Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g008740.2.1
CDS Infomation	Calcium-dependent protein kinase, putative (AHRD V3.3 *** B9SJ93_RICCO)
Sequence	ATGGGGAATTGTTGCTCTAGTGGAGAAGAACAACAACCAAATGAAACAACCAACAACAAC AACAACAACGAAATCAACAACCCTAAAAATGTAGAAAACAATTCATCTACACAACATAAC AATCTTGATCAAAGTTCAACAACACCAACACCAACAAAAACATCTCCAAGTCCATCATCA AAACCCTCAAAACAATCACCAATAGGACTAGTATTAGGTAGACCAATGGAAGATGTTAGA TCAACATATACTATAGGTAAAGAGCTAGGTAGAGGACAATTTGGTGTAACACATTTATGT ACACAAAAACAAACAAATGAACAATATGCATGCAAAACAATAGCAAAGAGAAAACTAGTT AGCAAAGAAGATATTGAAGATGTTAGAAGAGAAGTACAAATAATGCATCATTTAACAGGT CAAGAAAACATTGTACAACTTAAAGGGGCTTATGAAGACAAACATAGTGTACATTTGGTC ATGGAATTATGTGCTGGTGGTGAACTTTTCGATAGAATTATCGCGAAAGGACATTATACA GAACGCGCTGCAGCTTCGTTGTTAAGAACAATTGTTCAAATTGTTGATACTTGTCATTCT ATGGGAGTTATACACAGAGATCTTAAGCCTGAAAATTTTTTACTACTTAGTAAAGATGAG AATGCACCTCTTAAGGCTACCGATTTCGGTCTTTCCGTCTTTTATAAGCAAGGAGATGTG TTTAAGGATATTGTAGGTAGTGCATATTATATTGCACCTGAAGTATTGAAAAGAAGATAT GGACCAGAAGTTGATATATGGAGTATTGGTGTTATGTTATATATTCTTCTTTGTGGAGTT CCTCCTTTTTGGGCAGAAAATGAAAATGGAATTTTCAATGCAATATTACGTGGACATATT GATTTTTCTAGTGATCCATGGCCTTCAATTTCAAGTGGAGCAAAAGACCTAGTCAGAAAG ATGTTAACTGTTGACCCTAGGCAGAGGTTAACAGCTATGCAAGTCCTAAATCATTCATGG ATCAAAGAAGATGGAGAAGCACCAGACACACCTCTTGATAATGCTGTATTACATAGACTC AAACAATTTAGAGCTATGAACAAATTCAAGAAAGTCGCTCTTCGGGTTATTGCAGGATGT TTATCAGAAGAAGAAATTATGGGATTGAAGCAAATGTTTAAAAATATGGATACTGATAAT AGTGGAACAATAACACTTGAGGAATTAAAACAAGGATTAGCCAAACAAGGGACTAAATTA TCTGATTATGAGATTAAACAACTAATGGAAGCAGCTGATGTTGATGGAAATGGAACAATA GACTATGAAGAGTTCATCACAGCAACAGTGCACATGAACAAAATGGATAGAGAAGAACAT CTTTACACTGCATTCCAATATTTTGATAAGGATCATAGTGGATATATATCAAGAGAAGAG TTAGAGCAAGCACTTAGAGAATTTGGTATGGATGATGAAAATGATCTAAGGGAAATCATT AACGAAGTTGATACTGATCATGATGGTCGAATCAATTATGATGAATTTGTAGCAATGATG AAGAAAGGAAATCCAGAGGCAGCAACAATGAATCCAAGAAAAAGAAGGGATTCATTTGTA GCATAA

Peptide Sequence

PEP ID	Solyc01g008740.2.1
PEP Infomation	Calcium-dependent protein kinase, putative (AHRD V3.3 *** B9SJ93_RICCO)
