Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g010080.3.1
CDS Infomation

Potassium channel (AHRD V3.3 *** B6ECZ4_TOBAC)
Sequence

ATGTCGGAGACGACTCGATCTCCGATGCCGTTATCGGAGACGAGGTCTCCGATGCCGCTG
TTATTCCGACGACATTCGAGTGGCGAAATCAGAAATTTAGCTTCACTTTCAAGTAGCTTA
TTGCCAGCTTTTGGAACAGTGATGGGTGAAAGCTCAGTTAGGCTTAAGAGATTTCTTATT
GCTCCGTATGATCGTAGATACAGATTGTGGCAAGCATTTCTTGTTGTACTAGTGGTGTAC
TCAGCATGGTCATCTCCCTTTGAGTTAGCATTCAGCAAGGCATCTACTGGAGCACTCTTG
CCTGTTGATTTAGTGGTTGATGCCTTCTTTGCTATTGACATTATACTCACTTTCTTTGTT
GCATACTTGGACAAATCTACTTACTTACTTGTTGAAGAACACAAGAAAATTGCTTTAAGG
TATGTCACACATCTATGGTTTCCAATGGATGTAGCTTCAACTCTACCATTTCAAGCCATA
TACAGAGTTGTCACTGGCAAAACTAGTAGAGGACAAGTATTTGGCTTCCTTAACTTGTTA
AGATTATGGCGACTCCGCCGTGTTAGTAAATTCTTCTCGAGGTTGGAGAAGGATACTAGA
TTCAGCTACTTTTGGACGAGATATTTTAAACTTATTTGTGTGACACTATTTGCAGTGCAT
TCAGCTGGTTGTTTCTATTACTGGTTGGCAACACGTTATCATAATTCAGAATCAACATGG
ATGGGAGCAAATATACCTGATTTCAAATCAAGAAGTATATGGCTAGGATATACTTATTCA
ATGTATTGGTCTATTGTTACACTTTCAACTGTTGGCTATGGTGATCTTCATGCTGTGAAT
ATTGAAGAAAAGATTTTCACCATTTTTTACATGCTTTTCAACATTGGCCTTACTGCATAC
TTGATTGGCAACATGACTAACCTTATTGTCCATACCGCTGTCCGAACCTTCGTCATGAGG
GATGCTATCAATGAGATTTTGAGGTATGCAAAAAAAAATAGACTTCCAGAAGGGCTAAGA
GAACAAATGTTGGCACATTTAACACTGAAATTCAAGACAGCAGAACTACAACAAGAACAA
GTTTTAGAAGACTTGCCAAAGGCTATTAGATCTAGCATTCTACAACAACTCTTTCGTACC
ACTCTACAAAATTCCCATCTATTCAAAGGAGTCTCCGACGACTTTATCGTCCAATTGGTA
TCAGAAATAAAAGCAGAATATTTTCCACCAAAAGTGGATATTGTCATACAAAATGAGATA
CCAACAGATTTCTACATTATTGTATCTGGGGCTGTGGATGTTGTAACATACAAGAACGGA
ATGGAACAATTTTTATCCAAGTTGGGATCTCAACAAATGTTTGGAGAAATAGGTGTAATA
TTCAATATCCCTCAACCTTTCACAGTGAGAACTAAAAGGCTTTCTCAAGTTGTTCGTATT
AGTCATCATCATTTCAAGCAATTGGTACAACCCCTTCATGAAGATGGAAAAATAATTCAC
ACTAATTTTATTCAGCATTTGAAGGGATTGAAAAATGAGGAGCTAGCTGAGATGCCGCTA
ATATCAGAATTTCTTGATGATTTAATTAGTGAGGAAGCCTCGATGAATGAGGCCGGAGCT
CAAGACCAACAAGAAAACGAGTTATCGGCAACTACTTCTTCGTTATCAAAAACACCTTCT
ACTAGAGTGATAATTCACGGATATCACCCGGATCATAAGCCAAAATCAGGAGGAAAACTT
ATACATCTACCTGATTCAATTGAAAATCTTCATAGTATTGCAGAAAGTAAGTTTGGGAGA
AGAGGAAGTACGATTCTCATGGCGGATGGTTCTCAAGTAGAGGATTTGGCTGCTCTGAGA
GAGGATGATCACTTGTATATTTTTTGA

Peptide Sequence

PEP ID

Solyc01g010080.3.1
PEP Infomation

Potassium channel (AHRD V3.3 *** B6ECZ4_TOBAC)
Sequence

MSETTRSPMPLSETRSPMPLLFRRHSSGEIRNLASLSSSLLPAFGTVMGESSVRLKRFLI
APYDRRYRLWQAFLVVLVVYSAWSSPFELAFSKASTGALLPVDLVVDAFFAIDIILTFFV
AYLDKSTYLLVEEHKKIALRYVTHLWFPMDVASTLPFQAIYRVVTGKTSRGQVFGFLNLL
RLWRLRRVSKFFSRLEKDTRFSYFWTRYFKLICVTLFAVHSAGCFYYWLATRYHNSESTW
MGANIPDFKSRSIWLGYTYSMYWSIVTLSTVGYGDLHAVNIEEKIFTIFYMLFNIGLTAY
LIGNMTNLIVHTAVRTFVMRDAINEILRYAKKNRLPEGLREQMLAHLTLKFKTAELQQEQ
VLEDLPKAIRSSILQQLFRTTLQNSHLFKGVSDDFIVQLVSEIKAEYFPPKVDIVIQNEI
PTDFYIIVSGAVDVVTYKNGMEQFLSKLGSQQMFGEIGVIFNIPQPFTVRTKRLSQVVRI
SHHHFKQLVQPLHEDGKIIHTNFIQHLKGLKNEELAEMPLISEFLDDLISEEASMNEAGA
QDQQENELSATTSSLSKTPSTRVIIHGYHPDHKPKSGGKLIHLPDSIENLHSIAESKFGR
RGSTILMADGSQVEDLAALREDDHLYIF*

