Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g008910.2.1
CDS Infomation

Scarecrow-like transcription factor 3 family protein (AHRD V3.3 *** B9HP16_POPTR)
Sequence

ATGTTACAAGATGATGGTTCATCATCAGTGACTTCATCATCACCACTTCAAAATTTCCCA
ATGATGTCAATTTCACCTAGCTTTGTTGGTGGTGGTGGTTCACCATATCAGTGGCTTAAA
GATTTGAAATCTGAGGATAGAGGTTTGTATCTGATTCACCTTTTGCTTGCTTGTGCTAAT
CATGTAGCTAATGGTAATCTTGAAAATGCTAACATTGCACTTGATCAAATCTCCTATCTT
GCATCTCCTAATGGAGATACAATGCAACGAATCGCCTCGTATTTCGCTGAATCACTTGCT
GATAGGATATTGAGATCTTGGAATGGGATTTACAAGGCGTTGAATTCGACTAAGTTGAGG
GTTGTATCTGAGGATATACTTGTTAAGAAGATGTTTTTCGAGTACTTTCCGTTCTTGAAA
GTAGCTTCTGTGATCGCTAATCAAGCGATCATAGAAGCTATGGAAGGTGAAAAAATGGTT
CACATTGTTGATCTTAATGCTTCCGAGCCTTTACAGTGGCGTGCGCTCCTTCAGGATTTG
AGCGCACGCCCTGAAGGACCCCCGCATTTGAGGATTACGGGGGTCCATCAACAAAAACAA
GTGTTGGAACAAATAGCACATGTTCTAACAGAGGAAGCTGAAAAGCTTGATGTCCCTTTT
CAGTTTCATCAAGTAGTTAGTAAATTGGAGAATCTTGATATCGAAAAGCTACGAGTTAAA
ACCGGGGAGGCGTTAGCGATTAGCTCGGTTATGCAATTGCATACTCTTCTTGCACATGAT
GATGAACCCCAAAAGAAATCCCCTTTGGGTTTTAAGCATTTGAATGGTGTTCATTTGCAA
AGGGCAATACTAAACCAAAACACTCTAGGGGATTTGCTCGAAAACGAGATGATGACTCAT
AGTGTTTTTAGTCCGGGCAATGAATCAGCATCCTCATCTCCGTTATCATCGAGTGCATCA
ACAAAGATGGAAGGATTCCTCCACGCGTTGTGGGGGTTGTCACCAAAGGTCATGGTGGTT
ACAGAACAAGACTCGAATCATAACGGTACAACCCTTATGGAAAGGCTATCCGAGTCGTTG
TATTACTACGCTGCATTGTTTGATTGTCTCGAGTTCACACTACAGAGAACATCGTTAGAG
AGGTTAAAGGTCGAGAAAATGATGTTTGGCGAGGAGATTAAGAACATTGTAGCGTGTGAG
GGAGGTGAACGTAGGGAGAGACACGAAAAGTTGGATAAATGGTTTCAAAGACTCGATGGA
GCTGGTTTCATGAACGTGCCTTTGAGTTATTACGCGATGTTGCAAGCAAGGAGATTGTTG
CAGAGCTATAGTTGTGAAGGATACAAGATTAAAGACGAGAATGGTAGCGTGGTGATCTGT
TGGCATGATCGCGCGCTCTTCTCAGTCTCAGCGTGGAGATGCAGGAGGTGA

Peptide Sequence

PEP ID

Solyc01g008910.2.1
PEP Infomation

Scarecrow-like transcription factor 3 family protein (AHRD V3.3 *** B9HP16_POPTR)
Sequence

MLQDDGSSSVTSSSPLQNFPMMSISPSFVGGGGSPYQWLKDLKSEDRGLYLIHLLLACAN
HVANGNLENANIALDQISYLASPNGDTMQRIASYFAESLADRILRSWNGIYKALNSTKLR
VVSEDILVKKMFFEYFPFLKVASVIANQAIIEAMEGEKMVHIVDLNASEPLQWRALLQDL
SARPEGPPHLRITGVHQQKQVLEQIAHVLTEEAEKLDVPFQFHQVVSKLENLDIEKLRVK
TGEALAISSVMQLHTLLAHDDEPQKKSPLGFKHLNGVHLQRAILNQNTLGDLLENEMMTH
SVFSPGNESASSSPLSSSASTKMEGFLHALWGLSPKVMVVTEQDSNHNGTTLMERLSESL
YYYAALFDCLEFTLQRTSLERLKVEKMMFGEEIKNIVACEGGERRERHEKLDKWFQRLDG
AGFMNVPLSYYAMLQARRLLQSYSCEGYKIKDENGSVVICWHDRALFSVSAWRCRR*

