Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g008960.3.1
CDS Infomation	Argonaute 4a
Sequence	ATGGCTGAAGAAGAAACAAATGGAGCAGCAGCAGAGGGTCTGCCACCTCCTCCCCCTGTT CCACCAGATTTCACTCCTGCTAAAACTGAAATTGAGCCTGTGAAGAAAAAGATCTTGCGC GTTCCCATGGCCAGGCGTGGTGTTGGAAATAAGGGACAAAAGATTCAAATACTTACTAAT CACTTTAAAGTGAATGTAAACAATGTGGATGGACACTTCTTCCACTACAGTGTTGCCTTA TTCTATGAAGATGGTCGACCAGTTGATGGGAAGGGAGTTGGAAGGAAGGTGTTAGACACA GTGCACGAAACTTATGATACAGAATTAGCTGGAAAGGACTTTGCCTATGATGGTGAAAAA AGCTTGTTTACCATTGGAGCACTCCCTAGGAATAAAATGGAGTTCACTGTTGTCCTTGAT GACGTGATATCAAATAGGAACAATGGTAACAGCAGCCCCGGTGGGCATGGTAGTCCTAAT GAAGCTGACAGGAAGAGGTTACGTCGTCCTTACCAGTCAAAAACTTTCAAGGTGGAGATC AGTTTTGCTGCCAAAATCCCGATGCAGGCGATTGCAAATGCTCTGCGTGGTCAAGAGTCA GAGAACTCTCAAGAAGCCTTGCGAGTCTTGGATATTATTTTGAGGCAGCATGCTGCAAAG CAGGGTTGCCTGCTTGTTCGACAATCCTTTTTCCACAATGATCCCAAGAACTTTGTTGAT GTCGGCGCTGGTGTGCTTGGTTGTCGAGGATTCCATTCCAGCTTCCGGACTACCCAGAGT GGCTTGTCTTTGAACATTGATGTGTCTACAACAATGATTATCCAGCCTGGGCCTGTCGTG GACTTCTTGATTGCAAATCAAAATGCAAAGGATCCCTTTTCACTGGATTGGGCAAAGGCA AAACGTGTGCTCAAGAATTTGAGGGTGAAGACAACCCCCACTAATCAAGAGTACAAGATT ACTGGACTGAGTGACCGTCCTTGTCGTGAGCAACTATTTACCCTGAAGCAGAAAGGAAAA GATGCAGATGGTGAGGTCCAAACTACTGAAGTTACTGTGTTCGATTACTTTGTCAACCAC CGCAACATAGAGTTGCGTTATTCTGCTGATTTACCCTGCATAAATGTTGGGAAACCAAAG CGTCCCACCTTTTTCCCAATTGAGCTATGTTCCTTGGTGTCTTTGCAAAGATACACAAAA TCCTTGTCCACATTCCAGAGGTCTTCACTAGTTGAGAAATCAAGGCAAAAGCCTCAGGAG AGGATGCAAGTCTTAAGCAATGCTCTCAAAATCAACCAATATGATGCTGAGCCTCTGCTT CGTTCCTGTGGAATATCCATTAGCAATAACTTCACTCAGATTGAAGGACGTGTTCTTCCT CCCCCAAAGCTGAAGACGGGCGGTGATGACTTTGTCCCTCGTAATGGCAGATGGAATTTC AATAATAAGAGACTAGTTGATCCCACTAAGATAGAACGCTGGGCCGTTGTCAATTTTTCT GCACGCTGCAATGTACAAGGGCTAGTCAGTGATCTGATCAAATGTGGAAAACAGAAAGGA ATTATGGTGGAAGACCCATTTGATGTCTTTGAGGAGTCTCCACAAGTCAGGAGGGCTCCA CCACTTGTGAGGGTTGAGAAGATGTTTGAGCAGGTTCAATCCAAGCTACCCGGGGCACCT AAATTCCTGCTTTGTTTGCTTCCTGAGAGGAAAAACTGTGATGTATACGGACCATGGAAG