Transcript Sequence

Transcript ID

Solyc01g010080.3.1
Transcript Infomation

Potassium channel (AHRD V3.3 *** B6ECZ4_TOBAC)
Sequence

AGTTCATTCGAATTTATAAGCAGACTACTAACTCCGCACCTGAGGTCACACATACATATA
ACAACTAAAATCAAGTCTCTTGCATATCCTCAACAAACTTAACCTCTCAAAATCCCTTCT
TCTCTCTATCTTCTTAGCTAAAAAAAATGTCGGAGACGACTCGATCTCCGATGCCGTTAT
CGGAGACGAGGTCTCCGATGCCGCTGTTATTCCGACGACATTCGAGTGGCGAAATCAGAA
ATTTAGCTTCACTTTCAAGTAGCTTATTGCCAGCTTTTGGAACAGTGATGGGTGAAAGCT
CAGTTAGGCTTAAGAGATTTCTTATTGCTCCGTATGATCGTAGATACAGATTGTGGCAAG
CATTTCTTGTTGTACTAGTGGTGTACTCAGCATGGTCATCTCCCTTTGAGTTAGCATTCA
GCAAGGCATCTACTGGAGCACTCTTGCCTGTTGATTTAGTGGTTGATGCCTTCTTTGCTA
TTGACATTATACTCACTTTCTTTGTTGCATACTTGGACAAATCTACTTACTTACTTGTTG
AAGAACACAAGAAAATTGCTTTAAGGTATGTCACACATCTATGGTTTCCAATGGATGTAG
CTTCAACTCTACCATTTCAAGCCATATACAGAGTTGTCACTGGCAAAACTAGTAGAGGAC
AAGTATTTGGCTTCCTTAACTTGTTAAGATTATGGCGACTCCGCCGTGTTAGTAAATTCT
TCTCGAGGTTGGAGAAGGATACTAGATTCAGCTACTTTTGGACGAGATATTTTAAACTTA
TTTGTGTGACACTATTTGCAGTGCATTCAGCTGGTTGTTTCTATTACTGGTTGGCAACAC
GTTATCATAATTCAGAATCAACATGGATGGGAGCAAATATACCTGATTTCAAATCAAGAA
GTATATGGCTAGGATATACTTATTCAATGTATTGGTCTATTGTTACACTTTCAACTGTTG
GCTATGGTGATCTTCATGCTGTGAATATTGAAGAAAAGATTTTCACCATTTTTTACATGC
TTTTCAACATTGGCCTTACTGCATACTTGATTGGCAACATGACTAACCTTATTGTCCATA
CCGCTGTCCGAACCTTCGTCATGAGGGATGCTATCAATGAGATTTTGAGGTATGCAAAAA
AAAATAGACTTCCAGAAGGGCTAAGAGAACAAATGTTGGCACATTTAACACTGAAATTCA
AGACAGCAGAACTACAACAAGAACAAGTTTTAGAAGACTTGCCAAAGGCTATTAGATCTA
GCATTCTACAACAACTCTTTCGTACCACTCTACAAAATTCCCATCTATTCAAAGGAGTCT
CCGACGACTTTATCGTCCAATTGGTATCAGAAATAAAAGCAGAATATTTTCCACCAAAAG
TGGATATTGTCATACAAAATGAGATACCAACAGATTTCTACATTATTGTATCTGGGGCTG
TGGATGTTGTAACATACAAGAACGGAATGGAACAATTTTTATCCAAGTTGGGATCTCAAC
AAATGTTTGGAGAAATAGGTGTAATATTCAATATCCCTCAACCTTTCACAGTGAGAACTA
AAAGGCTTTCTCAAGTTGTTCGTATTAGTCATCATCATTTCAAGCAATTGGTACAACCCC
TTCATGAAGATGGAAAAATAATTCACACTAATTTTATTCAGCATTTGAAGGGATTGAAAA
ATGAGGAGCTAGCTGAGATGCCGCTAATATCAGAATTTCTTGATGATTTAATTAGTGAGG
AAGCCTCGATGAATGAGGCCGGAGCTCAAGACCAACAAGAAAACGAGTTATCGGCAACTA
CTTCTTCGTTATCAAAAACACCTTCTACTAGAGTGATAATTCACGGATATCACCCGGATC
ATAAGCCAAAATCAGGAGGAAAACTTATACATCTACCTGATTCAATTGAAAATCTTCATA
GTATTGCAGAAAGTAAGTTTGGGAGAAGAGGAAGTACGATTCTCATGGCGGATGGTTCTC
AAGTAGAGGATTTGGCTGCTCTGAGAGAGGATGATCACTTGTATATTTTTTGAGGAAAAA
AAAACAAATGTACTGAAAATATTTTGTGTGTTGATATACTCATATTGAATCTGACAGTAA
ATATATGGTAATGAGATTGAATATATATAATAGAAT