Transcript Sequence

Transcript ID

Solyc01g008910.2.1
Transcript Infomation

Scarecrow-like transcription factor 3 family protein (AHRD V3.3 *** B9HP16_POPTR)
Sequence

GTGGGTTTTTGATGAACTGAATAACCCAGAAAGGAATTCTTGGTTCTTTGTGTTCTTTTG
TGAGTTCTTGCCCAATTTGTCATTTTTTTGGGAACTTGTGCCAAGATTTGTCTTTTTTGT
TCATGTTTGTTGGCATTTGTGTCATCAAGTTTTGAGTTTTTTGATATCAAGAATTCACCA
CAATGTTACAAGATGATGGTTCATCATCAGTGACTTCATCATCACCACTTCAAAATTTCC
CAATGATGTCAATTTCACCTAGCTTTGTTGGTGGTGGTGGTTCACCATATCAGTGGCTTA
AAGATTTGAAATCTGAGGATAGAGGTTTGTATCTGATTCACCTTTTGCTTGCTTGTGCTA
ATCATGTAGCTAATGGTAATCTTGAAAATGCTAACATTGCACTTGATCAAATCTCCTATC
TTGCATCTCCTAATGGAGATACAATGCAACGAATCGCCTCGTATTTCGCTGAATCACTTG
CTGATAGGATATTGAGATCTTGGAATGGGATTTACAAGGCGTTGAATTCGACTAAGTTGA
GGGTTGTATCTGAGGATATACTTGTTAAGAAGATGTTTTTCGAGTACTTTCCGTTCTTGA
AAGTAGCTTCTGTGATCGCTAATCAAGCGATCATAGAAGCTATGGAAGGTGAAAAAATGG
TTCACATTGTTGATCTTAATGCTTCCGAGCCTTTACAGTGGCGTGCGCTCCTTCAGGATT
TGAGCGCACGCCCTGAAGGACCCCCGCATTTGAGGATTACGGGGGTCCATCAACAAAAAC
AAGTGTTGGAACAAATAGCACATGTTCTAACAGAGGAAGCTGAAAAGCTTGATGTCCCTT
TTCAGTTTCATCAAGTAGTTAGTAAATTGGAGAATCTTGATATCGAAAAGCTACGAGTTA
AAACCGGGGAGGCGTTAGCGATTAGCTCGGTTATGCAATTGCATACTCTTCTTGCACATG
ATGATGAACCCCAAAAGAAATCCCCTTTGGGTTTTAAGCATTTGAATGGTGTTCATTTGC
AAAGGGCAATACTAAACCAAAACACTCTAGGGGATTTGCTCGAAAACGAGATGATGACTC
ATAGTGTTTTTAGTCCGGGCAATGAATCAGCATCCTCATCTCCGTTATCATCGAGTGCAT
CAACAAAGATGGAAGGATTCCTCCACGCGTTGTGGGGGTTGTCACCAAAGGTCATGGTGG
TTACAGAACAAGACTCGAATCATAACGGTACAACCCTTATGGAAAGGCTATCCGAGTCGT
TGTATTACTACGCTGCATTGTTTGATTGTCTCGAGTTCACACTACAGAGAACATCGTTAG
AGAGGTTAAAGGTCGAGAAAATGATGTTTGGCGAGGAGATTAAGAACATTGTAGCGTGTG
AGGGAGGTGAACGTAGGGAGAGACACGAAAAGTTGGATAAATGGTTTCAAAGACTCGATG
GAGCTGGTTTCATGAACGTGCCTTTGAGTTATTACGCGATGTTGCAAGCAAGGAGATTGT
TGCAGAGCTATAGTTGTGAAGGATACAAGATTAAAGACGAGAATGGTAGCGTGGTGATCT
GTTGGCATGATCGCGCGCTCTTCTCAGTCTCAGCGTGGAGATGCAGGAGGTGAAAACTAA
GAAAAGTTCACAAATAACAAAGGGATTTTACTCGAGAAGTTGAACTCCGAAAAACACGTT
TAGTTCATCTTGCTATTTTCCCTTTGTAAAGGTACTTTTTTGTGAAGTGAAAACTCAAAA
CTCTCATGGAGATTGTTATCTTTTCTAATTTGCCCTATCTTGAGGATGTTAGGGTGGTGA
CTTTCTTTCATTTTTGTTATATATAAAGTTCATAATTTTGTGTATGATTTTAGTTCCATA
AGAAGACCTAAAGCATTTTCATTATTAGTAGA