CGAAAGAATCTTGCTGAGTATGGCATTGTTACCCAGTGTATAGCTCCAACAAGAGTCAAT GATCAATATATCACCAATGTGCTCCTGAAGATAAACGCGAAGCTTGGAGGTTTGAACTCT ATGTTAACTGTTGAACATTCTCCTGCAATCCCTATGGTGTCTAAGGTCCCTACCATTATT CTTGGGATGGATGTGTCCCATGGCTCTCCTGGCCAATCTGATGTCCCTTCAATTGCAGCG GTTGTCAGTTCAAGGCAGTGGCCATCAATATCTCGTTACAGAGCTTCAGTTCGTACTCAG TCTCCTAAAGTGGAGATGATAGACAACTTGTTTAAACGTACCTCTGATACTGAAGATGAT GGAATAATGAGGGAGGCGTTGCTAGATTTTTATGTGAGCTCTGGAAAAAGGAAGCCCGAG CATATAATAATATTCAGGGATGGTGTCAGTGAATCTCAGTTTAGTCAAGTTCTGAATGTT GAGCTGGACCAGATTATTGAGGCTTGTAAGTTTCTTGATGAGAAGTGGTCACCCAAGTTT GTGGTGATAGTTGCCCAGAAGAACCATCATACCAAGTTTTTCCAGCCTAATGATCCTAAC AATGTTCCTCCAGGCACAATCATAGACAACAAAGTCTGTCACCCAAGGAATTATGACTTT TACCTGTGTGCTCATGCTGGAATGATTGGTACAACTCGTCCTACTCACTATCACGTCTTG TATGATGAGCTGGGTTTCTCTGCTGATGATCTTCAAGAGCTTGTTCATAATCTCTCTTAT GTGTACCAGAGAAGCACCACTGCAATATCTGTTGTTGCTCCTATCTGTTATGCCCATCTT GCTGCTACTCAAATGGGACAGTGGATGAAGTTTGAAGATGCATCAGAGACTTCCTCAAGT CATAATGGAGTAACCAATGCTGGACCAGTCTCCGTTCCTCAGCTTCCAAAGCTCGAGGAG AAAGTTTCCAGTTCTATGTTCTTTTGCTAA

Peptide Sequence

PEP ID	Solyc01g008960.3.1
PEP Infomation	Argonaute 4a
Sequence	MAEEETNGAAAEGLPPPPPVPPDFTPAKTEIEPVKKKILRVPMARRGVGNKGQKIQILTN HFKVNVNNVDGHFFHYSVALFYEDGRPVDGKGVGRKVLDTVHETYDTELAGKDFAYDGEK SLFTIGALPRNKMEFTVVLDDVISNRNNGNSSPGGHGSPNEADRKRLRRPYQSKTFKVEI SFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFVD VGAGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDWAKA KRVLKNLRVKTTPTNQEYKITGLSDRPCREQLFTLKQKGKDADGEVQTTEVTVFDYFVNH RNIELRYSADLPCINVGKPKRPTFFPIELCSLVSLQRYTKSLSTFQRSSLVEKSRQKPQE RMQVLSNALKINQYDAEPLLRSCGISISNNFTQIEGRVLPPPKLKTGGDDFVPRNGRWNF NNKRLVDPTKIERWAVVNFSARCNVQGLVSDLIKCGKQKGIMVEDPFDVFEESPQVRRAP PLVRVEKMFEQVQSKLPGAPKFLLCLLPERKNCDVYGPWKRKNLAEYGIVTQCIAPTRVN DQYITNVLLKINAKLGGLNSMLTVEHSPAIPMVSKVPTIILGMDVSHGSPGQSDVPSIAA VVSSRQWPSISRYRASVRTQSPKVEMIDNLFKRTSDTEDDGIMREALLDFYVSSGKRKPE HIIIFRDGVSESQFSQVLNVELDQIIEACKFLDEKWSPKFVVIVAQKNHHTKFFQPNDPN NVPPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLYDELGFSADDLQELVHNLSY VYQRSTTAISVVAPICYAHLAATQMGQWMKFEDASETSSSHNGVTNAGPVSVPQLPKLEE KVSSSMFFC*

