATGAAAAT CAGAAATGGTCATCCTTGTCAGAACAATCACCATATTTTCCAGCAGATGCTCCTGGATGG CTGCTACCTTTATCTGTTTTCTGCCCTGTTTATAAGCACATGCTTATGATTGTTGATAAT GAGGAGTTCTATGAACAGGAGAAGCCGTTGTCTCTGAAGGATATCAGATGCTTAATTGTT ATCCTTAGACAGGCCTTGTGGCAGCTCCTCTGGTTGAACCCTACAGTGCCTGCTAACTTT GGTAAATCAACAACTGCTATTGTTGCTATGAAGAAGCATCCGTTAGAGTTCCTTCAACAC AGGGTCTGTGTTGTAGCATCTGAACTCCTATCACAGTTACAAGATTGGAACAACAGACGG CAATTTACACCTCCTAGTGAATTTCATGCTGATGGTGTAAATGAATATTTCATATCTCAG GCAATGATGGAGAATACTAGAGCCAACGATATACTAAAGCAAGCTCCATTCCTGGTGCCA TTTACTAGCCGAGCCAAAATATTTACTTCACAACTCGCTGAAGCAAGACAAAGGAATGGG AGCCAGGGTCTCTTTGCTAGGCATAGATTCAGAATTAGAAGAGACCATATTCTGGAAGAT GCTTTTAACCAATTGAATGCATTGTCGGAGGAGGATCTACGTGGACTGATACGTGTGACT TTTGTCAACGAACTTGGAGTTGAGGAAGCTGGTATAGATGGTGGTGGGATATTCAAGGAT TTTATGGAGAATATCACTCGAGCAGCTTTTGATGTACAATATGGATTATTTAAGGAAACT GCGGATCATCTACTCTATCCGAATCCTGGGTCTGGACTGATTCATGATCAACACCTCCAG TATTTTCATTTTCTGGGGACAGTTCTTGCAAAGGCAATGTTTGAAGGCATCCTTGTTGAT ATTCCATTTGCAACATTCTTTTTGAGCAAGTTGAAGCAAAAGTATAACTATTTGAATGAT CTTCCTTCCTTGGATCCAGAATTGTATCGCCATCTCATCTTCCTGAAGCATTACGAAGGT GATGTTTCAGATCTTGAGTTGTACTTTGTCATTCTCAACAATGAATATGGAGAGCAAGCG GAAGAAGAGCTGCTTCCTGGTGGTAAAAGCACACGTGTTACTAATGAGAATGTCATCACC TTTATTCATCTTGTTGCTAACCATCGTTTAAACTTTCAGATCCGTCAACAAAGTTCTCAT TTTCTGAGGGGTTTCCAACAGCTAATACAAAAGGAGTGGATTGACATGTTTAATGAACAT GAACTTCAGCTTCTTATTTCTGGATCACTTGATGGCATTGATATTGATGACCTTCGAGCT CATACCAATTATACAGGAGGTTACCACAAGGAACACTATGTTATTGATACGTTTTGGGAG GTTGTGAAAAACTTTTCTTTGGAAAATCAGAGAAAATTTCTGAAGTTTGTGACTGGGTGC TCACGAGGACCCTTACTCGGATTTAAATATTTGGAGCCGTTGTTCTGCATACAGAGAGCG GGTGGGCATGCTTCTGATGAAGCTCTTGATCGTCTGCCGACATCAGCTACTTGCATGAAT CTTTTAAAATTTCCACCATACAGAAGCAAAGAGCAGATGGAGCAGAAATTGTTATACGCC ATAAATGCTGATGCTGGTTTTGATTTAAGCTGA

Peptide Sequence

PEP ID	Solyc01g057900.3.1
PEP Infomation	Ubiquitin-protein ligase, putative (AHRD V3.3 *** B9RZW1_RICCO)
Sequence	MFFSGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRQQNSAALKIQKCFRGRK EVETERSKVRENFLRTHGERCHAVDRQCFSPDSDFLRHLLFFFNPTYTADVSVLVETCRS LLEFVQDNGDVISLFAGTEYASKAALVRYRVKKFAHACIRAVYGNRNKLRDQLFMESEKS CTSAILLLDAVTLLIDLGLPWACSTVTYLLQRNIYSLFREIVLIGKDRSFPASNRVVSSF ERVLGLITSHIGQGTCTCPTVDPQCFFPSQILTIPFLWRFFPHLKEILASPSVSRHYFHQ MKLCMKDHINVLPPDLAIDLPGYACLLGNLLEVAGLAFAQPESFTMAVDFATVATFLLEA LPSLQSSKMGSIEISEDEMVIDDEQTEKALNLGLEQQITNAINPRFLLQLSTVLLGGFSP LNGLHSGQLEENHIAAVTAVCAFLHTTFNILPLERIMTVLAYRTELVPVLWNFMKHCHEN