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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g008810.3.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT5G19430.6)
Sequence

ATGTCTACCGTTGTCGAGCTTGAGATTGAGGGGTCAGAACTCTTGAACAACTTTCAGGAT
TTGTCTATTGGAGAACAGACTGAAGTGGAGAGCAATTCTGAGGAAAGGTACCAAGTCGAT
TGTGAGAACAATTATCATGGTGACTGTGCCATATGTTTGAATAAGATAGTGCTCCAAGAA
ACTGCTCTTGTAAAAGGTTGCGAGCATGCTTACTGTGTGACATGCATCCTTCGGTGGGCA
ACCTACAAAAATGAACCAACATGCCCTCAGTGTAAACATCCATTTGAATTTCTCCACATC
CATCGCTCCCTTGATGGAAGTATCCAGGACTACATGTTTGAGGAGAGTGTTTGCCTTCTA
CTGAGAGCATCATGGTTTGAACCCTTTGTGGAGGAAATCGATGATTACATGGATTATGAG
GATGATGAAGAGCTAGAAGACTTCCATGTTACTAGTTCACCAAGTCTCCGCATAAGCAAC
AGGAGATGGGGCAATAATGGTTACGTCAGGGCAGGAAGGCAAGAAGCAAGTCCTGCTCAT
CCACCAAGCTCCCATGACTCGAGCGCCGGATCATCACGCCAGACTACGAAGAATGAGACT
GCTGTTTCTAAAGTAACTGTTGGTCGGCGTGCAAAGAGGACACTCAAGCGTGAAGCTGCT
GATAAGGCAGCTGCAAAAAAGCACCAGTCGCATTTACTGAGGCTGGGTCGTACATGA

Peptide Sequence

PEP ID

Solyc01g008810.3.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT5G19430.6)
Sequence

MSTVVELEIEGSELLNNFQDLSIGEQTEVESNSEERYQVDCENNYHGDCAICLNKIVLQE
TALVKGCEHAYCVTCILRWATYKNEPTCPQCKHPFEFLHIHRSLDGSIQDYMFEESVCLL
LRASWFEPFVEEIDDYMDYEDDEELEDFHVTSSPSLRISNRRWGNNGYVRAGRQEASPAH
PPSSHDSSAGSSRQTTKNETAVSKVTVGRRAKRTLKREAADKAAAKKHQSHLLRLGRT*

Transcript Sequence

Transcript ID

Solyc01g008810.3.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT5G19430.6)
Sequence

TTGCCATCAACCTCCTCCTATATAGGATCATATCCTCGATATTTAAAACAAAAACACTAA
ACCATTTTTTCTCATCGATTTTAATAAAGCCATCTATCTATACATATATAACTACTCAAA
ATATTTCAAAATATCATTCTTTTTCCCTCTCTTATAAGCCGGCAAAGGGTGGGGGTTGAC
GAAAGGCGGCGGGTGGGTGGAACCCTAGATAAACATTGGTGTATACAACACTTATCCTTC
TTTTTCCCTCCATTTTAGGCCATGTCTACCGTTGTCGAGCTTGAGATTGAGGGGTCAGAA
CTCTTGAACAACTTTCAGGATTTGTCTATTGGAGAACAGACTGAAGTGGAGAGCAATTCT
GAGGAAAGGTACCAAGTCGATTGTGAGAACAATTATCATGGTGACTGTGCCATATGTTTG
AATAAGATAGTGCTCCAAGAAACTGCTCTTGTAAAAGGTTGCGAGCATGCTTACTGTGTG
ACATGCATCCTTCGGTGGGCAACCTACAAAAATGAACCAACATGCCCTCAGTGTAAACAT
CCATTTGAATTTCTCCACATCCATCGCTCCCTTGATGGAAGTATCCAGGACTACATGTTT
GAGGAGAGTGTTTGCCTTCTACTGAGAGCATCATGGTTTGAACCCTTTGTGGAGGAAATC
GATGATTACATGGATTATGAGGATGATGAAGAGCTAGAAGACTTCCATGTTACTAGTTCA
CCAAGTCTCCGCATAAGCAACAGGAGATGGGGCAATAATGGTTACGTCAGGGCAGGAAGG
CAAGAAGCAAGTCCTGCTCATCCACCAAGCTCCCATGACTCGAGCGCCGGATCATCACGC
CAGACTACGAAGAATGAGACTGCTGTTTCTAAAGTAACTGTTGGTCGGCGTGCAAAGAGG
ACACTCAAGCGTGAAGCTGCTGATAAGGCAGCTGCAAAAAAGCACCAGTCGCATTTACTG
AGGCTGGGTCGTACATGAGTTTACTCCATGTCTAACCTTGAAGATCATGACATAGTGAAT
CACCTCTGTACAATATCTCTAGGTCCTTCCATTTGTAGAGTAGTGCCCACCGTTTAGATG
ATGAGTTTGCTAGATGGCATGAACCATTTTAATGCCTGTTGATATCTCTTATTTCCACCA
TTATATGTACATTGTTAGGTGATTATTTTCATTTAAATCTTCCATTGTTGGAATGAAGTA
TAACATGACTGGAGGATTTAGCATTACTGGTGTTCGTTTTGCTATATTGAGTTTGTTCTG
CATAGCTTTTAGACTATTAATTGTGTTTTTTTTGTACTTCTGAAATGTTTTT