Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g009600.3.1
CDS Infomation

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT4G00750.1)
Sequence

ATGGCTGGTCCTAAAACGCCTCCCTACTATAGCCCAACGTACAAGAAGAATGGAGCAAAC
TACCCGTCTTCACCTCATTCGATACGTATCAATGTATATACATTGGCTATCGCGTTTACT
ATCCTCTGTTCTATGTCGTATTTGATAGGCAGAGGATCCATTTCTACCTCCCCTGTTTCT
AACGCTTCTTCTTCCGTCCTCTGCATTCCGTTAAAAATCACTTCTTCAACCTCTGGAGTA
TACAAAAATTCTTCCTCTGGTGACGAGGAAGGGGAAGGCGCGGTATCTGATGATGTGAAA
CTTTATCCACCATGTGACTTCAAATATAGTGAGTATACGCCTTGTGAAGATCCTCAACGA
TCGTTGAAATTCAAGAGGGATCGATTGATATACAGGGAGAGGCATTGTCCTGACAAGACT
CAGTTGTTAAAGTGTCGTGTACCAGCGCCTTATGGTTATAAGAAGCCGTTTAAATGGCCT
AAGAGTAGGGATTTGGCGTGGTACGCCAATGTACCTCACAAGGAGTTGACGGTGGAGAAG
GCCGTTCAAAATTGGATTCGTAAAGAAGGAGATAAGTTTAGGTTCCCTGGTGGAGGGACT
ATGTTTCCTAATGGTGCCGATGCATACGTTGATGACATTGATAAGTTGATAAATCTTAAA
GATGGTTCCATTAGGACAGCCATTGACACGGGTTGTGGGGTGGCGAGTTGGGGAGCTTAT
CTTCTATCGCGAGACATTCTAGCAATGTCATTTGCACCTAGAGATACACATGAAGCACAA
GTTCAATTTGCTCTTGAGCGAGGCGTTCCTGCATTGATTGGCGTGCTCGCGTCTAAGAGG
CTTCCCTATCCATCTAGAGCTTTCGATATGGCTCATTGCTCTCGTTGCCTTATCCCTTGG
GACCTATATGATGGCGCGTACTTAATGGAAGTCGATAGAGTTTTGAGGCCCGGTGGATAT
TGGATACTCTCCGGTCCACCAATTCGTTGGAGGAAATATTTCAAAGGATGGGAAAGAACT
AAAGATGATCTTAACGGTGAGCAAACCCGAATTGAAGAGGTAGCTAAGAAACTCTGCTGG
AAAAAATTCGTCGAAAAGGATGACATAGCAATATGGCAAAAGCCCTACAATCATTTCCAA
TGCAAAGAACAAAAGAAGCAACTAATGTGTTCTGTCCAAGATTATGATAAAGCATGGTAT
ACGGAGCTTGAAACGTGTATAACTCCCTTGCCCGAAGTGACAAGTGAAGAAGATGTGGCT
GGTGGACAATTGGAGAAATGGCCTAAAAGATTAAACGCGATACCACCAAGGATAAGCAGT
GGAAGTGTGAAAGGGGTTACGGCTGGATCATTCGAAAAAGACTCACAGCTATGGCGAAAA
AGAGTTAGTTATTACAAGAGCATAGACAACAAACTTAATCAACCAGGGAGATTTAGAAAT
CTATTAGATATGAATGCTAACCTTGGTGGTTTTGCTGCTAGTTGGGTTGATGATCCTGTT
TGGGTAATGAATATTGTGCCTGCTGAAGCAGAGGTCAATACACTTGGTGTCATATATGAA
AGAGGGTTGATTGGAACATATCAAAGCTGGTGTGAAGCTATGTCAACTTACCCAAGAACA
TATGATCTTCTTCATGCTGATTCAATATTTACTATGTACAAAGAGAGATGTGACATGGAT
GACATATTACTAGAAATGGATAGAATATTAAGGCCAGAAGGAAGTATAATTATACGTGAG
GATGTAGATATATTAGTTGAAGTAAAGAGGATTGTAGATGGGCTAAATTGGGAGAGTTTG
ATTGTGGATCATGAAGATGGCCCAATGGAAAGAGAAAAGCTTCTATTTGGTGTGAAGACA
TATTGGACAGCACCAGCAAACACCACCACAAGCCCAAGGATCTAA

Peptide Sequence

PEP ID

Solyc01g009600.3.1
PEP Infomation

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT4G00750.1)
Sequence

MAGPKTPPYYSPTYKKNGANYPSSPHSIRINVYTLAIAFTILCSMSYLIGRGSISTSPVS
NASSSVLCIPLKITSSTSGVYKNSSSGDEEGEGAVSDDVKLYPPCDFKYSEYTPCEDPQR
SLKFKRDRLIYRERHCPDKTQLLKCRVPAPYGYKKPFKWPKSRDLAWYANVPHKELTVEK
AVQNWIRKEGDKFRFPGGGTMFPNGADAYVDDIDKLINLKDGSIRTAIDTGCGVASWGAY
LLSRDILAMSFAPRDTHEAQVQFALERGVPALIGVLASKRLPYPSRAFDMAHCSRCLIPW
DLYDGAYLMEVDRVLRPGGYWILSGPPIRWRKYFKGWERTKDDLNGEQTRIEEVAKKLCW
KKFVEKDDIAIWQKPYNHFQCKEQKKQLMCSVQDYDKAWYTELETCITPLPEVTSEEDVA
GGQLEKWPKRLNAIPPRISSGSVKGVTAGSFEKDSQLWRKRVSYYKSIDNKLNQPGRFRN
LLDMNANLGGFAASWVDDPVWVMNIVPAEAEVNTLGVIYERGLIGTYQSWCEAMSTYPRT
YDLLHADSIFTMYKERCDMDDILLEMDRILRPEGSIIIREDVDILVEVKRIVDGLNWESL
IVDHEDGPMEREKLLFGVKTYWTAPANTTTSPRI*