Sequence	MGNCCSSGEEQQPNETTNNNNNNEINNPKNVENNSSTQHNNLDQSSTTPTPTKTSPSPSS KPSKQSPIGLVLGRPMEDVRSTYTIGKELGRGQFGVTHLCTQKQTNEQYACKTIAKRKLV SKEDIEDVRREVQIMHHLTGQENIVQLKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYT ERAAASLLRTIVQIVDTCHSMGVIHRDLKPENFLLLSKDENAPLKATDFGLSVFYKQGDV FKDIVGSAYYIAPEVLKRRYGPEVDIWSIGVMLYILLCGVPPFWAENENGIFNAILRGHI DFSSDPWPSISSGAKDLVRKMLTVDPRQRLTAMQVLNHSWIKEDGEAPDTPLDNAVLHRL KQFRAMNKFKKVALRVIAGCLSEEEIMGLKQMFKNMDTDNSGTITLEELKQGLAKQGTKL SDYEIKQLMEAADVDGNGTIDYEEFITATVHMNKMDREEHLYTAFQYFDKDHSGYISREE LEQALREFGMDDENDLREIINEVDTDHDGRINYDEFVAMMKKGNPEAATMNPRKRRDSFV A*

Transcript Sequence

Transcript ID	Solyc01g008740.2.1
Transcript Infomation	Calcium-dependent protein kinase, putative (AHRD V3.3 *** B9SJ93_RICCO)
Sequence	TAATTTTTGGGTAAAAATTAATACACGCATATTATTTATAATAGTTTAGAAATATATATT TTTTTCGATTAATAAGTGTAAAGAGGCTAAATATTCCCTTAAAGTACGAAGACTAACTCC ATTTTTGCACCCTCTATTTTCTTTTATAGATGTAAATTAGGTGATAAAAAAATATATTTT ACGATATAAAATTCTCATTAATTCGTTATGAAAATTTTTTTTTATAGATATTAGACCAAA AAAAAATGGGAAATTAACATAATTTTTAAAACTTAATACTCCTCCCCAAATTACTTTGTG TACGTTTATTAAACTTTACTTACTATAAAAAAATAAACTTATAAAATTATTATTTACTAA AAATAGTAATTTCGAAAAGCACTCTAAACCCTCCATATTTATCACAAACATTTCTTTTTT CATCTCTTTATAAAAACAAATTAGGAACACTAAGAAATTTATTTAATTTTTTTTATAAAA AAAACAAAAGAAAGAAAACCAAGAAAATTGAAAAGAAAAAAACATTATTTTTTATTCCTA CAATTTCTCACAATCAATCTTAAGTAAAATTCATAATGAATATTTTCTCTTTAAACAATA ATTATTTCTTTTATTGACCCCCCAATTTTTTACTCATTTGATTCTAATACATTTTTTTGT TTTTCTAATTAATTTTCTTTTTCTATATTTGAGATTGAGGCGTAATAATTGTTATCGTTA TGGTATTGTTGAATCTCCTCTCAATTATTGTGTAATTTTTTCACCTTCATTTCTATGCAT TTAGGTTTGTTGTAATCTTATTCTCTCTGTTTGAGATTGAAGCGTAATAATTATTGACAT TACGTCGTTGTCAAATCGATCTCTCCCCGTTATTGTGTAGTTTCTTCACCTTCATTTATT TGCATTTAGGTTTGTTTTTAATTTCTTTCTGAGATTGAGGGCGTAATAATTATTTTCGTT ACGTCGTTGTTGAAATCTCTTTCCATTATTGTGTAATTTCCTCACCTTCATTTCTTTGCA TTTAGGTTTGTTTTAATCTCCTTCTTTCCTTTTTAAGATTGAGGCGTAATAATTGTTGTC ATTACGTCTTCGTTGTTGAACTCTTTTTGAGATTAAAGACGTAATAACAATTATCATTGC ATCGTTGCTGAATCTCTCCATAATTTCCTCACTTTTCATTTAAATCTATTCAAATCTCCT TCATTCTATTTCAGATCGAGACGTAATAATTGTCATCTTTACGTAATCTCTCTCTAATTA