Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g014840.3.1
CDS Infomation	disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT5G17680.2)
Sequence	ATGTCTTCTATTTGCCCACAAAATTGGAAGAATGATGTTTTCTTGAGTTTTAGAGGTAAA GATACGCGTAAAACTTTTGTTGGTCATCTCAACTATGCTCTAAAACAAAAAGGAATTCAT ACATTCAAAGATGATGAAAGATTGGAAAGAGGAAAAACCATTTCACCTGAACTTGTTAAA GCTATTGAAGAATCAAGATTTGCTATTGTTGTATTCTCTAAGAATTATGCATCATCCACT TGGTGTTTAGATGAACTTGTGAAGATCATGGAATGTAAAAAAGAATTAGGACAAACTGTG ATACCTATATTCTATGATGTAGATCCATCACATGTAACTAAACAAAGTGAAACTTTTGCT AAATCCTTTGCTATACATGAGGAAAATTTGAAAGATGATGTTGAGAAGGTGTTATGCTGG AGGGATGCATTTCGTCAAGCAGGCAAAATAGCTGGATATGATTTGCCAAATGGCTATGAC GGGTATGAATCTAATTGCATTCAGCATGTAGTTGAAGGCATACTGAGTAAATTATGTCAA GTTATTTCAACCATAGAAAATGATTTGGTGGGGATGGAATCTCGAGTGCAGGAAGTAAGT TCATTACTAAGGATGGAAACACTCGATGTTCGTTTTATTGGAATTTGGGGGATGGGAGGC ATTGGTAAGACAACAATTGCAAGAGCTGTGTTTGGCAAATATTGGGGCCAATTTGAAGGA GTTTGTTTTCTGGATAATGTTGTAGAAATGCAAAAGACACATGGACTGCAATATCTGCAA GGTGTTCTCCTCTCGAAAATCCTCAAAGTAAGTATAACTATAGCAAGTGTGTATGAAGGC ATGAGAATCATAAAGGAAAGACTACGCTCGATGAAAGTTTTGATCATTCTTGATGATGTA ATTCAAAAGGACCAATTAGAAATGTTAGTTGGAGGGCGTGATTGGTTTGGTATCGGCAGT AGAATTTTGATTACTACAACAGATAAACATTTGTTACATAATCATGTGGTGGATGAAGTG TATTCAGTCAACTTGATGACTCGCGATGAAGCGATAGAGCTATTCAGCCTACACGCCTTT AAGCAAAGAATTCCAGATAAAGATTTTGAGGAGCTATTAAATCAAGTTGTACAGACTGCC GGTTTTCTCCCTTTAGCTCTGAAAATTCTAGGTTCGTCTCTCTGCGGGCTAGACAAGATT GTGTGGAAATGCACAGTGGACAGACTTAAGGATATGCCAGATGATGTTCTTGCTAAGCTT AAGATAAGTTTTGATGGGCTGAGTCCTTCTGATCAGAGACTATTTCTTGATATCGGATGC TTTTATAGAGGAAAATTGAGGAGTTCTGTAGGGGAAATGCTTGAGAGTTGTGATATTGGA TCTACAATAAGAGTCTTGATTGAAAAGTCTCTCTTATTTGTCTCACCATATGACACAATC GAAATGCATGATTTGATACAAGAAATGGCCTGGCACATCGTGAGACAAGGCGACACAAGA AGGAGCAGAATATGGCTTCCCGAGGACATCGAGGATTTGTTTACTGGAAATTTGGAGGCA GAAGCTGTGGAGGGCCTATCGATCCCAAGGGATTACGTACGAAAACGGGATATATCATGT TACAACATAAATGAAACATTCAGGAAAATGAAAAGATTAAGGGTGCTTGAAGTAAGAGCA ACAAATTTCTGCTCTATTGATCCGATCACTCATCTTCCTAGCAGCATAAGGTGGCTTGAT TGGGAAGGTTGCCCTTTAAATTCATTGCCACAGAGTTTTGAACCTTCAAAGCTTCTTCGT CTCGATATACTTGAAAGTACTACACTCCAGAAGCTCTGGTCAATTTCAAAGGGATTGGAC