Transcript Sequence

Transcript ID

Solyc01g009600.3.1
Transcript Infomation

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT4G00750.1)
Sequence

TATAACTCGTACTTCATTCAGTAACTTAAAGAGTTTAATCTTTCAATTTTCTCTCATGGC
TGGTCCTAAAACGCCTCCCTACTATAGCCCAACGTACAAGAAGAATGGAGCAAACTACCC
GTCTTCACCTCATTCGATACGTATCAATGTATATACATTGGCTATCGCGTTTACTATCCT
CTGTTCTATGTCGTATTTGATAGGCAGAGGATCCATTTCTACCTCCCCTGTTTCTAACGC
TTCTTCTTCCGTCCTCTGCATTCCGTTAAAAATCACTTCTTCAACCTCTGGAGTATACAA
AAATTCTTCCTCTGGTGACGAGGAAGGGGAAGGCGCGGTATCTGATGATGTGAAACTTTA
TCCACCATGTGACTTCAAATATAGTGAGTATACGCCTTGTGAAGATCCTCAACGATCGTT
GAAATTCAAGAGGGATCGATTGATATACAGGGAGAGGCATTGTCCTGACAAGACTCAGTT
GTTAAAGTGTCGTGTACCAGCGCCTTATGGTTATAAGAAGCCGTTTAAATGGCCTAAGAG
TAGGGATTTGGCGTGGTACGCCAATGTACCTCACAAGGAGTTGACGGTGGAGAAGGCCGT
TCAAAATTGGATTCGTAAAGAAGGAGATAAGTTTAGGTTCCCTGGTGGAGGGACTATGTT
TCCTAATGGTGCCGATGCATACGTTGATGACATTGATAAGTTGATAAATCTTAAAGATGG
TTCCATTAGGACAGCCATTGACACGGGTTGTGGGGTGGCGAGTTGGGGAGCTTATCTTCT
ATCGCGAGACATTCTAGCAATGTCATTTGCACCTAGAGATACACATGAAGCACAAGTTCA
ATTTGCTCTTGAGCGAGGCGTTCCTGCATTGATTGGCGTGCTCGCGTCTAAGAGGCTTCC
CTATCCATCTAGAGCTTTCGATATGGCTCATTGCTCTCGTTGCCTTATCCCTTGGGACCT
ATATGATGGCGCGTACTTAATGGAAGTCGATAGAGTTTTGAGGCCCGGTGGATATTGGAT
ACTCTCCGGTCCACCAATTCGTTGGAGGAAATATTTCAAAGGATGGGAAAGAACTAAAGA
TGATCTTAACGGTGAGCAAACCCGAATTGAAGAGGTAGCTAAGAAACTCTGCTGGAAAAA
ATTCGTCGAAAAGGATGACATAGCAATATGGCAAAAGCCCTACAATCATTTCCAATGCAA
AGAACAAAAGAAGCAACTAATGTGTTCTGTCCAAGATTATGATAAAGCATGGTATACGGA
GCTTGAAACGTGTATAACTCCCTTGCCCGAAGTGACAAGTGAAGAAGATGTGGCTGGTGG
ACAATTGGAGAAATGGCCTAAAAGATTAAACGCGATACCACCAAGGATAAGCAGTGGAAG
TGTGAAAGGGGTTACGGCTGGATCATTCGAAAAAGACTCACAGCTATGGCGAAAAAGAGT
TAGTTATTACAAGAGCATAGACAACAAACTTAATCAACCAGGGAGATTTAGAAATCTATT
AGATATGAATGCTAACCTTGGTGGTTTTGCTGCTAGTTGGGTTGATGATCCTGTTTGGGT
AATGAATATTGTGCCTGCTGAAGCAGAGGTCAATACACTTGGTGTCATATATGAAAGAGG
GTTGATTGGAACATATCAAAGCTGGTGTGAAGCTATGTCAACTTACCCAAGAACATATGA
TCTTCTTCATGCTGATTCAATATTTACTATGTACAAAGAGAGATGTGACATGGATGACAT
ATTACTAGAAATGGATAGAATATTAAGGCCAGAAGGAAGTATAATTATACGTGAGGATGT
AGATATATTAGTTGAAGTAAAGAGGATTGTAGATGGGCTAAATTGGGAGAGTTTGATTGT
GGATCATGAAGATGGCCCAATGGAAAGAGAAAAGCTTCTATTTGGTGTGAAGACATATTG
GACAGCACCAGCAAACACCACCACAAGCCCAAGGATCTAATTTTGTAACGACGTGAACAA
CAACAACGTATTCAGTATAATTTCACGATTGAGGTTCGAGAAGAATCTAAGTTTATAGTA
CGTCAATAACAATAACATATTCAGTATAATTTCACGACTGAGGTCTGGATCTAGTTTTGT
GAAATTAACAATTTTCTATCTTCTTTTTTTTGTTTTTGGAGTAAAGTAATTGAAGGAATT
TTGATTTAGGCATTTTACTCTTGTGACTAAATTTTGTATAGTAGTTTGTCAAAACTTTTG
TGAACAAATTCTATTTGTCTTGATATGACTAATGGATTTTTGTTTTATGTCTTGAAAGTG
CCTTTTGAATTCTTTATCATATTTTTTCTTTTTTTATACTGTTTTTTTTCTTAT