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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g050040.3.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G55530.2)
Sequence

ATGGACGGAAGAGGATTGTCAAGATATTGGTGTCATCATTGTTCAAGGAGGGTGAACCCC
ATGATGGAGGTTGAGTTAAAATGTCCCATTTGTCAACTAGGATTTATTGAAGAAATGGGT
TCAGACGATAATCAGACCCTTTTAGATTCTGATTCTGATCCTGATCATGCTCTCTCACTT
TGGGCACCTATCTTGTTAGGCATGATGAGCAACTCTCGTCGTCGTTCTAGACTTGGGCAT
CTCGAATTTGAAGAAGATGAGGATGATCATACACGTGAAGCCGATACACAACTTGATCCA
GACTTGGCATCTATAATGAATAGGCGTAGGAGGAACTCTGCCACAATTCTCCAGCTCTTA
CAAGGTATTCGTGCTGGAATGTTGGCTGAGTCGGAGAACCCTAATCCTGAGAATGAAAAC
AGGGACACAGGTAGAGAGAACCAACCTATTGGCTCATTGGGTGATTATTTCATTGGTCCT
GGTTTAGACGTGTTGCTGCAACATTTGGCAGAGAATGATCCAAATAGGTATGGTACTCCA
CCAGCTCAAAAAGAAGTTGTAGAGGCATTGCCTGTGGTGACAATTGATGAGACTTTGCAG
TGTTCTGTCTGTTTGGAAGACTTTGAGATTGGGACTGAAGCCAAAGAGATGCCTTGTAGG
CACAAGTTTCATGGTGGCTGCATCTTACCATGGCTGGAGCTTCATAGCACATGTCCAGTC
TGTAGGCACCAGTTGCTCTCTGATGAATCGAAAGTTGAGTCTGATGATGGAAGTGCTAAC
ACAAATGCTCAGAGTAGTAATGGTAATGGTACAAGGTATGAAGATGAGGATACTAGGAAT
GAAAACGGTCGCCGGTTTCCAGTGTCACTTCCGTGGCCTTTGAGTGGCTTGTTTTCAACA
CCAAACTCAGGTAGTAATGGAAATTCATCATCAATGACGTCTTCTGCATCAAATGCAAAC
TCCAATGCTCATATGCATGAGGATTAA

Peptide Sequence

PEP ID

Solyc01g050040.3.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G55530.2)
Sequence

MDGRGLSRYWCHHCSRRVNPMMEVELKCPICQLGFIEEMGSDDNQTLLDSDSDPDHALSL
WAPILLGMMSNSRRRSRLGHLEFEEDEDDHTREADTQLDPDLASIMNRRRRNSATILQLL
QGIRAGMLAESENPNPENENRDTGRENQPIGSLGDYFIGPGLDVLLQHLAENDPNRYGTP
PAQKEVVEALPVVTIDETLQCSVCLEDFEIGTEAKEMPCRHKFHGGCILPWLELHSTCPV
CRHQLLSDESKVESDDGSANTNAQSSNGNGTRYEDEDTRNENGRRFPVSLPWPLSGLFST
PNSGSNGNSSSMTSSASNANSNAHMHED*

Transcript Sequence

Transcript ID

Solyc01g050040.3.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G55530.2)
Sequence

ATGGACGGAAGAGGATTGTCAAGATATTGGTGTCATCATTGTTCAAGGAGGGTGAACCCC
ATGATGGAGGTTGAGTTAAAATGTCCCATTTGTCAACTAGGATTTATTGAAGAAATGGGT
TCAGACGATAATCAGACCCTTTTAGATTCTGATTCTGATCCTGATCATGCTCTCTCACTT
TGGGCACCTATCTTGTTAGGCATGATGAGCAACTCTCGTCGTCGTTCTAGACTTGGGCAT
CTCGAATTTGAAGAAGATGAGGATGATCATACACGTGAAGCCGATACACAACTTGATCCA
GACTTGGCATCTATAATGAATAGGCGTAGGAGGAACTCTGCCACAATTCTCCAGCTCTTA
CAAGGTATTCGTGCTGGAATGTTGGCTGAGTCGGAGAACCCTAATCCTGAGAATGAAAAC
AGGGACACAGGTAGAGAGAACCAACCTATTGGCTCATTGGGTGATTATTTCATTGGTCCT
GGTTTAGACGTGTTGCTGCAACATTTGGCAGAGAATGATCCAAATAGGTATGGTACTCCA
CCAGCTCAAAAAGAAGTTGTAGAGGCATTGCCTGTGGTGACAATTGATGAGACTTTGCAG
TGTTCTGTCTGTTTGGAAGACTTTGAGATTGGGACTGAAGCCAAAGAGATGCCTTGTAGG
CACAAGTTTCATGGTGGCTGCATCTTACCATGGCTGGAGCTTCATAGCACATGTCCAGTC
TGTAGGCACCAGTTGCTCTCTGATGAATCGAAAGTTGAGTCTGATGATGGAAGTGCTAAC
ACAAATGCTCAGAGTAGTAATGGTAATGGTACAAGGTATGAAGATGAGGATACTAGGAAT
GAAAACGGTCGCCGGTTTCCAGTGTCACTTCCGTGGCCTTTGAGTGGCTTGTTTTCAACA
CCAAACTCAGGTAGTAATGGAAATTCATCATCAATGACGTCTTCTGCATCAAATGCAAAC
TCCAATGCTCATATGCATGAGGATTAA