Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g057780.3.1
CDS Infomation

Zinc finger protein (AHRD V3.3 *** W9QKV5_9ROSA)
Sequence

ATGGCTTCGAGGTTCATCTCCCTCCTCGGAACTCCATTTCCCACATTCCTCAATCACCTA
CGATGCCCCTCTTTCCTCCATCTTCGTCGTTTGGCATGCGGTTCTCGTCGCTTCACAGCC
TACAGTCACCCCCACATATCTCCTCTTTCACCCTCTCAACAACAATTCCACGCCCAACCC
ATCAATAATAACACCCCACTCGACTCTTCTTCTTCTTCTTCTTCTTTTACCTCTCACCCT
TGGCCTGAATGGCGTAGCTTAATTACTCTTCTTACTGGCAATGACCAGCTACCTCCTGCA
GTGGAGGACTCTGACTCCTTCGTCACATACGAGGAGTTGTCCCAAGACTTCCTTCGTGCT
GCTACCCTCTGCTTAGATTTTGCACGGGAGCGCCCAAATTTCATAGGGTTGCTTTCAAGG
AGGGATATTGAGGCTGTTGTATCAAATGGGACACCATTTTTGTTCAAAGGTGCTCTGGAA
ACGGCAAGAAGAATGAGGGCATTCTTGGGTATTGACGGGAGCACTGTGCTGGATCATGGC
AACGCTAACACGGTTGATCTCATGAAATACATATTATGTTACGCGAGTAAACCCTCTGTT
TCTTCAGAAAAAAACTCCCTCTATAGCAGGGACCTTATAGAATCATCTTGCCGGAGTCTT
TTGCGTGAGTTGGTTGAAGTGAGCTGCGGAGCTCCAGCAGTCAACCTGCCTCCTGCAGAG
CAATATGATTTTTCAGGTAGATATGGACAAACACCAAGGCCTATTAGACAAAATATTGTA
ATGAAGAGAGGCGACTGGATATGTCAAAAGTGCAATTTCATGAACTTTGCAAGAAACAAC
AAATGCCTTGAATGTGAGGAACCTAGACCAAGGAGACAGCTGACAGGCGGGGAGTGGGAA
TGCCCTCAATGTTATTTCTTCAACTATGGGAGAAATGTTGTCTGTCTGAGATGCGACTTC
GGACGACCAGCTGGGGCTTCACCTAGAACTACCCACTCCAGTGCGGAGGATGGGTATAAT
GGGAACTCTGCGTATTCAAATGGAATGGATCTTAAGTTGGCTGAGAATGAGGAGAAGGCA
CAGCGGTGGTTTTCTAAGATTTCTCAGATGAAGAATGCCTCTGATATGGATAGTGCAGCA
GCTGACGAAGACTTCCCTGAAATAATGCCACCGAGGAAAGGAGAAAATAAGTTTGTTGTT
AGCACAAGGAAAACACCCTTGGAAAGGAGGTTGGCCAACACTCAGTACGAAAGAAACTTT
GGTTACAATGGTATCCCAGAAGGCAACACTTTGACTGGTGGTGCACATAGTGTCCTTGCC
ACGTCAATGAAGCAGAATATGGATCAAAATTCTGGAACAAGTCATAAGGGCGTTGCTGCA
GACAAAAATAGCGAGTCGGTCATTCAACATAGTGGAAGAGGTTCTAACTATGTTCCTTTT
GTGCCATTACCAAAAGACATGTTTCAGAAAAATAATCCAACTTCAGTGATGGATGAGAAA
GTAAAGGAAGAAGTTGGTGTCTCTCACACTCCTGAGGTCAGTCACCAAACATGTTCAGCA
AGTCTTGGCAATGACTTTGGGAAGTCCATGGAGAAGTTCCAGTCAAATGATCTACTCAGT
GAGGAGAAAGAGAGAGAACAAGCTGAGAAGTCAGAAAGTTGGTTCAAGAAAATCGCGGAG
CTGCATGATGTCAAAGACTTATCGAGTTCCATCTCCGATGATGACTTCCCAGAGATTATG
CCAATGCGTAAAGGAGAAAATAGATATGTAGTTAGCAAGAAGAAAGACCGGTCTTTGACT
TCTCCAATGTACAAAAGACAAGTGGCCATGGAGCAAGCAAACAACAGTAGCTTTGTCCCA
TTTGTTCCCTTCCCTCCAGGCTACTTTGCGAAAAGGGACACACAACAGGAAGATATCACA
GGTTCATCCTCTCTGTCTAGGGTTGGAACTTCATCTACATTCAGCAACTCAGATCACAAG
GGATCACCCATGAATCCTCTTTCCAAAACCTATAGTGAGAAGGAAGATGCAGAGAAGACA
CATCATGAGTCGGATGATGCTGGGTTTTTGTTCAGAGATACTATTACTGCACAGACTCCT
GTTGATCAATTCACGAATTCAAGGTTTGCAAGTCCAAGTTTCTCTGGGGATCAGGGGGTC
CCTTGTGTTGGAAATTCAGTTGAAACCTCTCTTGCTTTAGATGCTTGCAGAACTAATAGT
AAAGACAGAAGAAACTCCGTGAACGAGGATGTATCCTTAGCCGAGACTTTGGGAGTAGGT
TCAACCAAGCTGCCTAGAAACCAGAACGTCAGAAATGGATGGACAGGAAAGAGTTTGGAG
GGGTCTGCTGTGAAGGAAACAGATCTGTTAGACATGTCTGAAGAAGCCAAAGCTGAGAGG
TGGTTCCAGCGTGTTGCTCAGATAAAAGACATATCTGAATTGAGTCAGATCCCAGATGAA
GACTTCCCATCTATTATGCCAATGCGCAAGGGAGTTAACAGATTTGTGGTGAGTAAGCGG
AAAACTCCTCTTGAGAGAAGGTTGACATCTACTCAGTACCGGAGAAATCTTCCCGTTGTG
ACTTCTGATCCTATGAAAAGAGAAAGGGACAACAATGATAAATGA

