Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g056310.3.1
CDS Infomation

anther-specific LAT51
Sequence

ATGGGGAGTGGTAAAGTGACAGTTGTGGCTTTGCTACTTTGCCTCTCAGTAGGGGTAATA
GCTGAGGACCCTTACCTCTACTTTAACTGGAACGTTACCTATGGCACAGTCTCTCCATTG
GGCGTGCCACAACAAGGTATTCTCATCAATGGCCAGTTCCCTGGGCCTAGAATTAATTGT
ACCTCCAACAACAACATTGTCGTCAATGTCTTCAATAATTTGGATGAGCCATTCCTATTT
ACCTGGAATGGTGTCCAACATAGGAAGAACTCATGGCAAGATGGTACCCCAGGAACCATG
TGCCCAATCATGCCTGGTCAAAATTTTACTTACCGATTCCAGGTCAAGGACCAGATTGGT
AGCTACTACTACTTCCCTACCACAGCTTTGCACCGAGCAGCAGGTGGTTATGGTGCCATC
AATGTCCACAGTCGTGCTCTCATCCCTGTTCCTTTCGACAATCCTGCCGATGAGTACAAT
GTCTTTGTCGGTGATTGGTACAACAAGGGCCACAAGACTTTGAAAAAGGTCTTGGATGGT
GGACACACCGTTGGCAGACCTGATGGCATCATCATCAATGGTAAGTCTGCTAAGGTTGGA
GAGGCAAAAGAGCCACTCTTTACCATGGAGGCTGGCAAGACCTATAGGTACAGATTCTGT
AACCTTGGCATGAGGTCCTCAGTCAACGTTAGATTACAAGGTCACCCAATGAAATTAGTC
GAGCTAGAGGGATCCCACACCGTACAAAACATCTACGATTCATTGGATATCCATGTTGGT
CAGTGCCTCTCAGTATTGGTGACTGCTAATCAGGAGCCCAAGGACTATTACTTGGTCGTT
TCAAGCAGATTCTTGAAGCAAGAACTCTCCTCTGTGGCCATCATCCGTTATGCCAATGGA
AAGGGCCCAGCATCTCCTGAGCTCCCAGCATCCCCACCAGACAACACTGAAGGCATTGCC
TGGTCCATGAACCAGTTCCGCTCCTTCAGATGGAACTTGACCGCTAGCGCTGCCCGTCCC
AACCCTCAGGGTTCCTACCATTACGGACAGATAAACATCACCCGCACCATCAAGATTGTC
AACTCTATGGGCCAAGTAAATGGTAAGCTTAGATATGGTTTGAACGGCATCTCTCACTCA
GATACCGAAACTCCATTGAAGCTTGTAGAGTACTTTGGAGCTGCCGATAAGAGTTTCAAG
TATGATCTCATGGCTGATGAAGCCCCAGCTGACCCAAGCAAGCTAACTGTTGCCCCAAAT
GTGAAAAACACCACCTACCGTAACTTTGTGGAGATCATCTTTGAGAACCACGAGAAGAGC
ATCAGGACATATCACCTTGATGGATATTCCTTCTTTGCAGTAGCTGTTGAGCCAGGGAGG
TGGAGCGCTGAGAAGAGAAAGAACTACAACTTAGTGGACGCAACAAGCAGGAACAACATC
CAGGTGTATCCAAACTCATGGGCAGCAATAATGTTGACATTTGACAATGCAGGAATGTGG
AACTTGAGGTCAGAGATGTGGGAGAAGACTTATTTGGGAGAGCAAATGTACTTCAGCGTT
CTCTCACCAAGCCGCTCCTTGAGAGATGAATACAACCTCCCTGATAACCATCCTCTCTGC
GGTGTTGTCAAGGGCATGCCCCTCCCAGCTCCATACAAGGCTTAA

Peptide Sequence

PEP ID

Solyc01g056310.3.1
PEP Infomation

anther-specific LAT51
Sequence

MGSGKVTVVALLLCLSVGVIAEDPYLYFNWNVTYGTVSPLGVPQQGILINGQFPGPRINC
TSNNNIVVNVFNNLDEPFLFTWNGVQHRKNSWQDGTPGTMCPIMPGQNFTYRFQVKDQIG
SYYYFPTTALHRAAGGYGAINVHSRALIPVPFDNPADEYNVFVGDWYNKGHKTLKKVLDG
GHTVGRPDGIIINGKSAKVGEAKEPLFTMEAGKTYRYRFCNLGMRSSVNVRLQGHPMKLV
ELEGSHTVQNIYDSLDIHVGQCLSVLVTANQEPKDYYLVVSSRFLKQELSSVAIIRYANG
KGPASPELPASPPDNTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKIV
NSMGQVNGKLRYGLNGISHSDTETPLKLVEYFGAADKSFKYDLMADEAPADPSKLTVAPN
VKNTTYRNFVEIIFENHEKSIRTYHLDGYSFFAVAVEPGRWSAEKRKNYNLVDATSRNNI
QVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQMYFSVLSPSRSLRDEYNLPDNHPLC
GVVKGMPLPAPYKA*

