Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g020240.3.1
CDS Infomation

THUMP domain-containing protein 1 (AHRD V3.3 *** A0A1D1ZBW7_9ARAE)
Sequence

ATGGAGAAAAGTGACATTCTCTCACTTGTTAAGTTAACGAGAAGCGGATTAGTTCTCCTT
AAACTTCCATTCGACAAGTCTCCAGCAGTTGTTGACATTGTTTCACAGATTTTTCAATCC
CTAGAATCTGGAATATTGAAGTCTCCTCTTTGGTGCAATCGGATATTACCAATTCAAGGT
ACATGCTGTTTAGATGAGAAGGAACTTAAGAAGATTGTGACAAAGCTTGTTGAGCAGTTT
ATGAACAATAGGCAGGAGACAGGAGACACTGTTAAGTTTGCAGTTGGGTATAACAGGAGA
GGGATTGAAGAAACCGAGATGAAGAATCTAAGAAACACTTCCAGTGATCCTGATATATTT
GCTTTGTTGGATCGCAACAAATGCTTTAGCGTCGTAGCAGCAGCAGTGAAAGAAGTCGTC
CCAGATTCGATAGTGGATTTGAAAGATCCAGAGATCTGTGTGCTTGTTGAGGTACTTCCA
TTGTCTGGAGTACCAGATAGGACAGCCATAGTTGGTGTATCAGTTCTTCCTCGAGCACTT
GTTACTACGAAGCCTCGACTCTGCATCAAGGCCTTAGTCTCGGATACAAAAGAAACGAAT
AAGAAGAAAAGATAA

Peptide Sequence

PEP ID

Solyc01g020240.3.1
PEP Infomation

THUMP domain-containing protein 1 (AHRD V3.3 *** A0A1D1ZBW7_9ARAE)
Sequence

MEKSDILSLVKLTRSGLVLLKLPFDKSPAVVDIVSQIFQSLESGILKSPLWCNRILPIQG
TCCLDEKELKKIVTKLVEQFMNNRQETGDTVKFAVGYNRRGIEETEMKNLRNTSSDPDIF
ALLDRNKCFSVVAAAVKEVVPDSIVDLKDPEICVLVEVLPLSGVPDRTAIVGVSVLPRAL
VTTKPRLCIKALVSDTKETNKKKR*

Transcript Sequence

Transcript ID

Solyc01g020240.3.1
Transcript Infomation

THUMP domain-containing protein 1 (AHRD V3.3 *** A0A1D1ZBW7_9ARAE)
Sequence

CCATGGGAGCAGCATTCTTCTGTGATAAGCATCCCTCGTTTCGATTACAACGCTTCTTCT
TCCTTACTCCGCCATTCGCATTCTGGGTTTCTCATTACATGCCCAATCAAAAGGGAAAAA
AGTGCAACGAAAGAAGCTATAAGTATCCTTGAAAAGTATATTGTTTCAAATCATGATGCT
AAGCGAAGGAAAACATGTGTAGATGATGTTAATGAAGAATGTAAAGGATCAAGAGAAGGC
GCAGCTAATGAACATGTGAATTCGGAATCTGGTACCTCTATGGAGAAAAGTGACATTCTC
TCACTTGTTAAGTTAACGAGAAGCGGATTAGTTCTCCTTAAACTTCCATTCGACAAGTCT
CCAGCAGTTGTTGACATTGTTTCACAGATTTTTCAATCCCTAGAATCTGGAATATTGAAG
TCTCCTCTTTGGTGCAATCGGATATTACCAATTCAAGGTACATGCTGTTTAGATGAGAAG
GAACTTAAGAAGATTGTGACAAAGCTTGTTGAGCAGTTTATGAACAATAGGCAGGAGACA
GGAGACACTGTTAAGTTTGCAGTTGGGTATAACAGGAGAGGGATTGAAGAAACCGAGATG
AAGAATCTAAGAAACACTTCCAGTGATCCTGATATATTTGCTTTGTTGGATCGCAACAAA
TGCTTTAGCGTCGTAGCAGCAGCAGTGAAAGAAGTCGTCCCAGATTCGATAGTGGATTTG
AAAGATCCAGAGATCTGTGTGCTTGTTGAGGTACTTCCATTGTCTGGAGTACCAGATAGG
ACAGCCATAGTTGGTGTATCAGTTCTTCCTCGAGCACTTGTTACTACGAAGCCTCGACTC
TGCATCAAGGCCTTAGTCTCGGATACAAAAGAAACGAATAAGAAGAAAAGATAACGGTCT
CTTCAAGAACAGGACGTATATTTGAAACTTTCTGTCCGTTTTTGTTATTTTGCTAGTAGA
GATTCTTATGCTAGTAAGAGTATGGAGAACTGATAGTACTTATCATTTTTATTTGTGTTT
AATTACAACTCGGTGTATGTCCTACTGTACTCTCTCCAGACATAGATATCGTTAGTTCTT
GTTTAAGCTTGAAGTTAGTAATATAAATTTAGGGGT