Peptide Sequence

PEP ID

Solyc01g057780.3.1
PEP Infomation

Zinc finger protein (AHRD V3.3 *** W9QKV5_9ROSA)
Sequence

MASRFISLLGTPFPTFLNHLRCPSFLHLRRLACGSRRFTAYSHPHISPLSPSQQQFHAQP
INNNTPLDSSSSSSSFTSHPWPEWRSLITLLTGNDQLPPAVEDSDSFVTYEELSQDFLRA
ATLCLDFARERPNFIGLLSRRDIEAVVSNGTPFLFKGALETARRMRAFLGIDGSTVLDHG
NANTVDLMKYILCYASKPSVSSEKNSLYSRDLIESSCRSLLRELVEVSCGAPAVNLPPAE
QYDFSGRYGQTPRPIRQNIVMKRGDWICQKCNFMNFARNNKCLECEEPRPRRQLTGGEWE
CPQCYFFNYGRNVVCLRCDFGRPAGASPRTTHSSAEDGYNGNSAYSNGMDLKLAENEEKA
QRWFSKISQMKNASDMDSAAADEDFPEIMPPRKGENKFVVSTRKTPLERRLANTQYERNF
GYNGIPEGNTLTGGAHSVLATSMKQNMDQNSGTSHKGVAADKNSESVIQHSGRGSNYVPF
VPLPKDMFQKNNPTSVMDEKVKEEVGVSHTPEVSHQTCSASLGNDFGKSMEKFQSNDLLS
EEKEREQAEKSESWFKKIAELHDVKDLSSSISDDDFPEIMPMRKGENRYVVSKKKDRSLT
SPMYKRQVAMEQANNSSFVPFVPFPPGYFAKRDTQQEDITGSSSLSRVGTSSTFSNSDHK
GSPMNPLSKTYSEKEDAEKTHHESDDAGFLFRDTITAQTPVDQFTNSRFASPSFSGDQGV
PCVGNSVETSLALDACRTNSKDRRNSVNEDVSLAETLGVGSTKLPRNQNVRNGWTGKSLE
GSAVKETDLLDMSEEAKAERWFQRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKR
KTPLERRLTSTQYRRNLPVVTSDPMKRERDNNDK*

