Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g010410.3.1
CDS Infomation

Zinc finger family protein (AHRD V3.3 *** B9HID5_POPTR)
Sequence

ATGGAAGGATATCAAGATTTGAAGTTTGTGTGCAAATGGTGTAACAAAAAGTACCCATGT
GGGAAGTCACTTGGAGGACACATAAAGTGTCATGTAGTTGATGAAAAATTTGAAACTGCT
AAGTTGAAAAAGAAGGAATCTTGGAATATTAGTAGTGGAAAGAATCAATCGAGTGGTAGT
TATGTTCTTAGAGAGAATCCCAAGAAAACTTGGAGGTTTGAGGATTCTAACCTATATTGG
TCGGACTCTCCAAAAATAATAACAAACAACACTCGCACTACTTTTGGAGAATCTGACACG
CATCCGAACAACATAGATTCTAAGTATACCGCAGCTCAAGAAAAAGTGTGTCAGCAATGT
GGAAAGGGCTTTCCATCCATGAAAGCTTTGTGTGGTCATATGGCTTGTCATTCAGAAAAA
GATAAAGGGGGTTTGAAAGATGATGATGACGACGACGACGATGATAACTCATGGACTAGT
AGTGATCATAGCCATTCAGATACTGAAGCTGGTGAGCTAATCAGTCAAAGTTGTAGATCA
AAGACTACTAAGAGATACAACAAAATTGTAGTTAAGTCGAATAATTATAATTGTTCGTCT
TCTGTGTCTGAGATTGATCAAGTTCAAGAACAAGAAGAATTAGCCAAGTGTTTGATAATG
TTGTCAAGGGATTCTAGGTCTTGGAATGGTGTTGATTCACTTGTGGAGACTTCTGATAAC
AATTCTGCTATTTTAGAGACTAAACCGTCGTCTAGTGACATGAGGAATAATGCTAGAAAG
AACGGTGTTAAACGTGTATACAATCAAGATGAAAAGCCTCGAATGAAGAAAGAGGGAGAC
ACAATCACGAAGATTGATATGTTGGAAGGTGAAACTCAATCCGAGAACTCTGATTCAGAC
TACTACTTAGGCGAAAATGGGAATATCGAATCAGATGGCTCTGTTGAGAGGTACTTAGGA
AATGGTAAAGGAAAATGGAATACCTCTAAAATGAGTTTTGCAGCTTGGTTAAACGAGAAT
TTGAGTGACGAGAAAAATGGAATAAACAGAATCAAACAATATATAACAGAGTCAAGGAAG
AATTTGGGTAAGAAATGTGAACGCGATGGCTATGGATTAGCCTCAAATTCGTATATATGT
GAATCGAAAAAGAGAGCCATGGATCCATATAATGATCTAGAGATAAGGAATGACTCCAAG
AAGATGAAGTTGTGTGTTAAGAGTCCTGAAGGATACAAGAATGATATACATAAGACGAGA
AAATACGAGTGTTTGAACTGCAAGAAGGTGTTTAGCTCATATCAGGCACTTGGTGGACAT
AGACCGTGCCACAAAAAGGTCCACGATTATTCTGAATCAACGTATGAAACTGGTGAGAAT
AGCCTTGGTGCTGATCATAATGATCCTAAATGCACAAAACTTGGCAAGCATAGGGACGTT
TTTCGCAACAAAAAACAAGTAGTTCCTTCTCAAGATTTGCCTTATGAACCCGAGATAAAG
GTTAAAACGAAGAAATCCAAAGGACACAAATGCCCGTTTTGCTATAGGATGTTTAAGTCT
GGTCAAGCTTTAGGTGGACACAAAAGGTCACATTTTATTAATGGTAGTGATCAGGAGAAT
CTCAATCAACAATCATCAGCTGTAAAGCGCGAAGTTGTTGACTTACTCGATCTTAATCTT
CCTGCTCCGGTAGATGAGGAGGACGAAGAACATGCTCGATACATGTCCTGGTAG

Peptide Sequence

PEP ID

Solyc01g010410.3.1
PEP Infomation

Zinc finger family protein (AHRD V3.3 *** B9HID5_POPTR)
Sequence

MEGYQDLKFVCKWCNKKYPCGKSLGGHIKCHVVDEKFETAKLKKKESWNISSGKNQSSGS
YVLRENPKKTWRFEDSNLYWSDSPKIITNNTRTTFGESDTHPNNIDSKYTAAQEKVCQQC
GKGFPSMKALCGHMACHSEKDKGGLKDDDDDDDDDNSWTSSDHSHSDTEAGELISQSCRS
KTTKRYNKIVVKSNNYNCSSSVSEIDQVQEQEELAKCLIMLSRDSRSWNGVDSLVETSDN
NSAILETKPSSSDMRNNARKNGVKRVYNQDEKPRMKKEGDTITKIDMLEGETQSENSDSD
YYLGENGNIESDGSVERYLGNGKGKWNTSKMSFAAWLNENLSDEKNGINRIKQYITESRK
NLGKKCERDGYGLASNSYICESKKRAMDPYNDLEIRNDSKKMKLCVKSPEGYKNDIHKTR
KYECLNCKKVFSSYQALGGHRPCHKKVHDYSESTYETGENSLGADHNDPKCTKLGKHRDV
FRNKKQVVPSQDLPYEPEIKVKTKKSKGHKCPFCYRMFKSGQALGGHKRSHFINGSDQEN
LNQQSSAVKREVVDLLDLNLPAPVDEEDEEHARYMSW*