AAACTTAAGGCTTTGTACCTCAGCTACTGTGAGAAGTTGGAAGAAGTTCCAAGCTTCGAT ATAATGCCAAATTTAGAGAGAGTAAAGCTAGAGGGATGTAACAGTTTGAGAGAAGTCAGC CCATCTTTTGGAGTTCTCATGAAACTCACTTCAATGGAGCTAATTGATTGTCCGAGCCTC AAGAAAATTCCAAGTTGTGTTGAGATGGGATCCCTTAAGAGTCTCAAACTTTCTTGTCTT CCAAAATTGAGGGAATTGCCAGAAACCAAGGGGATGCACCGTTTATTGACGTTAGAGCTG ACTAACTGTCAATACCTTGAGAAGCTTCCAAATTTTGATCAGATGGAATCCCTTGAGACT CTCAAACTTTCTTGTCTTCCAAAAGTCACTATATTTCCGCCACCAGACGGAATGCACTGT TTACAGGACATTGTTATCGAATATGTCCCGATAGTAGAGCTTCCAGCATCAATCGGGAAT CTTCGTTCCCTCAAACAACTTAGATTAAGTCATTGTAAAGATCTAGTAAGCATTCCAAAC AGCTTTTGTTGTCTGAAGAATCTAAGAGCCCTTCTTATCTACAATTGCAAAAGACTAATC TATTTGCCAGAAAAGATTGGTGACTTGAAACTGTTAAAGAAGCTAGTAGTATCTGGTACT TCAATTTCCCAGATACCAACTTCAGTTACAGATCTTCGTGAGCTAAGCTTCTTATCGTTT TCTCGTTGGTCTGGATACAGACAAGGTGCAACTTTTCTGTTCCCGCCTTCATCAGGTGTA TCGTTGCCGTTGAGGGTGTTAAAGCTAAAAAAAAACAGGCTATGTAGTGCAGAACATTTT CCAGATGTTGGAGGTTTATCTTCGTTAGCTCACTTGGATTTGACTAGAAATGATGAGAGT ACCAATCAACTCTTTCATTACTTAGACATAACATTTTGTGAGAAGCTTGCATTGCCTGAA CTTCCGCCATTTATAAAGGAGTTATATGCATGTGATCCTCTAATCTTGAAAAGCATCCCT GATTTCCTTACCAAATATTCAGATCTCTATTCAGTGTCATTCACTCGCCATATCGAGAAC AAAGGTGAACTGACTGATTTATTGCTTTTTGTCCTCCGCATGATTAGTGTGGCATCTCAG TGTGAGAAAAGGCCGCCCTTGAGCCTTTTCTTCCCTGGAGATATAAAATGGAAATGGTTC ACTTATTATCGGAAAGAACAAACGAAAAGATTCTCCACTCAACTTGATCCACGTTGGTAC GAAAGTAAATTCATCAAAGGATTTGTTTTATGCTTTCGTGTACCATCGGTGATTGGTCAG AACCAGAAATGTTCAAATGATAAATCACAACGAGGTAGTAGTCGTAGGTTCGGATGCACT AAGGTTACTGCCAAGTTAGTGCAAAGATATAACAGGCAAGAACATGATGTACTCCAGAAA AAATGTCTGATTGTTGCTCGCCAAACTTTTTGCTCTCATGGTAGTAAATACTCCATTTGT TTTAACTACATACCTTTTGTAGCATGTGAGAAAGGGAAGAAGCTGCTAAATGAGTATTGC TTCTTCGAGGCATCGTTAGAACCAGACATTGCAACAAAATGGGGGCTTCTTCTGGTGTAT GAGAAGAAAATTCAACAGATAGATCAATCAACCATCGCGGTCCAATGTGATGTTGATTCT CCGAATTCTGATCTGTTTAGAGAATGTAATGATGACCAAGGCCACAGAAAAGAAGATGTT TCTGTTAAGAGAAGACGCCTTGATCTTCGTCAAGTGATGAAGGATTCGTGCTCCACCAGC ATAGTTCCTGATCAACAAATGGAAACACCAAGCTCTTCTGCAGCACAAAGCTTCCAGCAT AGGGATGAGTCATGCTCTTCAGGACAGCCCCAAACTACACAGATCCCTCAAGCTGATGAT CCGCGAGTTGATGAAGCAATAGATGAGGCTACCTCATGTGTGGTAGTTGACCAGCCTGAC GTTTTTGATGTCTCTCCAGATGAGCACAAAGATAATTCAATGACAACTGGTTCTGGCTGC TCTGTAGTATCCCAACAATTGGAGACACAATGCACTTCTGGAAAATCTCAAACTCTCCGG CTCTTCCCCGATCATTCATGA

