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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g009180.3.1
CDS Infomation

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (AHRD V3.3 *** METE_CATRO)
Sequence

ATGTTAACTGTTGCTAAGAAATTGAGTTCAATATATATGAGACTAGTTTTGCCTACACCT
TCTTCATCGACTTTTTTATCATTTGGTTCATCAGTTTCTGTTTTCTCACCGCCTCGTGGC
ACCCAATTCTTGCGTTTAAATTTTCGATTCAGAACGATGGCGTCTCATGTTGTTGGATAT
CCTCGTATGGGGCCCAAGAGAGAGCTTAAGTTTGCGTTGGAATCATTTTGGGATGGGAAG
AGCAATTCTGAGGATTTGGAGAAAGTGGCAGCTGATCTTAGGTTATCTATTTGGAAGCAG
ATGGCTGATGCTGGCATTAAATATATTCCAAGCAACACCTTCTCGTATTATGACCAAGTT
TTGGACACAACTGCTATGCTAGGTGCAGTTCCACCAAGATACGGTTGGAATGGTGGTGAG
ATTGGTTTTGATGTCTACTTCCCAATGGCTAGGGGAAACGCCTCTGTACCTGCCATGGAA
ATGACAAAATGGTTTGACACCAACTACCACTATATTGTTCCTGAATTAGGTCCAGATGTT
AAGTTTTCCTATGCGTCTCACAAGGCAGTTAGTGAATATAAGGAAGCTAAATCTCTCGGC
ATTGACACAGTCCCTGTCCTCGTAGGTCCAGTTTCCTTCCTCTTGTTATCAAAAGCAGCA
AAAGGTGTTGAAAAGTCGTTTCCTCTTCTATCACTGATTGAAAAGATTCTTCCAGTTTAC
AAGGAAGTCATTGCTGAACTGAAGGCAGCTGGTGCTAGTTGGATTCAGTTTGATGAGCCT
ACTCTTGTTAAGGATCTTGATTCTCATCAATTGCAAGCATTTTCTCATGCCTACTCAGAA
TTAGAGTCACCGCTTTCCGGATTAAATGTCCTCATTGAGACATATTTTGCTGATGTTCCT
GCTGAAGCTTTCAAAACAGTGACTTCTTTAAAATGTGTTACTGCACTGGGGTTTGATCTA
GTTCGTGGATCAAAGAATCTTGATTTGATCAAGAGTGGTTTTCCTTCAGAAAAGTATCTA
TTTGCTGGAGTAGTTGATGGGAGGAATATTTGGGCTAATGATCTTGCTGCTTCTCTCAGT
ACCTTGCAAGCTCTTGAGAACGTGGCACCGTTCGTCTGCATTCTTGACACTATTGGGCAT
TTGTTTTCTTCAGACAAGCTTGTGGTCTCCACCTCTTGCTCGCTTCTCCACACTGCAGTT
GATTTAGTGAATGAAACTAAGTTGGATGAAGAAATTAAGTCATGGCTTGCATTTGCTGCA
CAAAAATTGGTTGAAGTTAACGCGTTGGCAAAGGCGTTGGCTGGACAAAAAGACGAGGCA
TTCTTCTCTGCTAATGCTGCAGCTCGTACGTCCAGAAAATCCTCTCCCAGAGTGACCAAC
GGGGCTGTGCAGAAGGCTGCTGCTGCGTTGAAGGGCTCTGATCATCGCAGAGCGACAACT
GTAAGTGCGAGGTTGGAAGCTCAACAGAAGAAGCTGAGTCTTCCATCTCTTCCAACCACT
ACCATCGGTTCTTTCCCTCAGACATTGGAGCTTAGAAAAGTTCGACGAGAGTACAAGGCT
AACAAGATCTCGGAGGAAGATTATGTCAAATATATTACGGAGGAAATCAGCAAAGTAGTC
AAACTCCAGGAGGATCTAGACATTGATGTTCTTGTGCACGGAGAGCCAGAGAGAAACGAT
ATGGTCGAGTATTTTGGGGAGCAATTATCTGGTTTTGCTTTTACAGCCAATGGATGGGTT
CAATCTTATGGATCTCGCTGTGTTAAGCCACCAATAATCTACGGTGATGTCAGTCGCCCA
AAACCAATGACTGTCTTCTGGTCTTCACGAGCACAGAGCATGAGCAAGCGTCCAATGAAG
GGAATGCTTACAGGACCTGTTACCATTTTAAATTGGTCTTTTGTTAGAGATGACCAGCCA
AGATTTGAGACTTGCTACCAAATAGCTTTGGCTATTAAGGATGAGGTTGAAGATCTCGAG
AAGGCTGGCATTAATGTCATTCAGATTGATGAAGCTGCTTTAAGAGAGGGTTTACCTCTT
AGAAAATCCGAGGAAGCTTTCTACTTGAACTGGGCTGTACATTCATTCAGGATTACCAAC
TGTGGTGTTCAAGACACTACCCAGATTCACACTCACATGTGCTATTCAAACTTCAACGAC
ATCATCCATTCAATTATCGACATGGATGCTGACGTTATCACCATCGAGAACTCCAGGTCT
GACGAGAAACTTCTTTCTGTGTTCCGCGAGGGAGTGAAGTATGGTGCTGGCATTGGCCCC
GGAGTATACGACATCCATTCACAAAGGATTCCATCAACAGAAGAAATAGCTGACAGAATC
AGCAAGATGCTTGCAGTCCTTGATACCAACATCCTCTGGGTTAACCCCGACTGTGGCCTC
AAAACGCGCAAGTATACTGAAGTTAAGCCTGCACTCAGCAACATGGTAGCAGCTGCTAAG
CTTCTCCGCAACCAGTTGGCCAGCACGAAGTGA