QKWSSLSEQSPYFPADAPGWLLPLSVFCPVYKHMLMIVDNEEFYEQEKPLSLKDIRCLIV ILRQALWQLLWLNPTVPANFGKSTTAIVAMKKHPLEFLQHRVCVVASELLSQLQDWNNRR QFTPPSEFHADGVNEYFISQAMMENTRANDILKQAPFLVPFTSRAKIFTSQLAEARQRNG SQGLFARHRFRIRRDHILEDAFNQLNALSEEDLRGLIRVTFVNELGVEEAGIDGGGIFKD FMENITRAAFDVQYGLFKETADHLLYPNPGSGLIHDQHLQYFHFLGTVLAKAMFEGILVD IPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEGDVSDLELYFVILNNEYGEQA EEELLPGGKSTRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKEWIDMFNEH ELQLLISGSLDGIDIDDLRAHTNYTGGYHKEHYVIDTFWEVVKNFSLENQRKFLKFVTGC SRGPLLGFKYLEPLFCIQRAGGHASDEALDRLPTSATCMNLLKFPPYRSKEQMEQKLLYA INADAGFDLS*

Transcript Sequence

Transcript ID	Solyc01g057900.3.1
Transcript Infomation	Ubiquitin-protein ligase, putative (AHRD V3.3 *** B9RZW1_RICCO)
Sequence	ATTCTCTTGAGTTGAACGAAAAGAACCTAAAGTAAAATATACACCCATTCCCGAGTCCTC CTTTTGTTGCTGCTACTATTTTAAGATCAATTCAACAAAATCTAGATTTATCAATCATAA GAATTATTGTGATTTTTCAAGTATGTTTTTCTCCGGTGATCCTTCGACGAGAAAGCGAGT CGATTTGGGTGGCCGCAGCTCCAAGGAACGTGACCGACAGAAGCTTCTAGAGCAGACTCG TTTAGAGCGGAATCGTCGCCTCTGGTTGCGTCAGCAGAACTCTGCTGCCCTCAAAATTCA GAAATGCTTCAGAGGTAGAAAGGAGGTAGAAACTGAACGTTCTAAAGTTCGCGAGAATTT CTTGAGAACTCATGGGGAACGCTGCCACGCTGTTGACAGGCAGTGCTTCAGTCCAGATTC AGACTTTTTGCGTCACCTACTTTTCTTTTTCAATCCGACATACACTGCTGATGTTTCTGT CCTTGTGGAGACATGCCGATCGCTTCTAGAGTTTGTTCAAGATAACGGGGATGTTATTAG CCTCTTTGCTGGTACAGAATATGCTTCCAAAGCTGCCTTGGTGAGATATAGAGTGAAGAA ATTTGCTCATGCTTGCATTCGGGCTGTTTATGGAAACAGGAATAAGTTAAGAGATCAACT TTTTATGGAATCTGAGAAGTCCTGTACATCAGCAATCCTTTTGTTGGATGCAGTAACATT GTTGATTGATTTAGGGCTTCCTTGGGCTTGCAGCACTGTTACCTATCTTCTTCAAAGAAA TATATATTCCTTATTTCGGGAAATTGTTCTGATTGGCAAGGATAGAAGCTTTCCAGCTTC CAACAGGGTTGTATCTTCATTTGAGCGTGTGCTTGGACTAATTACATCTCATATTGGTCA AGGCACTTGTACTTGCCCAACCGTTGATCCACAATGTTTCTTTCCCTCCCAGATTCTTAC AATTCCATTTTTATGGCGGTTTTTCCCTCACCTGAAAGAGATCTTGGCAAGTCCATCAGT GAGTCGTCATTATTTTCATCAGATGAAATTATGCATGAAAGACCATATTAATGTCCTCCC TCCTGATTTAGCGATTGATCTTCCTGGTTATGCTTGCCTTCTTGGGAATCTATTGGAAGT TGCCGGGCTTGCTTTTGCTCAGCCAGAATCATTCACTATGGCCGTTGATTTTGCTACTGT TGCAACTTTTTTGTTGGAAGCACTCCCTTCTCTCCAATCATCAAAGATGGGAAGTATAGA AATTTCTGAGGATGAAATGGTCATTGATGATGAACAAACAGAAAAAGCTCTGAATCTGGG TTTGGAGCAACAGATAACCAATGCTATAAATCCACGTTTTCTTCTACAGCTGAGTACTGT GTTACTAGGTGGATTTTCACCTCTCAATGGTTTACATAGTGGCCAGCTTGAAGAAAATCA CATAGCAGCTGTTACTGCAGTTTGTGCTTTCCTTCATACGACTTTCAACATTTTGCCGCT