Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g028830.3.1
CDS Infomation

Protein kinase (AHRD V3.3 *** C6ZRP4_SOYBN)
Sequence

ATGGGAAATTGCTGCTGTAGGGGTCAACCTTCAATATACAGAGTCTCTTCTAATGCAAAA
TCTGAGTCTCCAAAGGATAAAAGTCCATCTCAAAATGCAAGGATGGATCACACTAAGATG
CCTTCGAACCCTGAAGAAGTAGAAGACCTGCGTCGTAGCTCAGCTACAAATCCATTGATT
GCATTCTCCTTTGATGAACTTAAGATAATAACATGCAACTTTAGACAAGATTACATGCTC
GGTGGAGGAGGATTCGGAAATGTTTATAAAGGATATATTACTGAAGATTTGAGGGAAGGA
CTCCAGCCAATTACAGTAGCTGTTAAGGTTCATGATGGGGATAATAGTTATCAGGGACAC
AGGGAATGGCTGGCTGAAGTGATATTTCTCGGCCAACTTTCGCACCCAAATTTAGTAAAG
TTGATTGGTTACTGCTGTGAAGCTGAACATCGAGTTCTTATATACGAGTATATGGCTCGG
GGAAGTGTTGAAAACAATTTGTTCTCAAGAGTATTGCTTCCTCTTCCGTGGTCCATTAGA
ATGAAGATTGCCTTTGGCGCAGCTAAGGGGCTCGCATTTCTGCATGAAGCTGAAAAACCT
GTTATCTATCGAGATTTTAAGACATCTAATATCCTGTTAGATCTGGAGTACAATACAAAA
CTCTCTGATTTTGGGCTAGCTAAAGATGGACCAGTTGGTGACAAATCTCATGTTTCTACT
CGCATAATGGGAACCTATGGATATGCTGCCCCTGAATATATTATGACAGGTCATTTGACT
CCTAGGAGTGATGTTTATAGTTTTGGAGTTGTTCTTCTCGAGCTTCTAACGGGAAGAAGA
TCACTTGATAAATCGAAACCAGCCCGAGAACAAAACCTTACAGATTGGGCAGTACCATTG
CTTAGAGAAAAGAAAAAACTGCTCAATATTATAGATCCAAGACTTGATGGAGATTATCCC
ATAAAATCTGTTCATAAGGCTGCAATGCTTGCTTATCATTGCCTAAATCGCAACCCGAAA
GCACGACCTTTAATGAGAGACATTGTAGATTCCTTAGAGCCTCTTCAGATACCTGGTGAA
GTTCCAACAAGTGAGAAGCCTACTTTGACTGTGATCACTGATACGCCAAATGGAGTTATC
AAAGAGAAGGTGCAAACTTGA

Peptide Sequence

PEP ID

Solyc01g028830.3.1
PEP Infomation

Protein kinase (AHRD V3.3 *** C6ZRP4_SOYBN)
Sequence

MGNCCCRGQPSIYRVSSNAKSESPKDKSPSQNARMDHTKMPSNPEEVEDLRRSSATNPLI
AFSFDELKIITCNFRQDYMLGGGGFGNVYKGYITEDLREGLQPITVAVKVHDGDNSYQGH
REWLAEVIFLGQLSHPNLVKLIGYCCEAEHRVLIYEYMARGSVENNLFSRVLLPLPWSIR
MKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLEYNTKLSDFGLAKDGPVGDKSHVST
RIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRRSLDKSKPAREQNLTDWAVPL
LREKKKLLNIIDPRLDGDYPIKSVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQIPGE
VPTSEKPTLTVITDTPNGVIKEKVQT*