Peptide Sequence

PEP ID

Solyc01g009180.3.1
PEP Infomation

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (AHRD V3.3 *** METE_CATRO)
Sequence

MLTVAKKLSSIYMRLVLPTPSSSTFLSFGSSVSVFSPPRGTQFLRLNFRFRTMASHVVGY
PRMGPKRELKFALESFWDGKSNSEDLEKVAADLRLSIWKQMADAGIKYIPSNTFSYYDQV
LDTTAMLGAVPPRYGWNGGEIGFDVYFPMARGNASVPAMEMTKWFDTNYHYIVPELGPDV
KFSYASHKAVSEYKEAKSLGIDTVPVLVGPVSFLLLSKAAKGVEKSFPLLSLIEKILPVY
KEVIAELKAAGASWIQFDEPTLVKDLDSHQLQAFSHAYSELESPLSGLNVLIETYFADVP
AEAFKTVTSLKCVTALGFDLVRGSKNLDLIKSGFPSEKYLFAGVVDGRNIWANDLAASLS
TLQALENVAPFVCILDTIGHLFSSDKLVVSTSCSLLHTAVDLVNETKLDEEIKSWLAFAA
QKLVEVNALAKALAGQKDEAFFSANAAARTSRKSSPRVTNGAVQKAAAALKGSDHRRATT
VSARLEAQQKKLSLPSLPTTTIGSFPQTLELRKVRREYKANKISEEDYVKYITEEISKVV
KLQEDLDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRP
KPMTVFWSSRAQSMSKRPMKGMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLE
KAGINVIQIDEAALREGLPLRKSEEAFYLNWAVHSFRITNCGVQDTTQIHTHMCYSNFND
IIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSQRIPSTEEIADRI
SKMLAVLDTNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRNQLASTK*

Transcript Sequence

Transcript ID

Solyc01g009180.3.1
Transcript Infomation

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (AHRD V3.3 *** METE_CATRO)
Sequence

