Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g014490.3.1
CDS Infomation

DNA topoisomerase 6 subunit B (AHRD V3.3 *** K4AU86_SOLLC)
Sequence

ATGTTCTCTTCAGTTTCACCTCATTCATGTATTGAAAGCAAACTTAATCAAATAATTCCA
AAATATTGCATTATATGCGACAAATGGCTGTCATCACGCCCTATGCCCAATTCCTTTTCC
AATTTGAAAAATGTGACTATAAGGTTCACCAGAAGAACAGACATAATGCCTTCAGTTCCT
CTTGAGACCAAGTACCATCCATCAGCTGTGGACATACTTCTTATCAAACGGCTTATAACG
GAAACATCAAAGCAGACTCTTTTGCAGTTCCTTCAGCATGAATTTGTAAACATTGGAAAG
TCTCATGCGGAACGTTTGATCGGGGAGATGGGTCCAGATTTTAGCCCAAAAATGTCAGTT
AAATCTCTAACACCACAGCAAATAGTTCGCATCCATCAGTTGTTTCGTCAAGCCAAATTT
GATGATCCCAGTGGTGATATTTTAAGTCCCGCTGGAGAATATAATCTACGTCTTGGCATT
ATAAAGGAGCTGCACCCAGATATGGTTGCAACCTTTTCAGGAAGTGCTCAAGTATTCGAA
GGTCATCCATTTATCGTGGAAGCTGGAGTTAGTGTTGGTGGGAAAGATGTCAAACAAGGG
CTGAATGTTTTCCGATTTGCTAATCGGATTCCACTTCTTTTTGAGCAAGGTGCTGATGTT
GTTACAAGGACTGCTATGAAGAGAATCAATTACAAGATCAACCAAACACAAGACAAAATT
GGTGTCTTTGTGAGCATTGTTAGCACCAAAATCCCCTTTAAAGGGACTGGCAAGGAGTAT
ATTGGAGATGACATAAGTGAGATTGCTTCTGCTGTCAAGACAGCTATTAAGCAATGCTGC
AATCAGCTCAAATCAAAAATTGTAAAAAGGATTCATGCTCGTGAGCAGCAGGAAAGGAAG
CGGAATTTGAGCAAGTATATTCCTAGTGCTACCGCTGCTATATATGATCTCCTAAAACAG
ACGACAAATGTGCATGCATCAAAAAAGAGACGCTTCAGGGATGACAATGCTGACCTACTA
AAACAAGTTTCAGTTAATTCATTAACAAAAGATACATTCAGAGAAAAGCTTGCTCAGCAT
GTCGAAAAGGTGGACTACGAAATGGGTTTGGAATATGCCACACAGACCGGAGTGAATGAA
GAACCACGGGAAGAGATATACATAGAGTCACTGAATGAAGATAAGAACTTCCTAGACCTC
CAGAGCCCTATATTTGTCTTCAGATTCTATCACTAG

Peptide Sequence

PEP ID

Solyc01g014490.3.1
PEP Infomation

DNA topoisomerase 6 subunit B (AHRD V3.3 *** K4AU86_SOLLC)
Sequence

MFSSVSPHSCIESKLNQIIPKYCIICDKWLSSRPMPNSFSNLKNVTIRFTRRTDIMPSVP
LETKYHPSAVDILLIKRLITETSKQTLLQFLQHEFVNIGKSHAERLIGEMGPDFSPKMSV
KSLTPQQIVRIHQLFRQAKFDDPSGDILSPAGEYNLRLGIIKELHPDMVATFSGSAQVFE
GHPFIVEAGVSVGGKDVKQGLNVFRFANRIPLLFEQGADVVTRTAMKRINYKINQTQDKI
GVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKTAIKQCCNQLKSKIVKRIHAREQQERK
RNLSKYIPSATAAIYDLLKQTTNVHASKKRRFRDDNADLLKQVSVNSLTKDTFREKLAQH
VEKVDYEMGLEYATQTGVNEEPREEIYIESLNEDKNFLDLQSPIFVFRFYH*

Transcript Sequence

Transcript ID

Solyc01g014490.3.1
Transcript Infomation

DNA topoisomerase 6 subunit B (AHRD V3.3 *** K4AU86_SOLLC)
Sequence

ATGTTCTCTTCAGTTTCACCTCATTCATGTATTGAAAGCAAACTTAATCAAATAATTCCA
AAATATTGCATTATATGCGACAAATGGCTGTCATCACGCCCTATGCCCAATTCCTTTTCC
AATTTGAAAAATGTGACTATAAGGTTCACCAGAAGAACAGACATAATGCCTTCAGTTCCT
CTTGAGACCAAGTACCATCCATCAGCTGTGGACATACTTCTTATCAAACGGCTTATAACG
GAAACATCAAAGCAGACTCTTTTGCAGTTCCTTCAGCATGAATTTGTAAACATTGGAAAG
TCTCATGCGGAACGTTTGATCGGGGAGATGGGTCCAGATTTTAGCCCAAAAATGTCAGTT
AAATCTCTAACACCACAGCAAATAGTTCGCATCCATCAGTTGTTTCGTCAAGCCAAATTT
GATGATCCCAGTGGTGATATTTTAAGTCCCGCTGGAGAATATAATCTACGTCTTGGCATT
ATAAAGGAGCTGCACCCAGATATGGTTGCAACCTTTTCAGGAAGTGCTCAAGTATTCGAA
GGTCATCCATTTATCGTGGAAGCTGGAGTTAGTGTTGGTGGGAAAGATGTCAAACAAGGG
CTGAATGTTTTCCGATTTGCTAATCGGATTCCACTTCTTTTTGAGCAAGGTGCTGATGTT
GTTACAAGGACTGCTATGAAGAGAATCAATTACAAGATCAACCAAACACAAGACAAAATT
GGTGTCTTTGTGAGCATTGTTAGCACCAAAATCCCCTTTAAAGGGACTGGCAAGGAGTAT
ATTGGAGATGACATAAGTGAGATTGCTTCTGCTGTCAAGACAGCTATTAAGCAATGCTGC
AATCAGCTCAAATCAAAAATTGTAAAAAGGATTCATGCTCGTGAGCAGCAGGAAAGGAAG
CGGAATTTGAGCAAGTATATTCCTAGTGCTACCGCTGCTATATATGATCTCCTAAAACAG
ACGACAAATGTGCATGCATCAAAAAAGAGACGCTTCAGGGATGACAATGCTGACCTACTA
AAACAAGTTTCAGTTAATTCATTAACAAAAGATACATTCAGAGAAAAGCTTGCTCAGCAT
GTCGAAAAGGTGGACTACGAAATGGGTTTGGAATATGCCACACAGACCGGAGTGAATGAA
GAACCACGGGAAGAGATATACATAGAGTCACTGAATGAAGATAAGAACTTCCTAGACCTC
CAGAGCCCTATATTTGTCTTCAGATTCTATCACTAGTTATTCACTAGATGGATTTTCATA
GGAATGTGTTGTTTCTAATATTATTTTTCATTTTGATTTTTATCAATTAAATTATAGAAA
TTCTAGAGGCGTAGAGGATAACAAGGCAGAAATGTATTATGATAGGAAGAGAAAGTGCAA
CTTATTGCACCTATGTTTACCTTATTGTTTGAAGTAAAGCTTTGATAGTTCAGATCTTGA
GTTTATCAATTATAGTTGAACTTTAGATGCTTCTTTTAATAAAATAGATGTGTTTTGAAT
GGTGCCTA