Transcript Sequence

Transcript ID

Solyc01g028830.3.1
Transcript Infomation

Protein kinase (AHRD V3.3 *** C6ZRP4_SOYBN)
Sequence

TTACTCCCCTTGATCCTAAATTTTTATATAGTACTTTTTATATTTCCTTAGTTATGTGAT
AAAAATATGAATGTGTAGTGCGGAGGCCGTAGGACCCAACAGAAATATTGAAAAGGAAAG
GCGCACAACTCTATTTGTTGTGTGCTACAGACAACACAACACCACTTCCACTTTCTTACT
TTTTTCTCAAATCCATTTTCATTTCACACACAAATTACTTTCTTCATCTTCTTCTTCTTG
GGGGTTTGGTTAATTCTGTTGTTTCATTTTTAGTAATAATCATGGGTGGTTGTTGAGATA
CAAAGTTAGGGGTTTTATACTATAATAAATGGGAAATTGCTGCTGTAGGGGTCAACCTTC
AATATACAGAGTCTCTTCTAATGCAAAATCTGAGTCTCCAAAGGATAAAAGTCCATCTCA
AAATGCAAGGATGGATCACACTAAGATGCCTTCGAACCCTGAAGAAGTAGAAGACCTGCG
TCGTAGCTCAGCTACAAATCCATTGATTGCATTCTCCTTTGATGAACTTAAGATAATAAC
ATGCAACTTTAGACAAGATTACATGCTCGGTGGAGGAGGATTCGGAAATGTTTATAAAGG
ATATATTACTGAAGATTTGAGGGAAGGACTCCAGCCAATTACAGTAGCTGTTAAGGTTCA
TGATGGGGATAATAGTTATCAGGGACACAGGGAATGGCTGGCTGAAGTGATATTTCTCGG
CCAACTTTCGCACCCAAATTTAGTAAAGTTGATTGGTTACTGCTGTGAAGCTGAACATCG
AGTTCTTATATACGAGTATATGGCTCGGGGAAGTGTTGAAAACAATTTGTTCTCAAGAGT
ATTGCTTCCTCTTCCGTGGTCCATTAGAATGAAGATTGCCTTTGGCGCAGCTAAGGGGCT
CGCATTTCTGCATGAAGCTGAAAAACCTGTTATCTATCGAGATTTTAAGACATCTAATAT
CCTGTTAGATCTGGAGTACAATACAAAACTCTCTGATTTTGGGCTAGCTAAAGATGGACC
AGTTGGTGACAAATCTCATGTTTCTACTCGCATAATGGGAACCTATGGATATGCTGCCCC
TGAATATATTATGACAGGTCATTTGACTCCTAGGAGTGATGTTTATAGTTTTGGAGTTGT
TCTTCTCGAGCTTCTAACGGGAAGAAGATCACTTGATAAATCGAAACCAGCCCGAGAACA
AAACCTTACAGATTGGGCAGTACCATTGCTTAGAGAAAAGAAAAAACTGCTCAATATTAT
AGATCCAAGACTTGATGGAGATTATCCCATAAAATCTGTTCATAAGGCTGCAATGCTTGC
TTATCATTGCCTAAATCGCAACCCGAAAGCACGACCTTTAATGAGAGACATTGTAGATTC
CTTAGAGCCTCTTCAGATACCTGGTGAAGTTCCAACAAGTGAGAAGCCTACTTTGACTGT
GATCACTGATACGCCAAATGGAGTTATCAAAGAGAAGGTGCAAACTTGAACATGATTACA
AGGTTTTCTAACTTCCCTAGCATTAATAGAATGATTTGATACAATATTTTACTTTCCTGT
AATGCATTACAATGTTTGGCTTTTTGGTAATACAAATAAACACACTATTTATTTAGTCTC
CCAATTTAATAGCAGTTTTCAATTCTATTTATCATACCGTTAATGGCCCTTCTACACTTA
AATACCAAACTTTTATACATCAAGTTGTTAACAAGATTGTGTATGAGCTCGATAGTGATG
ACGCAAAGGAAAAAATGGAAGTGTATTTTGAAGTTGGCAGGTAGAGAGTTGAAGTTTATT
GTTGATGACAATGGTTTTACTGAATCATCAAGCATTTACTATTCCAACTATCAGAATGAG
TTGGACAAAAAGCGTTAAAAATCAAGTCTCAGTCTTACTCCCACTCACAAAGGGGTGGGG
ATTAAAAAGGACTTTTGGAAGTAAAAATAAGAGAATATGCCACAAGTTTTAACTAGGTGG
TACAAGATCTATTTTTTAAAAAGAATTAGTGTTTGCAAGTATGCACTATGCTCCTTTTAA
AAATGTTTTTTGTAAATCCAAAGTTTTTCTACTAACACAGACCTAACTAAGAAAAGTGGT
TATCTTCTTTTTTTAAAAAAATCAAAAGTGCAAGAAAACAATCTTAGCACATCACTATCT
TTTAAACGACTTGATCTTCTCAAACAAGGTTTTATTTCCCTTCATTCTACAAAAAATTAA
TTCATCATTGAGCAACTTTTTTTAATTAGTATGTATTGCTTTTTTGTTCTTTGTGAATCC
ATAGCTTGAATATTACTTCAATGGCCAAGGGGGATAAATAATTTATTTATGTGATGTAAG
GCATAGGCGGAGTCAGGATTTATGTTACTGGGTTCTAGTTTTATTTTTTATAACCCCCCC
CCCCATTTATATATATACACACACGCATTCTAGTTTTTTTTATATATAAAATGCAACTTT
TTTTGTATAACCCACCTATTCCACACAATTGTTTTT