Transcript Sequence

Transcript ID

Solyc01g056310.3.1
Transcript Infomation

anther-specific LAT51
Sequence

ATGGGGAGTGGTAAAGTGACAGTTGTGGCTTTGCTACTTTGCCTCTCAGTAGGGGTAATA
GCTGAGGACCCTTACCTCTACTTTAACTGGAACGTTACCTATGGCACAGTCTCTCCATTG
GGCGTGCCACAACAAGGTATTCTCATCAATGGCCAGTTCCCTGGGCCTAGAATTAATTGT
ACCTCCAACAACAACATTGTCGTCAATGTCTTCAATAATTTGGATGAGCCATTCCTATTT
ACCTGGAATGGTGTCCAACATAGGAAGAACTCATGGCAAGATGGTACCCCAGGAACCATG
TGCCCAATCATGCCTGGTCAAAATTTTACTTACCGATTCCAGGTCAAGGACCAGATTGGT
AGCTACTACTACTTCCCTACCACAGCTTTGCACCGAGCAGCAGGTGGTTATGGTGCCATC
AATGTCCACAGTCGTGCTCTCATCCCTGTTCCTTTCGACAATCCTGCCGATGAGTACAAT
GTCTTTGTCGGTGATTGGTACAACAAGGGCCACAAGACTTTGAAAAAGGTCTTGGATGGT
GGACACACCGTTGGCAGACCTGATGGCATCATCATCAATGGTAAGTCTGCTAAGGTTGGA
GAGGCAAAAGAGCCACTCTTTACCATGGAGGCTGGCAAGACCTATAGGTACAGATTCTGT
AACCTTGGCATGAGGTCCTCAGTCAACGTTAGATTACAAGGTCACCCAATGAAATTAGTC
GAGCTAGAGGGATCCCACACCGTACAAAACATCTACGATTCATTGGATATCCATGTTGGT
CAGTGCCTCTCAGTATTGGTGACTGCTAATCAGGAGCCCAAGGACTATTACTTGGTCGTT
TCAAGCAGATTCTTGAAGCAAGAACTCTCCTCTGTGGCCATCATCCGTTATGCCAATGGA
AAGGGCCCAGCATCTCCTGAGCTCCCAGCATCCCCACCAGACAACACTGAAGGCATTGCC
TGGTCCATGAACCAGTTCCGCTCCTTCAGATGGAACTTGACCGCTAGCGCTGCCCGTCCC
AACCCTCAGGGTTCCTACCATTACGGACAGATAAACATCACCCGCACCATCAAGATTGTC
AACTCTATGGGCCAAGTAAATGGTAAGCTTAGATATGGTTTGAACGGCATCTCTCACTCA
GATACCGAAACTCCATTGAAGCTTGTAGAGTACTTTGGAGCTGCCGATAAGAGTTTCAAG
TATGATCTCATGGCTGATGAAGCCCCAGCTGACCCAAGCAAGCTAACTGTTGCCCCAAAT
GTGAAAAACACCACCTACCGTAACTTTGTGGAGATCATCTTTGAGAACCACGAGAAGAGC
ATCAGGACATATCACCTTGATGGATATTCCTTCTTTGCAGTAGCTGTTGAGCCAGGGAGG
TGGAGCGCTGAGAAGAGAAAGAACTACAACTTAGTGGACGCAACAAGCAGGAACAACATC
CAGGTGTATCCAAACTCATGGGCAGCAATAATGTTGACATTTGACAATGCAGGAATGTGG
AACTTGAGGTCAGAGATGTGGGAGAAGACTTATTTGGGAGAGCAAATGTACTTCAGCGTT
CTCTCACCAAGCCGCTCCTTGAGAGATGAATACAACCTCCCTGATAACCATCCTCTCTGC
GGTGTTGTCAAGGGCATGCCCCTCCCAGCTCCATACAAGGCTTAA