Transcript Sequence

Transcript ID

Solyc01g057780.3.1
Transcript Infomation

Zinc finger protein (AHRD V3.3 *** W9QKV5_9ROSA)
Sequence

AAAAAAAATATAATAAAAACATGGTTAAAATGGTTGGCCAAAAAGAGGACCAACCCCAAC
CTCATTTTTATCATCGAATGGTCTGTATTGGCTCAAACTATAGTAGATCCCCCAGGCGAG
AAGCCATCTCCCGTCTCTGTAGAGCGAGGGTTTAGCAAAACCCCAAACATGGCTTCGAGG
TTCATCTCCCTCCTCGGAACTCCATTTCCCACATTCCTCAATCACCTACGATGCCCCTCT
TTCCTCCATCTTCGTCGTTTGGCATGCGGTTCTCGTCGCTTCACAGCCTACAGTCACCCC
CACATATCTCCTCTTTCACCCTCTCAACAACAATTCCACGCCCAACCCATCAATAATAAC
ACCCCACTCGACTCTTCTTCTTCTTCTTCTTCTTTTACCTCTCACCCTTGGCCTGAATGG
CGTAGCTTAATTACTCTTCTTACTGGCAATGACCAGCTACCTCCTGCAGTGGAGGACTCT
GACTCCTTCGTCACATACGAGGAGTTGTCCCAAGACTTCCTTCGTGCTGCTACCCTCTGC
TTAGATTTTGCACGGGAGCGCCCAAATTTCATAGGGTTGCTTTCAAGGAGGGATATTGAG
GCTGTTGTATCAAATGGGACACCATTTTTGTTCAAAGGTGCTCTGGAAACGGCAAGAAGA
ATGAGGGCATTCTTGGGTATTGACGGGAGCACTGTGCTGGATCATGGCAACGCTAACACG
GTTGATCTCATGAAATACATATTATGTTACGCGAGTAAACCCTCTGTTTCTTCAGAAAAA
AACTCCCTCTATAGCAGGGACCTTATAGAATCATCTTGCCGGAGTCTTTTGCGTGAGTTG
GTTGAAGTGAGCTGCGGAGCTCCAGCAGTCAACCTGCCTCCTGCAGAGCAATATGATTTT
TCAGGTAGATATGGACAAACACCAAGGCCTATTAGACAAAATATTGTAATGAAGAGAGGC
GACTGGATATGTCAAAAGTGCAATTTCATGAACTTTGCAAGAAACAACAAATGCCTTGAA
TGTGAGGAACCTAGACCAAGGAGACAGCTGACAGGCGGGGAGTGGGAATGCCCTCAATGT
TATTTCTTCAACTATGGGAGAAATGTTGTCTGTCTGAGATGCGACTTCGGACGACCAGCT
GGGGCTTCACCTAGAACTACCCACTCCAGTGCGGAGGATGGGTATAATGGGAACTCTGCG
TATTCAAATGGAATGGATCTTAAGTTGGCTGAGAATGAGGAGAAGGCACAGCGGTGGTTT
TCTAAGATTTCTCAGATGAAGAATGCCTCTGATATGGATAGTGCAGCAGCTGACGAAGAC
TTCCCTGAAATAATGCCACCGAGGAAAGGAGAAAATAAGTTTGTTGTTAGCACAAGGAAA
ACACCCTTGGAAAGGAGGTTGGCCAACACTCAGTACGAAAGAAACTTTGGTTACAATGGT
ATCCCAGAAGGCAACACTTTGACTGGTGGTGCACATAGTGTCCTTGCCACGTCAATGAAG
CAGAATATGGATCAAAATTCTGGAACAAGTCATAAGGGCGTTGCTGCAGACAAAAATAGC
GAGTCGGTCATTCAACATAGTGGAAGAGGTTCTAACTATGTTCCTTTTGTGCCATTACCA
AAAGACATGTTTCAGAAAAATAATCCAACTTCAGTGATGGATGAGAAAGTAAAGGAAGAA
GTTGGTGTCTCTCACACTCCTGAGGTCAGTCACCAAACATGTTCAGCAAGTCTTGGCAAT
GACTTTGGGAAGTCCATGGAGAAGTTCCAGTCAAATGATCTACTCAGTGAGGAGAAAGAG
AGAGAACAAGCTGAGAAGTCAGAAAGTTGGTTCAAGAAAATCGCGGAGCTGCATGATGTC
AAAGACTTATCGAGTTCCATCTCCGATGATGACTTCCCAGAGATTATGCCAATGCGTAAA
GGAGAAAATAGATATGTAGTTAGCAAGAAGAAAGACCGGTCTTTGACTTCTCCAATGTAC
AAAAGACAAGTGGCCATGGAGCAAGCAAACAACAGTAGCTTTGTCCCATTTGTTCCCTTC
CCTCCAGGCTACTTTGCGAAAAGGGACACACAACAGGAAGATATCACAGGTTCATCCTCT
CTGTCTAGGGTTGGAACTTCATCTACATTCAGCAACTCAGATCACAAGGGATCACCCATG
AATCCTCTTTCCAAAACCTATAGTGAGAAGGAAGATGCAGAGAAGACACATCATGAGTCG
GATGATGCTGGGTTTTTGTTCAGAGATACTATTACTGCACAGACTCCTGTTGATCAATTC
ACGAATTCAAGGTTTGCAAGTCCAAGTTTCTCTGGGGATCAGGGGGTCCCTTGTGTTGGA
AATTCAGTTGAAACCTCTCTTGCTTTAGATGCTTGCAGAACTAATAGTAAAGACAGAAGA
AACTCCGTGAACGAGGATGTATCCTTAGCCGAGACTTTGGGAGTAGGTTCAACCAAGCTG
CCTAGAAACCAGAACGTCAGAAATGGATGGACAGGAAAGAGTTTGGAGGGGTCTGCTGTG
AAGGAAACAGATCTGTTAGACATGTCTGAAGAAGCCAAAGCTGAGAGGTGGTTCCAGCGT
GTTGCTCAGATAAAAGACATATCTGAATTGAGTCAGATCCCAGATGAAGACTTCCCATCT
ATTATGCCAATGCGCAAGGGAGTTAACAGATTTGTGGTGAGTAAGCGGAAAACTCCTCTT
GAGAGAAGGTTGACATCTACTCAGTACCGGAGAAATCTTCCCGTTGTGACTTCTGATCCT
ATGAAAAGAGAAAGGGACAACAATGATAAATGAACCTACACAGATACAGTGCCCAAGGTT
TTGCAAACCAGATTTTTTATAGAGCATTGATGCTAAGGGCTCTATTGGTAGTTGGGTAAG
AAACAAGTTATTT