Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g057830.3.1
CDS Infomation

30S ribosomal protein S1 (AHRD V3.3 *** W9RV42_9ROSA)
Sequence

ATGGCTTCTCTAACACAGCAATTCGTTGGGTTGAAGTGCCCTCCAATGTCGACAACAAGG
CTTGTGAATCCGAGTAATTATCATCACCATCAGAGTAAGCAGAAGCCAAGAATTGTAATA
CAAGCTGCAGCAGTAATCGCAAATGCACAAACAAGAGAAAGACTAAAACTTAAAGAGATG
TTTGAGGATGCCTATGAGAGATGCCGCACTACACCTATGGAAGGTGTTGCCTTTACTGTT
GATGATTTTCACTCTGCCCTTGAAAAATATGATTTTGACTCCGAAGTTGGTACTAAGGTC
AAAGGAACGGTTTTTTCTGTAGATGCAAATGGAGCTCTAGTTGACATAACTGCAAAATCA
TCTGCATACTTGCCTTTACGAGAAGCTTCACTTCACACCATCAGACATGTAGAGGAAGCC
GGAATATTTCCTGGCTTGCGTGAGGAGTTTGTGGTAGTTGGAGAAAATGAAGCTGATGAT
AGTTTGGTTTTGAGTTTGAGATCAATTCAATATGACCTTGCATGGGAGAGATGCAGGCAG
CTTCAAGCTGAAGATGTTGTCATCAAAGGCAAGGTGGTTGGTGCAAATAAAGGTGGAGTG
GTCGCTCTGGTGGAGGGCCTTCGTGGTTTTGTTCCATTCTCCCAGATATCAACGAAATCA
ACTGCGGAGGAGCTTTTGGAAAAAGAGCTTCCTCTGAAGTTTGTTGAGGTTGATGAAGAG
CAATCGAGACTTGTTCTCAGCAATCGTAAGGCCATGGCTGATAGTCAGGCACAATTGGGC
ATAGGCTCAGTTGTTCTTGGAAGTGTTCAGAGCTTGAAACCATATGGTGCCTTCATTGAC
ATTGGTGGGATCAATGGCCTTCTTCATGTGAGCCAGATTAGTCATGATCGTGTCTCAGAT
ATTGCAACAGTCCTCCAGCCTGGTGACACACTTAAGGTCATGATATTGAGCCATGACCGT
GAGAGAGGTCGAGTGAGCCTTTCTACAAAGAAGCTAGAGCCTACACCTGGTGACATGATT
CGCAATCCAAAGCTTGTCTTTGAGAAGGCTGAAGAGATGGCCCAGACATTCAGGCAGAGA
ATTGCCCAAGCTGAAGCCATGGCCCGTGCAGATATGCTGAGATTCCAGCCTGAGAGTGGA
TTGACCCTCAACTCTGACGGGATTTTAGGTCCGCTGACCTCTGAACTACCTGAGGATGGA
CTGGACTTGAGTGAGATTCCACCAGCTGATGATTTATGA

Peptide Sequence

PEP ID

Solyc01g057830.3.1
PEP Infomation

30S ribosomal protein S1 (AHRD V3.3 *** W9RV42_9ROSA)
Sequence

MASLTQQFVGLKCPPMSTTRLVNPSNYHHHQSKQKPRIVIQAAAVIANAQTRERLKLKEM
FEDAYERCRTTPMEGVAFTVDDFHSALEKYDFDSEVGTKVKGTVFSVDANGALVDITAKS
SAYLPLREASLHTIRHVEEAGIFPGLREEFVVVGENEADDSLVLSLRSIQYDLAWERCRQ
LQAEDVVIKGKVVGANKGGVVALVEGLRGFVPFSQISTKSTAEELLEKELPLKFVEVDEE
QSRLVLSNRKAMADSQAQLGIGSVVLGSVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD
IATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQR
IAQAEAMARADMLRFQPESGLTLNSDGILGPLTSELPEDGLDLSEIPPADDL*

Transcript Sequence

Transcript ID

Solyc01g057830.3.1
Transcript Infomation

30S ribosomal protein S1 (AHRD V3.3 *** W9RV42_9ROSA)
Sequence

AGAAGGCATGGTGTGTAACTCAACGAAGTATTCATCTAAGTGAGCGAAAAAATGGCTTCT
CTAACACAGCAATTCGTTGGGTTGAAGTGCCCTCCAATGTCGACAACAAGGCTTGTGAAT
CCGAGTAATTATCATCACCATCAGAGTAAGCAGAAGCCAAGAATTGTAATACAAGCTGCA
GCAGTAATCGCAAATGCACAAACAAGAGAAAGACTAAAACTTAAAGAGATGTTTGAGGAT
GCCTATGAGAGATGCCGCACTACACCTATGGAAGGTGTTGCCTTTACTGTTGATGATTTT
CACTCTGCCCTTGAAAAATATGATTTTGACTCCGAAGTTGGTACTAAGGTCAAAGGAACG
GTTTTTTCTGTAGATGCAAATGGAGCTCTAGTTGACATAACTGCAAAATCATCTGCATAC
TTGCCTTTACGAGAAGCTTCACTTCACACCATCAGACATGTAGAGGAAGCCGGAATATTT
CCTGGCTTGCGTGAGGAGTTTGTGGTAGTTGGAGAAAATGAAGCTGATGATAGTTTGGTT
TTGAGTTTGAGATCAATTCAATATGACCTTGCATGGGAGAGATGCAGGCAGCTTCAAGCT
GAAGATGTTGTCATCAAAGGCAAGGTGGTTGGTGCAAATAAAGGTGGAGTGGTCGCTCTG
GTGGAGGGCCTTCGTGGTTTTGTTCCATTCTCCCAGATATCAACGAAATCAACTGCGGAG
GAGCTTTTGGAAAAAGAGCTTCCTCTGAAGTTTGTTGAGGTTGATGAAGAGCAATCGAGA
CTTGTTCTCAGCAATCGTAAGGCCATGGCTGATAGTCAGGCACAATTGGGCATAGGCTCA
GTTGTTCTTGGAAGTGTTCAGAGCTTGAAACCATATGGTGCCTTCATTGACATTGGTGGG
ATCAATGGCCTTCTTCATGTGAGCCAGATTAGTCATGATCGTGTCTCAGATATTGCAACA
GTCCTCCAGCCTGGTGACACACTTAAGGTCATGATATTGAGCCATGACCGTGAGAGAGGT
CGAGTGAGCCTTTCTACAAAGAAGCTAGAGCCTACACCTGGTGACATGATTCGCAATCCA
AAGCTTGTCTTTGAGAAGGCTGAAGAGATGGCCCAGACATTCAGGCAGAGAATTGCCCAA
GCTGAAGCCATGGCCCGTGCAGATATGCTGAGATTCCAGCCTGAGAGTGGATTGACCCTC
AACTCTGACGGGATTTTAGGTCCGCTGACCTCTGAACTACCTGAGGATGGACTGGACTTG
AGTGAGATTCCACCAGCTGATGATTTATGAGTTCTAAATTAAAACCCGTCGTTTGACCCA
TTTGTTGCATAAGTTGTATAAATAAACATTGTTTGTAGGTTTAGGAACTAAGAATTGTAC
CCGCAGTCATTCTATTGTATTTTATCATATGATCCTCAACTACTTGACTTGCAGTTTTGT
TCTAAGAGAAGCAGCGCTAGCATCAGTAACTATCACAGCATGCTTGGTTTTTTTTACGAT
ATCATGAATTGTCTTAATACTCTTGAGTAAAATGTACCGTTTT