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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g010190.2.1
CDS Infomation

LOW QUALITY:Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151RZV3_CAJCA)
Sequence

ATGAATACTCCATCAAAGAAAACTGGTACTTCTTCTTCAAATTCAAAAGATGAAGCAATA
ATTATATATCAGCAACGGAAAATGCAATTTCACGGCACCAGAAAAGGGGATCTCGAAACC
ATAGATTCATATATCAAAAAATTAAAATCCGCAGCTGATTCTCTAACGGCAATCGGCAAT
CCAATTTCAGATCCAGATTTGGTTTTGCAACTTGTAGCTGGTTTGCCTCATTCTCCATAC
TTGCTCCTCAAAAACACGATTTCGTCTCAGTTACCTCTTCCAAATTTCTCAGAGGCTTGT
TCCATGCTTTACGAATACGAGAAAACGACATCAACTCCTCCTCCTCCACCTCCATCCAGA
GGAGAAAACAGTACTAGTAATACTGGTAAGAGTACTCTGGAGATGATCCATGATATAGCA
AATACTGTGACGAGTGTTGTTCCGATAGCAAGCGAAATTTGTAATGCGATAAGTAGACGC
TGGTCTGTTAGTGGTTCTTCAGGAACACCAACAAGGGCGACTCCAGGTCCAGGAAATACG
AAAAAAGGATCTACCGGAGGAAGAGGAAGGGGAAACAATAACAGAGGCAGAGGCAGAGGC
GGAGGCGGAGGCAGAGGAGGATCTTCTACTCGCAATTCTACTGGGAAATAG

Peptide Sequence

PEP ID

Solyc01g010190.2.1
PEP Infomation

LOW QUALITY:Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151RZV3_CAJCA)
Sequence

MNTPSKKTGTSSSNSKDEAIIIYQQRKMQFHGTRKGDLETIDSYIKKLKSAADSLTAIGN
PISDPDLVLQLVAGLPHSPYLLLKNTISSQLPLPNFSEACSMLYEYEKTTSTPPPPPPSR
GENSTSNTGKSTLEMIHDIANTVTSVVPIASEICNAISRRWSVSGSSGTPTRATPGPGNT
KKGSTGGRGRGNNNRGRGRGGGGGRGGSSTRNSTGK*

Transcript Sequence

Transcript ID

Solyc01g010190.2.1
Transcript Infomation

LOW QUALITY:Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151RZV3_CAJCA)
Sequence

ACGCACCACCCCCTACCCCCTACCCAAAAAAAAATACTCCCCTTATTACACCATCCACAG
ACCAGAATAGGTAGAGAAAGTTCACACTAAAAGTAGTGAGAAAAAGAAAATATGAATACT
CCATCAAAGAAAACTGGTACTTCTTCTTCAAATTCAAAAGATGAAGCAATAATTATATAT
CAGCAACGGAAAATGCAATTTCACGGCACCAGAAAAGGGGATCTCGAAACCATAGATTCA
TATATCAAAAAATTAAAATCCGCAGCTGATTCTCTAACGGCAATCGGCAATCCAATTTCA
GATCCAGATTTGGTTTTGCAACTTGTAGCTGGTTTGCCTCATTCTCCATACTTGCTCCTC
AAAAACACGATTTCGTCTCAGTTACCTCTTCCAAATTTCTCAGAGGCTTGTTCCATGCTT
TACGAATACGAGAAAACGACATCAACTCCTCCTCCTCCACCTCCATCCAGAGGAGAAAAC
AGTACTAGTAATACTGGTAAGAGTACTCTGGAGATGATCCATGATATAGCAAATACTGTG
ACGAGTGTTGTTCCGATAGCAAGCGAAATTTGTAATGCGATAAGTAGACGCTGGTCTGTT
AGTGGTTCTTCAGGAACACCAACAAGGGCGACTCCAGGTCCAGGAAATACGAAAAAAGGA
TCTACCGGAGGAAGAGGAAGGGGAAACAATAACAGAGGCAGAGGCAGAGGCGGAGGCGGA
GGCAGAGGAGGATCTTCTACTCGCAATTCTACTGGGAAATAGTATATTTGCTTGGAGTTG
TTTGGAAAAATTCTATCTATACAAACTTGTCTTCTTTTTTTTTCCTATTTAGTTGTACAC
TTTAGAAATGACACGTATTAAGATAGCAATAATCAGTATCGTAAAATTATAATATTATCC
TTGTTAATTATGATTTCAA