Transcript Sequence

Transcript ID

Solyc01g010410.3.1
Transcript Infomation

Zinc finger family protein (AHRD V3.3 *** B9HID5_POPTR)
Sequence

GTGATTTATTCTTCTAAGTCTCCTGAATATTTGCTACTTTTATGGCTATTGCTACTTGCT
AGTGATCCATTTGTTCAAAATTTATTTTTTTTCTAAATAGGATTCTTGAAATCTTAATTA
ATAAGATTTAACACCCCATTCCTCTTCCTCTTCTCTCTTACCTTTTTGTTCTGTGGGTTA
ACATCTTGTTACTTGGTAAAAAATTCCATTTGTATCACTGGATCCTAAAGAAGATTTGGC
TTTTTTTCAAAATTTTGTTCTTTTTTTTGTTTGTTTCCTTCGATCTGAGATTCTGTATTT
TTTACTTTTTGTGGGATTCCACTGTCTTTTTTGGAATTCTGCACGGCAGAGGAGTCAGAC
TTCTCACCAATTCCTCTATCTGTGCAGCCACAGAGTCAGAATTCTCACTATTTCTTTGTT
TTTTTGGAATTCGTCGGAATTACAGTGACATTATTTAAGTTTTTACTTTGGTGTAATTGT
TACTTAGATAATGGAAGGATATCAAGATTTGAAGTTTGTGTGCAAATGGTGTAACAAAAA
GTACCCATGTGGGAAGTCACTTGGAGGACACATAAAGTGTCATGTAGTTGATGAAAAATT
TGAAACTGCTAAGTTGAAAAAGAAGGAATCTTGGAATATTAGTAGTGGAAAGAATCAATC
GAGTGGTAGTTATGTTCTTAGAGAGAATCCCAAGAAAACTTGGAGGTTTGAGGATTCTAA
CCTATATTGGTCGGACTCTCCAAAAATAATAACAAACAACACTCGCACTACTTTTGGAGA
ATCTGACACGCATCCGAACAACATAGATTCTAAGTATACCGCAGCTCAAGAAAAAGTGTG
TCAGCAATGTGGAAAGGGCTTTCCATCCATGAAAGCTTTGTGTGGTCATATGGCTTGTCA
TTCAGAAAAAGATAAAGGGGGTTTGAAAGATGATGATGACGACGACGACGATGATAACTC
ATGGACTAGTAGTGATCATAGCCATTCAGATACTGAAGCTGGTGAGCTAATCAGTCAAAG
TTGTAGATCAAAGACTACTAAGAGATACAACAAAATTGTAGTTAAGTCGAATAATTATAA
TTGTTCGTCTTCTGTGTCTGAGATTGATCAAGTTCAAGAACAAGAAGAATTAGCCAAGTG
TTTGATAATGTTGTCAAGGGATTCTAGGTCTTGGAATGGTGTTGATTCACTTGTGGAGAC
TTCTGATAACAATTCTGCTATTTTAGAGACTAAACCGTCGTCTAGTGACATGAGGAATAA
TGCTAGAAAGAACGGTGTTAAACGTGTATACAATCAAGATGAAAAGCCTCGAATGAAGAA
AGAGGGAGACACAATCACGAAGATTGATATGTTGGAAGGTGAAACTCAATCCGAGAACTC
TGATTCAGACTACTACTTAGGCGAAAATGGGAATATCGAATCAGATGGCTCTGTTGAGAG
GTACTTAGGAAATGGTAAAGGAAAATGGAATACCTCTAAAATGAGTTTTGCAGCTTGGTT
AAACGAGAATTTGAGTGACGAGAAAAATGGAATAAACAGAATCAAACAATATATAACAGA
GTCAAGGAAGAATTTGGGTAAGAAATGTGAACGCGATGGCTATGGATTAGCCTCAAATTC
GTATATATGTGAATCGAAAAAGAGAGCCATGGATCCATATAATGATCTAGAGATAAGGAA
TGACTCCAAGAAGATGAAGTTGTGTGTTAAGAGTCCTGAAGGATACAAGAATGATATACA
TAAGACGAGAAAATACGAGTGTTTGAACTGCAAGAAGGTGTTTAGCTCATATCAGGCACT
TGGTGGACATAGACCGTGCCACAAAAAGGTCCACGATTATTCTGAATCAACGTATGAAAC
TGGTGAGAATAGCCTTGGTGCTGATCATAATGATCCTAAATGCACAAAACTTGGCAAGCA
TAGGGACGTTTTTCGCAACAAAAAACAAGTAGTTCCTTCTCAAGATTTGCCTTATGAACC
CGAGATAAAGGTTAAAACGAAGAAATCCAAAGGACACAAATGCCCGTTTTGCTATAGGAT
GTTTAAGTCTGGTCAAGCTTTAGGTGGACACAAAAGGTCACATTTTATTAATGGTAGTGA
TCAGGAGAATCTCAATCAACAATCATCAGCTGTAAAGCGCGAAGTTGTTGACTTACTCGA
TCTTAATCTTCCTGCTCCGGTAGATGAGGAGGACGAAGAACATGCTCGATACATGTCCTG
GTAGATGGTTATAAACAAGATGATATATACTCAGCAGGTGCTTATCCTCATTAAGTTTTC
ATGCTCTTTTTTCTATTGTCAATGTTGCCAGAGGTAGGACAAGCATTCTTTCTAATTAGT
TGAAGCTAAGTTGCTTGGACT