Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g056340.3.1
CDS Infomation

Light-mediated development protein DET1 (AHRD V3.3 *** DET1_SOLLC)
Sequence

ATGTTCAAAACTAACAATGTTACCGCCAGGCTTTTTGAGCGCCAGATTTGCACCCCTGCT
CCTGGCACCAGCATCCATCGTGCCAGAAGATTTTATGAGAACGTTGTACCAAGTTATACC
ATATACGATGTTGAATGTCCCGACCATTCATTTCGCAAGTTCACGGATGACGGTCTATAT
TTTGTAAGTTTCAGCCGAAACCATCAGGATCTGGTTGTTTATAGACCAACATGGCTGACA
TTTTCCTGCAAAGAAGAAGATTGTGATACTCATGATCTTCCTTTGAAAGCTAGAAAGTTT
GAGAGCTTCTTCACACAGTTGTACAGTGTTACTCTTGCTTCTAGTGGGGAACTTATATGC
AAAGATTTCTTTCTCTATATGGAGAGCAACCAATTTGGACTCTTTGCAACTTCAACTGCA
CAAATTCATGATGCACCTCCTACTGGAGGGGCAATTCAGGGAGTCCCTTCAGTTGAAAAA
ATAACTTTCCACCTTTTGAGGTTGGTGGATGGAGCTATACTTGACGAAAGGGTTTTCCAC
AATGATTATGTTAATTTGGCACATAGCATTGGTGCTTTCTTGTATGATGATTTGCTTGCT
ATAGTGTCTCTTCGTTATCAAAGAATACACATCCTTCAGATCAGAGATTCTGGAGATCTT
GTTGATGTACGAGCAATTGGGGAATTCTGCCGTGAAGATGATGAACTTTTTCTCAATTCC
AATTCCCAGGTGCTTGTAAATCATGTTGGAAATGGTTTTCATCATAGTCTGCCTCAATCA
GAAACTTCTTTCCTGAGCGGTATAAAGCAACGGCTGCTTTCATATATATTTCGAGGTATA
TGGAATGAAGCTGACCAAACCATGAGAGTGCAGTGCCTGAAGAAGAAGTTTTACTTCCAC
TTTCAAGATTACATTGACTTGATTATCTGGAAGGTGCAGTTTTTGGACCGACATCACCTG
TTGATCAAGTTTGGCAGTGTTGATGGTGGGGTATCCCGAAATGCTGACATCCATCCTTCT
TTTTTTGCTGTTTACAATATGGAGACTACTGAAATTGTTGCATTTTATCAGAACTCAGCC
GATGAGCTTTATTTCTTGTTCGAGCTGTTCAGCGACCATTTTCACGTTTCATCCAAAAGT
TCATTACATATGAACTTCATGTCCTCACACTCAAACAACATCCACGCCCTCGAGCAACTA
AGGTGTACAAAGAACAAAGCAACCAATTTCTCTCAATTTGTTAAGAAAATGATGGCTTCC
TTGCCTTGTAGTTGTCAGTCTCAGAGTCCTTCCCCATATTTTGACCAATCTCTCTTCAGG
TTTGACGAGAAGCTTATTTCAGCTATTGACCGCCATAGACAGTCTACTGACCATCCAATC
AAATTCATTTCTAGAAGACAACCCAATATCCTGAAATTCAAAATGAAGCCAGGACCTGAA
GCTGGCAGCACAGATGGGCGAACTAAGAAGATCTGTTCCTTCCTCTTCCACCCAATATTA
CCCCTTGCACTTTCTGTTCAACAAACCTTGTTTCTGCAGGCATCAGTTGTAAATATCCAT
TTTCGTCGATAA

Peptide Sequence

PEP ID

Solyc01g056340.3.1
PEP Infomation

Light-mediated development protein DET1 (AHRD V3.3 *** DET1_SOLLC)
Sequence

MFKTNNVTARLFERQICTPAPGTSIHRARRFYENVVPSYTIYDVECPDHSFRKFTDDGLY
FVSFSRNHQDLVVYRPTWLTFSCKEEDCDTHDLPLKARKFESFFTQLYSVTLASSGELIC
KDFFLYMESNQFGLFATSTAQIHDAPPTGGAIQGVPSVEKITFHLLRLVDGAILDERVFH
NDYVNLAHSIGAFLYDDLLAIVSLRYQRIHILQIRDSGDLVDVRAIGEFCREDDELFLNS
NSQVLVNHVGNGFHHSLPQSETSFLSGIKQRLLSYIFRGIWNEADQTMRVQCLKKKFYFH
FQDYIDLIIWKVQFLDRHHLLIKFGSVDGGVSRNADIHPSFFAVYNMETTEIVAFYQNSA
DELYFLFELFSDHFHVSSKSSLHMNFMSSHSNNIHALEQLRCTKNKATNFSQFVKKMMAS
LPCSCQSQSPSPYFDQSLFRFDEKLISAIDRHRQSTDHPIKFISRRQPNILKFKMKPGPE
AGSTDGRTKKICSFLFHPILPLALSVQQTLFLQASVVNIHFRR*