Transcript Sequence

Transcript ID	Solyc01g008960.3.1
Transcript Infomation	Argonaute 4a
Sequence	GTGGAGGGACACGTGGAGCTCATAGAGAGAGACACAAGAAAGGGCAAAAAAGGTGTAAAA AGGCAGTATTTTAGGCTCACTCGTAACTGTTGAGAGGTACTAAATACTCCCCTTTTTTTT CTCAGTCCACTCTCTCATAAATTTGTCACTCTCCCTCCTTCTCCTCTCTTCCATTTAGGG TTTTGTTCTTGATTTTGGTGCTTCATCTGCCTCTTTTGAGCAGAAGATAGGATCCTGATA TGGCTGAAGAAGAAACAAATGGAGCAGCAGCAGAGGGTCTGCCACCTCCTCCCCCTGTTC CACCAGATTTCACTCCTGCTAAAACTGAAATTGAGCCTGTGAAGAAAAAGATCTTGCGCG TTCCCATGGCCAGGCGTGGTGTTGGAAATAAGGGACAAAAGATTCAAATACTTACTAATC ACTTTAAAGTGAATGTAAACAATGTGGATGGACACTTCTTCCACTACAGTGTTGCCTTAT TCTATGAAGATGGTCGACCAGTTGATGGGAAGGGAGTTGGAAGGAAGGTGTTAGACACAG TGCACGAAACTTATGATACAGAATTAGCTGGAAAGGACTTTGCCTATGATGGTGAAAAAA GCTTGTTTACCATTGGAGCACTCCCTAGGAATAAAATGGAGTTCACTGTTGTCCTTGATG ACGTGATATCAAATAGGAACAATGGTAACAGCAGCCCCGGTGGGCATGGTAGTCCTAATG AAGCTGACAGGAAGAGGTTACGTCGTCCTTACCAGTCAAAAACTTTCAAGGTGGAGATCA GTTTTGCTGCCAAAATCCCGATGCAGGCGATTGCAAATGCTCTGCGTGGTCAAGAGTCAG AGAACTCTCAAGAAGCCTTGCGAGTCTTGGATATTATTTTGAGGCAGCATGCTGCAAAGC AGGGTTGCCTGCTTGTTCGACAATCCTTTTTCCACAATGATCCCAAGAACTTTGTTGATG TCGGCGCTGGTGTGCTTGGTTGTCGAGGATTCCATTCCAGCTTCCGGACTACCCAGAGTG GCTTGTCTTTGAACATTGATGTGTCTACAACAATGATTATCCAGCCTGGGCCTGTCGTGG ACTTCTTGATTGCAAATCAAAATGCAAAGGATCCCTTTTCACTGGATTGGGCAAAGGCAA AACGTGTGCTCAAGAATTTGAGGGTGAAGACAACCCCCACTAATCAAGAGTACAAGATTA CTGGACTGAGTGACCGTCCTTGTCGTGAGCAACTATTTACCCTGAAGCAGAAAGGAAAAG ATGCAGATGGTGAGGTCCAAACTACTGAAGTTACTGTGTTCGATTACTTTGTCAACCACC GCAACATAGAGTTGCGTTATTCTGCTGATTTACCCTGCATAAATGTTGGGAAACCAAAGC GTCCCACCTTTTTCCCAATTGAGCTATGTTCCTTGGTGTCTTTGCAAAGATACACAAAAT CCTTGTCCACATTCCAGAGGTCTTCACTAGTTGAGAAATCAAGGCAAAAGCCTCAGGAGA