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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g028900.3.1
CDS Infomation

Pyruvate dehydrogenase E1 component subunit beta (AHRD V3.3 *** A0A0K9PF29_ZOSMR)
Sequence

ATGGGTAGCAATTTCAGAAGAATTGGGAAATTGGCTGCAATTTCATCCAAAAATCAAAGT
TGTATGGGATTTTCCTCAACAGTTAACAAAAATGACACTTCCACCAAATCTGTCAACCTT
TTCTCTGCTATTAATCAAGCTCTTCACATCGCTTTAGACTCTGATCCTCGTTCTTATGTA
TTTGGAGAAGATGTTGGTTTTGGTGGTGTCTTTCGTTGCACTACTGGGCTAGCTGACCGA
TTTGGTAAACAGAGGGTCTTTAACACTCCTCTGTGTGAGCAGGGCATAGTTGGATTTGCG
ATTGGTCTTGCTGCAATGGACAATCGAGCTGTAGCAGAAATTCAATTTGCAGATTATATA
TTTCCTGCTTTTGATCAGATTGTCAATGAAGCTGCGAAATTCAGATACCGGAGTGGTAAC
CAGTTCAACTGCGGAGGTTTAACTATAAGAGCACCTTATGGAGCTGTTGGACATGGTGGG
CATTACCACTCTCAATCCCCTGAATCTTTCTTCTGCCATGTTCCTGGTATAAAGGTGGTC
ATCCCACGCAGTCCACAGCAAGCAAAAGGATTGCTGTTGTCAAGCATACGTGACCCAAAT
CCAGTTGTTTTTTTTGAACCAAAGTTGCTTTACCGGATGGCTGTTGAAGAAGTTCCTAAA
GATGATTATATGTTGCCTCTATCTGAGGCAGAGGTCCTCAGGGAAGGTACTGATATCACA
TTAGTTGGTTGGGGAGCTCAGCTATCTATTATGGAGCAGGCATGTGTAGAAGCTGCAAAG
GAGGGGATCTCTTGTGAACTGATAGACCTTAAAACTTTAATACCTTGGGACAAGGAAACG
GTAGAGGCCTCTGTCAAAAAGACAGGAAGGCTGCTGATTAGTCATGAAGCTCCTGTGACA
GGTGGATTTGGTGCTGAAATATCTGCATCTATAGTTGAACGTTGCTTCACGAGATTAGAA
GCTCCAGTGGCCAGAGTGTGTGGGTTAGATACTCCTTTTCCTCTGGTGTTTGAGCCCTTC
TACTTGCCTACAACGAACAAGATACTGGATGCAATCAAATCTACTGTGAGTTACTAG

Peptide Sequence

PEP ID

Solyc01g028900.3.1
PEP Infomation

Pyruvate dehydrogenase E1 component subunit beta (AHRD V3.3 *** A0A0K9PF29_ZOSMR)
Sequence

MGSNFRRIGKLAAISSKNQSCMGFSSTVNKNDTSTKSVNLFSAINQALHIALDSDPRSYV
FGEDVGFGGVFRCTTGLADRFGKQRVFNTPLCEQGIVGFAIGLAAMDNRAVAEIQFADYI
FPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGAVGHGGHYHSQSPESFFCHVPGIKVV
IPRSPQQAKGLLLSSIRDPNPVVFFEPKLLYRMAVEEVPKDDYMLPLSEAEVLREGTDIT
LVGWGAQLSIMEQACVEAAKEGISCELIDLKTLIPWDKETVEASVKKTGRLLISHEAPVT
GGFGAEISASIVERCFTRLEAPVARVCGLDTPFPLVFEPFYLPTTNKILDAIKSTVSY*

Transcript Sequence

Transcript ID

Solyc01g028900.3.1
Transcript Infomation

Pyruvate dehydrogenase E1 component subunit beta (AHRD V3.3 *** A0A0K9PF29_ZOSMR)
Sequence

TATCTAATAGTATAATGAGTAAAGTGAAATATACTAAATAATATTAAAGGATAATCGTGA
AAAATGCGCATGTTATTTACGTTCCATTTTATTATTACTTTATATTTATAAATAAAGAGA
CATTGAATTGGGGAGTGCATACCCAACTCTATAATAGATGCTTTGACTTTGAATCTCAAT
TGTGCTTCTCTTGTTCAGATTCCAACATTCTTGAGAGAAAGTTCAAAGAAAATGGGTAGC
AATTTCAGAAGAATTGGGAAATTGGCTGCAATTTCATCCAAAAATCAAAGTTGTATGGGA
TTTTCCTCAACAGTTAACAAAAATGACACTTCCACCAAATCTGTCAACCTTTTCTCTGCT
ATTAATCAAGCTCTTCACATCGCTTTAGACTCTGATCCTCGTTCTTATGTATTTGGAGAA
GATGTTGGTTTTGGTGGTGTCTTTCGTTGCACTACTGGGCTAGCTGACCGATTTGGTAAA
CAGAGGGTCTTTAACACTCCTCTGTGTGAGCAGGGCATAGTTGGATTTGCGATTGGTCTT
GCTGCAATGGACAATCGAGCTGTAGCAGAAATTCAATTTGCAGATTATATATTTCCTGCT
TTTGATCAGATTGTCAATGAAGCTGCGAAATTCAGATACCGGAGTGGTAACCAGTTCAAC
TGCGGAGGTTTAACTATAAGAGCACCTTATGGAGCTGTTGGACATGGTGGGCATTACCAC
TCTCAATCCCCTGAATCTTTCTTCTGCCATGTTCCTGGTATAAAGGTGGTCATCCCACGC
AGTCCACAGCAAGCAAAAGGATTGCTGTTGTCAAGCATACGTGACCCAAATCCAGTTGTT
TTTTTTGAACCAAAGTTGCTTTACCGGATGGCTGTTGAAGAAGTTCCTAAAGATGATTAT
ATGTTGCCTCTATCTGAGGCAGAGGTCCTCAGGGAAGGTACTGATATCACATTAGTTGGT
TGGGGAGCTCAGCTATCTATTATGGAGCAGGCATGTGTAGAAGCTGCAAAGGAGGGGATC
TCTTGTGAACTGATAGACCTTAAAACTTTAATACCTTGGGACAAGGAAACGGTAGAGGCC
TCTGTCAAAAAGACAGGAAGGCTGCTGATTAGTCATGAAGCTCCTGTGACAGGTGGATTT
GGTGCTGAAATATCTGCATCTATAGTTGAACGTTGCTTCACGAGATTAGAAGCTCCAGTG
GCCAGAGTGTGTGGGTTAGATACTCCTTTTCCTCTGGTGTTTGAGCCCTTCTACTTGCCT
ACAACGAACAAGATACTGGATGCAATCAAATCTACTGTGAGTTACTAGTGCTCATTCAGT
CGTGCAGAGATGCTGGAGTGTTATAGTAGTGAATATATATATGTATTGCCATAGATTATG
ATTCGGGGTTTCTCTATTAACATACATATATAAAACACTGTTATTAATAGCTTATGCAAC
CAAAAAAGGTCATGTATTTATTTACTCCTCTGGCACTTGGCTCACTGCTCACTGCTTTCT
GTTTGGTGCACAAGGGTACGCTGCTTGCTTTGTTGAATCATAGGTTATCCTGTTGTCA