Transcript Sequence

Transcript ID

Solyc01g056340.3.1
Transcript Infomation

Light-mediated development protein DET1 (AHRD V3.3 *** DET1_SOLLC)
Sequence

CCTTGTTATGAATAAGTAAAGTTTCTTATCTTCCAATCAAAATTCCCCAAACCAAAAAGT
GATTCGTGGAAAGTAGATGTGTAGTATTAATTTTTGGTAGTGGAATTTATCCACTCAAAC
TTTTGGCCTTTCCCGAGTGTTACCGAACAACATACCTTAGCAGCACGCTTCCATCTATTC
ATACACCCTTTGTGCTTGTTGCCCCCATTTCTGCCGCTCCAAATGGTGCCTGCTCAATCT
TTGCCACCACACCCAGCTCTTCCCTCTTAGACTTTATCGATCCTAATTGAGCCCTCCTTT
TTTCAATCAATTATCTAATTTAGTCCTACTGCGATTTTGTATGATTCACAATTTTAATGC
TGCTGAAAGCAATTATATAAAAGCTGAAACATTTTGCACTGATGTTCAAAACTAACAATG
TTACCGCCAGGCTTTTTGAGCGCCAGATTTGCACCCCTGCTCCTGGCACCAGCATCCATC
GTGCCAGAAGATTTTATGAGAACGTTGTACCAAGTTATACCATATACGATGTTGAATGTC
CCGACCATTCATTTCGCAAGTTCACGGATGACGGTCTATATTTTGTAAGTTTCAGCCGAA
ACCATCAGGATCTGGTTGTTTATAGACCAACATGGCTGACATTTTCCTGCAAAGAAGAAG
ATTGTGATACTCATGATCTTCCTTTGAAAGCTAGAAAGTTTGAGAGCTTCTTCACACAGT
TGTACAGTGTTACTCTTGCTTCTAGTGGGGAACTTATATGCAAAGATTTCTTTCTCTATA
TGGAGAGCAACCAATTTGGACTCTTTGCAACTTCAACTGCACAAATTCATGATGCACCTC
CTACTGGAGGGGCAATTCAGGGAGTCCCTTCAGTTGAAAAAATAACTTTCCACCTTTTGA
GGTTGGTGGATGGAGCTATACTTGACGAAAGGGTTTTCCACAATGATTATGTTAATTTGG
CACATAGCATTGGTGCTTTCTTGTATGATGATTTGCTTGCTATAGTGTCTCTTCGTTATC
AAAGAATACACATCCTTCAGATCAGAGATTCTGGAGATCTTGTTGATGTACGAGCAATTG
GGGAATTCTGCCGTGAAGATGATGAACTTTTTCTCAATTCCAATTCCCAGGTGCTTGTAA
ATCATGTTGGAAATGGTTTTCATCATAGTCTGCCTCAATCAGAAACTTCTTTCCTGAGCG
GTATAAAGCAACGGCTGCTTTCATATATATTTCGAGGTATATGGAATGAAGCTGACCAAA
CCATGAGAGTGCAGTGCCTGAAGAAGAAGTTTTACTTCCACTTTCAAGATTACATTGACT
TGATTATCTGGAAGGTGCAGTTTTTGGACCGACATCACCTGTTGATCAAGTTTGGCAGTG
TTGATGGTGGGGTATCCCGAAATGCTGACATCCATCCTTCTTTTTTTGCTGTTTACAATA
TGGAGACTACTGAAATTGTTGCATTTTATCAGAACTCAGCCGATGAGCTTTATTTCTTGT
TCGAGCTGTTCAGCGACCATTTTCACGTTTCATCCAAAAGTTCATTACATATGAACTTCA
TGTCCTCACACTCAAACAACATCCACGCCCTCGAGCAACTAAGGTGTACAAAGAACAAAG
CAACCAATTTCTCTCAATTTGTTAAGAAAATGATGGCTTCCTTGCCTTGTAGTTGTCAGT
CTCAGAGTCCTTCCCCATATTTTGACCAATCTCTCTTCAGGTTTGACGAGAAGCTTATTT
CAGCTATTGACCGCCATAGACAGTCTACTGACCATCCAATCAAATTCATTTCTAGAAGAC
AACCCAATATCCTGAAATTCAAAATGAAGCCAGGACCTGAAGCTGGCAGCACAGATGGGC
GAACTAAGAAGATCTGTTCCTTCCTCTTCCACCCAATATTACCCCTTGCACTTTCTGTTC
AACAAACCTTGTTTCTGCAGGCATCAGTTGTAAATATCCATTTTCGTCGATAATGTAAAA
ACTTAATTTATATGTTACCGATTTGTTTATAAATTTCTCTAATAACCTCTAGATTGAAAT
CAACCTAGAAATCACAAATTCATCATAACAGACCCGTAGATGCTAGTGTCTTTGACTTCT
ACATTTTCTTTGTTACAAGAATCAAACAAATGCTTGATAGAGTGCCAAGACGGTTAGTAT
GGGTATAAGGATTAGTTCTTCTGTAAGTTTTTGTTACAGCTTCTCTTCTAATTAATTGAT
GTACATTCAGATGTTTATTTGTGAGGTAGAAAACTGATGAAGACCCATTTTTGGTTATCT
ATGGATACTGTAGACTATGGTACACAAAATCTTTTACCTGTATCAGCTGCTTTGGGATGT
TTAAGTCAGAATAAAGGAAGATGACATATAACTAGATTTTCCATTCGTT