TGAACGTATTATGACTGTACTAGCCTATCGGACAGAACTAGTTCCTGTCCTTTGGAACTT CATGAAACATTGCCATGAAAATCAGAAATGGTCATCCTTGTCAGAACAATCACCATATTT TCCAGCAGATGCTCCTGGATGGCTGCTACCTTTATCTGTTTTCTGCCCTGTTTATAAGCA CATGCTTATGATTGTTGATAATGAGGAGTTCTATGAACAGGAGAAGCCGTTGTCTCTGAA GGATATCAGATGCTTAATTGTTATCCTTAGACAGGCCTTGTGGCAGCTCCTCTGGTTGAA CCCTACAGTGCCTGCTAACTTTGGTAAATCAACAACTGCTATTGTTGCTATGAAGAAGCA TCCGTTAGAGTTCCTTCAACACAGGGTCTGTGTTGTAGCATCTGAACTCCTATCACAGTT ACAAGATTGGAACAACAGACGGCAATTTACACCTCCTAGTGAATTTCATGCTGATGGTGT AAATGAATATTTCATATCTCAGGCAATGATGGAGAATACTAGAGCCAACGATATACTAAA GCAAGCTCCATTCCTGGTGCCATTTACTAGCCGAGCCAAAATATTTACTTCACAACTCGC TGAAGCAAGACAAAGGAATGGGAGCCAGGGTCTCTTTGCTAGGCATAGATTCAGAATTAG AAGAGACCATATTCTGGAAGATGCTTTTAACCAATTGAATGCATTGTCGGAGGAGGATCT ACGTGGACTGATACGTGTGACTTTTGTCAACGAACTTGGAGTTGAGGAAGCTGGTATAGA TGGTGGTGGGATATTCAAGGATTTTATGGAGAATATCACTCGAGCAGCTTTTGATGTACA ATATGGATTATTTAAGGAAACTGCGGATCATCTACTCTATCCGAATCCTGGGTCTGGACT GATTCATGATCAACACCTCCAGTATTTTCATTTTCTGGGGACAGTTCTTGCAAAGGCAAT GTTTGAAGGCATCCTTGTTGATATTCCATTTGCAACATTCTTTTTGAGCAAGTTGAAGCA AAAGTATAACTATTTGAATGATCTTCCTTCCTTGGATCCAGAATTGTATCGCCATCTCAT CTTCCTGAAGCATTACGAAGGTGATGTTTCAGATCTTGAGTTGTACTTTGTCATTCTCAA CAATGAATATGGAGAGCAAGCGGAAGAAGAGCTGCTTCCTGGTGGTAAAAGCACACGTGT TACTAATGAGAATGTCATCACCTTTATTCATCTTGTTGCTAACCATCGTTTAAACTTTCA GATCCGTCAACAAAGTTCTCATTTTCTGAGGGGTTTCCAACAGCTAATACAAAAGGAGTG GATTGACATGTTTAATGAACATGAACTTCAGCTTCTTATTTCTGGATCACTTGATGGCAT TGATATTGATGACCTTCGAGCTCATACCAATTATACAGGAGGTTACCACAAGGAACACTA TGTTATTGATACGTTTTGGGAGGTTGTGAAAAACTTTTCTTTGGAAAATCAGAGAAAATT TCTGAAGTTTGTGACTGGGTGCTCACGAGGACCCTTACTCGGATTTAAATATTTGGAGCC GTTGTTCTGCATACAGAGAGCGGGTGGGCATGCTTCTGATGAAGCTCTTGATCGTCTGCC GACATCAGCTACTTGCATGAATCTTTTAAAATTTCCACCATACAGAAGCAAAGAGCAGAT GGAGCAGAAATTGTTATACGCCATAAATGCTGATGCTGGTTTTGATTTAAGCTGATGGAA TTATCTGTGCATGCAATTTTGGAGTATCCGCTTTTTATCTGAAGCAGCTTGTGTTCTTCA TTGGCATAAAGGAAAACACATGAAATGGTATGATCTGTGCACCACCATGGATCATACTGG AAAGGAACTGCTAATTGCTACACAGTCGATGGATGGTCAAGAAGCACGTGTAAATAAGAA CCCCATTACCTACCTTTTGACTAGATGTGCATACATACCCCAGGTGCACTGTATATCATC CTTTGGGAAGTGAATGGCACGCGTGCTAGACATTTCAAACTCGTTGAAAACGAGTGTGTA GTTAAGAATTATTTTGAAACTTGTCGAAGCTTATATATTAGGATGATCATAGTCACCGGA AGTTGTCAACCATTTGTATTCATTGTACAAGTTTATGCATCTCCCACGAGGTGCCCAACT GCAGCTAGTTGTAATATCCTTGAACGGTTAGCTTGCACAGTACTTAATATATATTTATAC TATGATGCGTTGTACCTTGCTAATACACTTTGCGAATGGATCTTG