Peptide Sequence

PEP ID	Solyc01g014840.3.1
PEP Infomation	disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT5G17680.2)
Sequence	MSSICPQNWKNDVFLSFRGKDTRKTFVGHLNYALKQKGIHTFKDDERLERGKTISPELVK AIEESRFAIVVFSKNYASSTWCLDELVKIMECKKELGQTVIPIFYDVDPSHVTKQSETFA KSFAIHEENLKDDVEKVLCWRDAFRQAGKIAGYDLPNGYDGYESNCIQHVVEGILSKLCQ VISTIENDLVGMESRVQEVSSLLRMETLDVRFIGIWGMGGIGKTTIARAVFGKYWGQFEG VCFLDNVVEMQKTHGLQYLQGVLLSKILKVSITIASVYEGMRIIKERLRSMKVLIILDDV IQKDQLEMLVGGRDWFGIGSRILITTTDKHLLHNHVVDEVYSVNLMTRDEAIELFSLHAF KQRIPDKDFEELLNQVVQTAGFLPLALKILGSSLCGLDKIVWKCTVDRLKDMPDDVLAKL KISFDGLSPSDQRLFLDIGCFYRGKLRSSVGEMLESCDIGSTIRVLIEKSLLFVSPYDTI EMHDLIQEMAWHIVRQGDTRRSRIWLPEDIEDLFTGNLEAEAVEGLSIPRDYVRKRDISC YNINETFRKMKRLRVLEVRATNFCSIDPITHLPSSIRWLDWEGCPLNSLPQSFEPSKLLR LDILESTTLQKLWSISKGLDKLKALYLSYCEKLEEVPSFDIMPNLERVKLEGCNSLREVS PSFGVLMKLTSMELIDCPSLKKIPSCVEMGSLKSLKLSCLPKLRELPETKGMHRLLTLEL TNCQYLEKLPNFDQMESLETLKLSCLPKVTIFPPPDGMHCLQDIVIEYVPIVELPASIGN LRSLKQLRLSHCKDLVSIPNSFCCLKNLRALLIYNCKRLIYLPEKIGDLKLLKKLVVSGT SISQIPTSVTDLRELSFLSFSRWSGYRQGATFLFPPSSGVSLPLRVLKLKKNRLCSAEHF PDVGGLSSLAHLDLTRNDESTNQLFHYLDITFCEKLALPELPPFIKELYACDPLILKSIP DFLTKYSDLYSVSFTRHIENKGELTDLLLFVLRMISVASQCEKRPPLSLFFPGDIKWKWF TYYRKEQTKRFSTQLDPRWYESKFIKGFVLCFRVPSVIGQNQKCSNDKSQRGSSRRFGCT KVTAKLVQRYNRQEHDVLQKKCLIVARQTFCSHGSKYSICFNYIPFVACEKGKKLLNEYC FFEASLEPDIATKWGLLLVYEKKIQQIDQSTIAVQCDVDSPNSDLFRECNDDQGHRKEDV SVKRRRLDLRQVMKDSCSTSIVPDQQMETPSSSAAQSFQHRDESCSSGQPQTTQIPQADD PRVDEAIDEATSCVVVDQPDVFDVSPDEHKDNSMTTGSGCSVVSQQLETQCTSGKSQTLR LFPDHS*

Transcript Sequence

Transcript ID	Solyc01g014840.3.1
Transcript Infomation	disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT5G17680.2)
Sequence	ATGTCTTCTATTTGCCCACAAAATTGGAAGAATGATGTTTTCTTGAGTTTTAGAGGTAAA GATACGCGTAAAACTTTTGTTGGTCATCTCAACTATGCTCTAAAACAAAAAGGAATTCAT ACATTCAAAGATGATGAAAGATTGGAAAGAGGAAAAACCATTTCACCTGAACTTGTTAAA GCTATTGAAGAATCAAGATTTGCTATTGTTGTATTCTCTAAGAATTATGCATCATCCACT TGGTGTTTAGATGAACTTGTGAAGATCATGGAATGTAAAAAAGAATTAGGACAAACTGTG