ATATATATGAAGCAAAATCTTGAAAAGTGGACATGTTAACTGTTGCTAAGAAATTGAGTT
CAATATATATGAGACTAGTTTTGCCTACACCTTCTTCATCGACTTTTTTATCATTTGGTT
CATCAGTTTCTGTTTTCTCACCGCCTCGTGGCACCCAATTCTTGCGTTTAAATTTTCGAT
TCAGAACGATGGCGTCTCATGTTGTTGGATATCCTCGTATGGGGCCCAAGAGAGAGCTTA
AGTTTGCGTTGGAATCATTTTGGGATGGGAAGAGCAATTCTGAGGATTTGGAGAAAGTGG
CAGCTGATCTTAGGTTATCTATTTGGAAGCAGATGGCTGATGCTGGCATTAAATATATTC
CAAGCAACACCTTCTCGTATTATGACCAAGTTTTGGACACAACTGCTATGCTAGGTGCAG
TTCCACCAAGATACGGTTGGAATGGTGGTGAGATTGGTTTTGATGTCTACTTCCCAATGG
CTAGGGGAAACGCCTCTGTACCTGCCATGGAAATGACAAAATGGTTTGACACCAACTACC
ACTATATTGTTCCTGAATTAGGTCCAGATGTTAAGTTTTCCTATGCGTCTCACAAGGCAG
TTAGTGAATATAAGGAAGCTAAATCTCTCGGCATTGACACAGTCCCTGTCCTCGTAGGTC
CAGTTTCCTTCCTCTTGTTATCAAAAGCAGCAAAAGGTGTTGAAAAGTCGTTTCCTCTTC
TATCACTGATTGAAAAGATTCTTCCAGTTTACAAGGAAGTCATTGCTGAACTGAAGGCAG
CTGGTGCTAGTTGGATTCAGTTTGATGAGCCTACTCTTGTTAAGGATCTTGATTCTCATC
AATTGCAAGCATTTTCTCATGCCTACTCAGAATTAGAGTCACCGCTTTCCGGATTAAATG
TCCTCATTGAGACATATTTTGCTGATGTTCCTGCTGAAGCTTTCAAAACAGTGACTTCTT
TAAAATGTGTTACTGCACTGGGGTTTGATCTAGTTCGTGGATCAAAGAATCTTGATTTGA
TCAAGAGTGGTTTTCCTTCAGAAAAGTATCTATTTGCTGGAGTAGTTGATGGGAGGAATA
TTTGGGCTAATGATCTTGCTGCTTCTCTCAGTACCTTGCAAGCTCTTGAGAACGTGGCAC
CGTTCGTCTGCATTCTTGACACTATTGGGCATTTGTTTTCTTCAGACAAGCTTGTGGTCT
CCACCTCTTGCTCGCTTCTCCACACTGCAGTTGATTTAGTGAATGAAACTAAGTTGGATG
AAGAAATTAAGTCATGGCTTGCATTTGCTGCACAAAAATTGGTTGAAGTTAACGCGTTGG
CAAAGGCGTTGGCTGGACAAAAAGACGAGGCATTCTTCTCTGCTAATGCTGCAGCTCGTA
CGTCCAGAAAATCCTCTCCCAGAGTGACCAACGGGGCTGTGCAGAAGGCTGCTGCTGCGT
TGAAGGGCTCTGATCATCGCAGAGCGACAACTGTAAGTGCGAGGTTGGAAGCTCAACAGA
AGAAGCTGAGTCTTCCATCTCTTCCAACCACTACCATCGGTTCTTTCCCTCAGACATTGG
AGCTTAGAAAAGTTCGACGAGAGTACAAGGCTAACAAGATCTCGGAGGAAGATTATGTCA
AATATATTACGGAGGAAATCAGCAAAGTAGTCAAACTCCAGGAGGATCTAGACATTGATG
TTCTTGTGCACGGAGAGCCAGAGAGAAACGATATGGTCGAGTATTTTGGGGAGCAATTAT
CTGGTTTTGCTTTTACAGCCAATGGATGGGTTCAATCTTATGGATCTCGCTGTGTTAAGC
CACCAATAATCTACGGTGATGTCAGTCGCCCAAAACCAATGACTGTCTTCTGGTCTTCAC
GAGCACAGAGCATGAGCAAGCGTCCAATGAAGGGAATGCTTACAGGACCTGTTACCATTT
TAAATTGGTCTTTTGTTAGAGATGACCAGCCAAGATTTGAGACTTGCTACCAAATAGCTT
TGGCTATTAAGGATGAGGTTGAAGATCTCGAGAAGGCTGGCATTAATGTCATTCAGATTG
ATGAAGCTGCTTTAAGAGAGGGTTTACCTCTTAGAAAATCCGAGGAAGCTTTCTACTTGA
ACTGGGCTGTACATTCATTCAGGATTACCAACTGTGGTGTTCAAGACACTACCCAGATTC
ACACTCACATGTGCTATTCAAACTTCAACGACATCATCCATTCAATTATCGACATGGATG
CTGACGTTATCACCATCGAGAACTCCAGGTCTGACGAGAAACTTCTTTCTGTGTTCCGCG
AGGGAGTGAAGTATGGTGCTGGCATTGGCCCCGGAGTATACGACATCCATTCACAAAGGA
TTCCATCAACAGAAGAAATAGCTGACAGAATCAGCAAGATGCTTGCAGTCCTTGATACCA
ACATCCTCTGGGTTAACCCCGACTGTGGCCTCAAAACGCGCAAGTATACTGAAGTTAAGC
CTGCACTCAGCAACATGGTAGCAGCTGCTAAGCTTCTCCGCAACCAGTTGGCCAGCACGA
AGTGAGCTTGACTTACCATAGTTGATACAACGTGACGTTTGAAATTGCCATGGCTGTTTG
TTGCAGAGAAATAATATGTAGGTTTCTGAGTTACTAGCCAAATTATCTGAGGTTTGCTAT
TTAGCTCCTTTTTTCATCATTGCTTCTTGTATTTACCCTAATAGAAGTAAGAAAA