GGATGCAAGTCTTAAGCAATGCTCTCAAAATCAACCAATATGATGCTGAGCCTCTGCTTC GTTCCTGTGGAATATCCATTAGCAATAACTTCACTCAGATTGAAGGACGTGTTCTTCCTC CCCCAAAGCTGAAGACGGGCGGTGATGACTTTGTCCCTCGTAATGGCAGATGGAATTTCA ATAATAAGAGACTAGTTGATCCCACTAAGATAGAACGCTGGGCCGTTGTCAATTTTTCTG CACGCTGCAATGTACAAGGGCTAGTCAGTGATCTGATCAAATGTGGAAAACAGAAAGGAA TTATGGTGGAAGACCCATTTGATGTCTTTGAGGAGTCTCCACAAGTCAGGAGGGCTCCAC CACTTGTGAGGGTTGAGAAGATGTTTGAGCAGGTTCAATCCAAGCTACCCGGGGCACCTA AATTCCTGCTTTGTTTGCTTCCTGAGAGGAAAAACTGTGATGTATACGGACCATGGAAGC GAAAGAATCTTGCTGAGTATGGCATTGTTACCCAGTGTATAGCTCCAACAAGAGTCAATG ATCAATATATCACCAATGTGCTCCTGAAGATAAACGCGAAGCTTGGAGGTTTGAACTCTA TGTTAACTGTTGAACATTCTCCTGCAATCCCTATGGTGTCTAAGGTCCCTACCATTATTC TTGGGATGGATGTGTCCCATGGCTCTCCTGGCCAATCTGATGTCCCTTCAATTGCAGCGG TTGTCAGTTCAAGGCAGTGGCCATCAATATCTCGTTACAGAGCTTCAGTTCGTACTCAGT CTCCTAAAGTGGAGATGATAGACAACTTGTTTAAACGTACCTCTGATACTGAAGATGATG GAATAATGAGGGAGGCGTTGCTAGATTTTTATGTGAGCTCTGGAAAAAGGAAGCCCGAGC ATATAATAATATTCAGGGATGGTGTCAGTGAATCTCAGTTTAGTCAAGTTCTGAATGTTG AGCTGGACCAGATTATTGAGGCTTGTAAGTTTCTTGATGAGAAGTGGTCACCCAAGTTTG TGGTGATAGTTGCCCAGAAGAACCATCATACCAAGTTTTTCCAGCCTAATGATCCTAACA ATGTTCCTCCAGGCACAATCATAGACAACAAAGTCTGTCACCCAAGGAATTATGACTTTT ACCTGTGTGCTCATGCTGGAATGATTGGTACAACTCGTCCTACTCACTATCACGTCTTGT ATGATGAGCTGGGTTTCTCTGCTGATGATCTTCAAGAGCTTGTTCATAATCTCTCTTATG TGTACCAGAGAAGCACCACTGCAATATCTGTTGTTGCTCCTATCTGTTATGCCCATCTTG CTGCTACTCAAATGGGACAGTGGATGAAGTTTGAAGATGCATCAGAGACTTCCTCAAGTC ATAATGGAGTAACCAATGCTGGACCAGTCTCCGTTCCTCAGCTTCCAAAGCTCGAGGAGA AAGTTTCCAGTTCTATGTTCTTTTGCTAAGGCGCGTAACGCCTTCATGCTTTTCTTTTTT ATGTGTGGTTTGTGAATAGTTTCTGGTTCAAAACTCTTTTGAGAAGACGGTGGTAGTTAA ATATTTTGTCTAGACTTAAATAGGTAAATCACTCTGCTAAAAGATTTCACATCTTTTGGC TCTGTGGTTTGCTATCTCTTTTAACTTATCCTGGATCATGTACTTATGTTTTGGTGGTGT TTTTAAGTTATGGACATGACTAGTAGTTTCTCTATACTTGTGCCTCCTTCCATTGCTTTT GTTTTATCAGTTTTGTGTTTATAAAACTTGTTAGCTAGTATTACCAGCAGGTGTAATGTG AAAGATTTTCACCTTCATCTCTCAATTGATTTGAATGTACTTTTTGAGAGTCT