ATACCTATATTCTATGATGTAGATCCATCACATGTAACTAAACAAAGTGAAACTTTTGCT AAATCCTTTGCTATACATGAGGAAAATTTGAAAGATGATGTTGAGAAGGTGTTATGCTGG AGGGATGCATTTCGTCAAGCAGGCAAAATAGCTGGATATGATTTGCCAAATGGCTATGAC GGGTATGAATCTAATTGCATTCAGCATGTAGTTGAAGGCATACTGAGTAAATTATGTCAA GTTATTTCAACCATAGAAAATGATTTGGTGGGGATGGAATCTCGAGTGCAGGAAGTAAGT TCATTACTAAGGATGGAAACACTCGATGTTCGTTTTATTGGAATTTGGGGGATGGGAGGC ATTGGTAAGACAACAATTGCAAGAGCTGTGTTTGGCAAATATTGGGGCCAATTTGAAGGA GTTTGTTTTCTGGATAATGTTGTAGAAATGCAAAAGACACATGGACTGCAATATCTGCAA GGTGTTCTCCTCTCGAAAATCCTCAAAGTAAGTATAACTATAGCAAGTGTGTATGAAGGC ATGAGAATCATAAAGGAAAGACTACGCTCGATGAAAGTTTTGATCATTCTTGATGATGTA ATTCAAAAGGACCAATTAGAAATGTTAGTTGGAGGGCGTGATTGGTTTGGTATCGGCAGT AGAATTTTGATTACTACAACAGATAAACATTTGTTACATAATCATGTGGTGGATGAAGTG TATTCAGTCAACTTGATGACTCGCGATGAAGCGATAGAGCTATTCAGCCTACACGCCTTT AAGCAAAGAATTCCAGATAAAGATTTTGAGGAGCTATTAAATCAAGTTGTACAGACTGCC GGTTTTCTCCCTTTAGCTCTGAAAATTCTAGGTTCGTCTCTCTGCGGGCTAGACAAGATT GTGTGGAAATGCACAGTGGACAGACTTAAGGATATGCCAGATGATGTTCTTGCTAAGCTT AAGATAAGTTTTGATGGGCTGAGTCCTTCTGATCAGAGACTATTTCTTGATATCGGATGC TTTTATAGAGGAAAATTGAGGAGTTCTGTAGGGGAAATGCTTGAGAGTTGTGATATTGGA TCTACAATAAGAGTCTTGATTGAAAAGTCTCTCTTATTTGTCTCACCATATGACACAATC GAAATGCATGATTTGATACAAGAAATGGCCTGGCACATCGTGAGACAAGGCGACACAAGA AGGAGCAGAATATGGCTTCCCGAGGACATCGAGGATTTGTTTACTGGAAATTTGGAGGCA GAAGCTGTGGAGGGCCTATCGATCCCAAGGGATTACGTACGAAAACGGGATATATCATGT TACAACATAAATGAAACATTCAGGAAAATGAAAAGATTAAGGGTGCTTGAAGTAAGAGCA ACAAATTTCTGCTCTATTGATCCGATCACTCATCTTCCTAGCAGCATAAGGTGGCTTGAT TGGGAAGGTTGCCCTTTAAATTCATTGCCACAGAGTTTTGAACCTTCAAAGCTTCTTCGT CTCGATATACTTGAAAGTACTACACTCCAGAAGCTCTGGTCAATTTCAAAGGGATTGGAC AAACTTAAGGCTTTGTACCTCAGCTACTGTGAGAAGTTGGAAGAAGTTCCAAGCTTCGAT ATAATGCCAAATTTAGAGAGAGTAAAGCTAGAGGGATGTAACAGTTTGAGAGAAGTCAGC CCATCTTTTGGAGTTCTCATGAAACTCACTTCAATGGAGCTAATTGATTGTCCGAGCCTC AAGAAAATTCCAAGTTGTGTTGAGATGGGATCCCTTAAGAGTCTCAAACTTTCTTGTCTT CCAAAATTGAGGGAATTGCCAGAAACCAAGGGGATGCACCGTTTATTGACGTTAGAGCTG ACTAACTGTCAATACCTTGAGAAGCTTCCAAATTTTGATCAGATGGAATCCCTTGAGACT CTCAAACTTTCTTGTCTTCCAAAAGTCACTATATTTCCGCCACCAGACGGAATGCACTGT TTACAGGACATTGTTATCGAATATGTCCCGATAGTAGAGCTTCCAGCATCAATCGGGAAT