CTTTCCTTTCTTTTTTTTTCTATCCCCAAATAAAAAATGGGGAATTGTTGCTCTAGTGGA GAAGAACAACAACCAAATGAAACAACCAACAACAACAACAACAACGAAATCAACAACCCT AAAAATGTAGAAAACAATTCATCTACACAACATAACAATCTTGATCAAAGTTCAACAACA CCAACACCAACAAAAACATCTCCAAGTCCATCATCAAAACCCTCAAAACAATCACCAATA GGACTAGTATTAGGTAGACCAATGGAAGATGTTAGATCAACATATACTATAGGTAAAGAG CTAGGTAGAGGACAATTTGGTGTAACACATTTATGTACACAAAAACAAACAAATGAACAA TATGCATGCAAAACAATAGCAAAGAGAAAACTAGTTAGCAAAGAAGATATTGAAGATGTT AGAAGAGAAGTACAAATAATGCATCATTTAACAGGTCAAGAAAACATTGTACAACTTAAA GGGGCTTATGAAGACAAACATAGTGTACATTTGGTCATGGAATTATGTGCTGGTGGTGAA CTTTTCGATAGAATTATCGCGAAAGGACATTATACAGAACGCGCTGCAGCTTCGTTGTTA AGAACAATTGTTCAAATTGTTGATACTTGTCATTCTATGGGAGTTATACACAGAGATCTT AAGCCTGAAAATTTTTTACTACTTAGTAAAGATGAGAATGCACCTCTTAAGGCTACCGAT TTCGGTCTTTCCGTCTTTTATAAGCAAGGAGATGTGTTTAAGGATATTGTAGGTAGTGCA TATTATATTGCACCTGAAGTATTGAAAAGAAGATATGGACCAGAAGTTGATATATGGAGT ATTGGTGTTATGTTATATATTCTTCTTTGTGGAGTTCCTCCTTTTTGGGCAGAAAATGAA AATGGAATTTTCAATGCAATATTACGTGGACATATTGATTTTTCTAGTGATCCATGGCCT TCAATTTCAAGTGGAGCAAAAGACCTAGTCAGAAAGATGTTAACTGTTGACCCTAGGCAG AGGTTAACAGCTATGCAAGTCCTAAATCATTCATGGATCAAAGAAGATGGAGAAGCACCA GACACACCTCTTGATAATGCTGTATTACATAGACTCAAACAATTTAGAGCTATGAACAAA TTCAAGAAAGTCGCTCTTCGGGTTATTGCAGGATGTTTATCAGAAGAAGAAATTATGGGA TTGAAGCAAATGTTTAAAAATATGGATACTGATAATAGTGGAACAATAACACTTGAGGAA TTAAAACAAGGATTAGCCAAACAAGGGACTAAATTATCTGATTATGAGATTAAACAACTA ATGGAAGCAGCTGATGTTGATGGAAATGGAACAATAGACTATGAAGAGTTCATCACAGCA ACAGTGCACATGAACAAAATGGATAGAGAAGAACATCTTTACACTGCATTCCAATATTTT GATAAGGATCATAGTGGATATATATCAAGAGAAGAGTTAGAGCAAGCACTTAGAGAATTT GGTATGGATGATGAAAATGATCTAAGGGAAATCATTAACGAAGTTGATACTGATCATGAT GGTCGAATCAATTATGATGAATTTGTAGCAATGATGAAGAAAGGAAATCCAGAGGCAGCA ACAATGAATCCAAGAAAAAGAAGGGATTCATTTGTAGCATAAAGTAATTAATTTCATCAT CAAATGTATGAAAAAAATCAAAAAGACAATAGATTATTTGTTGTGATGAAATTAAAGAAG GATAAGATTGTAGATTTTATATAGGTATGTTGAAAAATACAATTTGGTTTTTAGGGTGGT TTGATTTGGATCAGGTACAGAAAGATCAGTAGTATTTTCATTTATTATTTAACGTGATTT AAATCCACAACTTATCAATTGATAATGTAAATGCTCAACTACTGAAGCAAACCTTGTTTT TCCCTGATCGAGATATGATGT