CTTCGTTCCCTCAAACAACTTAGATTAAGTCATTGTAAAGATCTAGTAAGCATTCCAAAC AGCTTTTGTTGTCTGAAGAATCTAAGAGCCCTTCTTATCTACAATTGCAAAAGACTAATC TATTTGCCAGAAAAGATTGGTGACTTGAAACTGTTAAAGAAGCTAGTAGTATCTGGTACT TCAATTTCCCAGATACCAACTTCAGTTACAGATCTTCGTGAGCTAAGCTTCTTATCGTTT TCTCGTTGGTCTGGATACAGACAAGGTGCAACTTTTCTGTTCCCGCCTTCATCAGGTGTA TCGTTGCCGTTGAGGGTGTTAAAGCTAAAAAAAAACAGGCTATGTAGTGCAGAACATTTT CCAGATGTTGGAGGTTTATCTTCGTTAGCTCACTTGGATTTGACTAGAAATGATGAGAGT ACCAATCAACTCTTTCATTACTTAGACATAACATTTTGTGAGAAGCTTGCATTGCCTGAA CTTCCGCCATTTATAAAGGAGTTATATGCATGTGATCCTCTAATCTTGAAAAGCATCCCT GATTTCCTTACCAAATATTCAGATCTCTATTCAGTGTCATTCACTCGCCATATCGAGAAC AAAGGTGAACTGACTGATTTATTGCTTTTTGTCCTCCGCATGATTAGTGTGGCATCTCAG TGTGAGAAAAGGCCGCCCTTGAGCCTTTTCTTCCCTGGAGATATAAAATGGAAATGGTTC ACTTATTATCGGAAAGAACAAACGAAAAGATTCTCCACTCAACTTGATCCACGTTGGTAC GAAAGTAAATTCATCAAAGGATTTGTTTTATGCTTTCGTGTACCATCGGTGATTGGTCAG AACCAGAAATGTTCAAATGATAAATCACAACGAGGTAGTAGTCGTAGGTTCGGATGCACT AAGGTTACTGCCAAGTTAGTGCAAAGATATAACAGGCAAGAACATGATGTACTCCAGAAA AAATGTCTGATTGTTGCTCGCCAAACTTTTTGCTCTCATGGTAGTAAATACTCCATTTGT TTTAACTACATACCTTTTGTAGCATGTGAGAAAGGGAAGAAGCTGCTAAATGAGTATTGC TTCTTCGAGGCATCGTTAGAACCAGACATTGCAACAAAATGGGGGCTTCTTCTGGTGTAT GAGAAGAAAATTCAACAGATAGATCAATCAACCATCGCGGTCCAATGTGATGTTGATTCT CCGAATTCTGATCTGTTTAGAGAATGTAATGATGACCAAGGCCACAGAAAAGAAGATGTT TCTGTTAAGAGAAGACGCCTTGATCTTCGTCAAGTGATGAAGGATTCGTGCTCCACCAGC ATAGTTCCTGATCAACAAATGGAAACACCAAGCTCTTCTGCAGCACAAAGCTTCCAGCAT AGGGATGAGTCATGCTCTTCAGGACAGCCCCAAACTACACAGATCCCTCAAGCTGATGAT CCGCGAGTTGATGAAGCAATAGATGAGGCTACCTCATGTGTGGTAGTTGACCAGCCTGAC GTTTTTGATGTCTCTCCAGATGAGCACAAAGATAATTCAATGACAACTGGTTCTGGCTGC TCTGTAGTATCCCAACAATTGGAGACACAATGCACTTCTGGAAAATCTCAAACTCTCCGG CTCTTCCCCGATCATTCATGACTTAGAAATATCGATGGACCTCTTGGTTTGCATCCCAAC AATTGGAGACACAATGCACTTCTGGACAATCCCAAACTCTCCGGCTCTTCCCCGATCATT CCTGACTTAGAAATATCGATGGACCTCTTGGTTTGCATCCCAACAATTGGAGACACAGTG CACTTCTGGACAATCTCAAACTCTCCGGCTCTTCCCCGATCATTCATGACTTAGAATTAT CGATGGACCTCTCAGTTTGCTGGCCCAAAGGCAACAAATGGCAGGATGTTCAAGGTTGGG GTGAAGCTTTTGGTGAAATCTTATGTTTTTCTGCATTCTGGTTAGGTGTGTCCATCTCCT CTTCTTCTTTTTTATCCTCATGCTACCTTT