Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g008440.3.1
CDS Infomation

Calcium-dependent protein kinase (AHRD V3.3 *** F8V179_HEVBR)
Sequence

ATGGGTAATTGCTGTGTGAAACCGGGTAAATCTGCCGAAAAAAAGAATAAAAAGAACAAC
AGCAAACCTAACCCTTTTTCAATTGATTATGGGGGGACTAAACATGCCTCTGGGAGTGGA
AACAAGCTAGTTGTATTAAAAGAACCAACAGGGCAAAATATACATGATAAGTATGATTTG
GGGCATGAGCTCGGAAGAGGAGAATTTGGGGTTACTTATCTATGTACTGACTTGGAAGGA
GGAGAAAAATATGCTTGCAAATCGATATCTAAAAAGAAGCTAAGGACTGCAGTGGATATT
GATGATGTTAGGAGAGAGGTTGAGATCATGAAACATTTGCCTGTGCATCCGAATATTGTG
ACCTTGAAGGATACTTATGAGGATGATAATGCAGTGCACATTGTGATGGAATTGTGTGAG
GGTGGGGAGTTGTTTGATCGAATCGTTGCTAGAGGCCACTATACAGAGAGAGCAGCTGCT
GGAATTTTGAAGACTGTCGTGGAAGTCGTTCAGATGTGTCACAGGCAAGGGGTAATGCAT
CGTGATCTCAAACCTGAGAATTTTCTTTTTGGTAACAAGAAAGAAACAGCTCCACTGAAG
GCTATTGACTTTGGGTTGTCTGTTTTCTTTAAACCTGGGGAACGCTTTAATGAGATAGTG
GGAAGTCCTTATTACATGGCTCCTGAGGTCCTAAAGCGCAATTATGGACCAGAGGTCGAT
GTCTGGAGTGCTGGAGTTATACTTTACATTCTTCTATGCGGTGTTCCACCTTTCTGGGCA
GAGACTGAACAAGGAGTAGCCCAAGCGATTATTCGTTCTGTGATTGATTTCAAGAGGGAT
CCATGGCCTAAAGTTTCTGATAATGCAAAGGATCTTGTAAAGAAAATGCTTGATCCAGAT
CCAACTCGACGGCTCACAGCTCATCAAGTTCTTGAGCATCCCTGGTTACATAATATAAAG
AAAGCACCAAACGTCTCATTGGGTGAGACTGTTAAAGCAAGACTCAAGCAGTTTTCAGTA
ATGAACAAGCTCAAGAAAAAAGCTCTGACGGTTATAGCTGAGTTTTTGTCTGCGGAGGAA
GTCGCTGGAATGAAGGAAGCATTTGAAATGATGGATACCGGAAAGAAGGGCAAGATAAAC
CTGAATGAACTTAAAGATGGCTTGCAGAAGCTTGGCCATCAAATCCCTGATGCTGATCTT
CATATTCTCATGGAAGCGGCTGACGTTGATGGAGATGGAAGTTTAAATTATCCAGAGTTT
GTTGCTGTATCTATTCATCTTAGAAAGATGGCCAATGATGAACACCTGCACAAAGCATTT
TCATTTTTCGACAAAAATCAGAGTGGTTTCATAGAAATCGAAGAGCTTCGTAGTGCTTTG
AGGGATGAAGACGACAGCAACAGCGAGGAAGTCACCAATGCCATTATGCATGACGTTGAT
ACAGACAAGGATGGTCGGATTAGTTATGAGGAATTTGCTGCGATGATGAAGGCTGGTACG
GACTGGAGAAAAGCATCGAGACAGTATTCTCGTGAACGTTTTAACAGTCTAAGCTTAAAG
TTGATGAGGGAAGGCTCATTACAAGTTGAAAACAAAGTCTAG

Peptide Sequence

PEP ID

Solyc01g008440.3.1
PEP Infomation

Calcium-dependent protein kinase (AHRD V3.3 *** F8V179_HEVBR)
Sequence

MGNCCVKPGKSAEKKNKKNNSKPNPFSIDYGGTKHASGSGNKLVVLKEPTGQNIHDKYDL
GHELGRGEFGVTYLCTDLEGGEKYACKSISKKKLRTAVDIDDVRREVEIMKHLPVHPNIV
TLKDTYEDDNAVHIVMELCEGGELFDRIVARGHYTERAAAGILKTVVEVVQMCHRQGVMH
RDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVD
VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPD
PTRRLTAHQVLEHPWLHNIKKAPNVSLGETVKARLKQFSVMNKLKKKALTVIAEFLSAEE
VAGMKEAFEMMDTGKKGKINLNELKDGLQKLGHQIPDADLHILMEAADVDGDGSLNYPEF
VAVSIHLRKMANDEHLHKAFSFFDKNQSGFIEIEELRSALRDEDDSNSEEVTNAIMHDVD
TDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMREGSLQVENKV*

Transcript Sequence

Transcript ID

Solyc01g008440.3.1
Transcript Infomation

Calcium-dependent protein kinase (AHRD V3.3 *** F8V179_HEVBR)
Sequence

ATTAGAAAAAGGCTATAGAAAGAAGCCAAAGACAAAGAAAGGGGAAATTGCAGGAGAGAA
AACTTTTCTCTTTTCTCTCTGCAAAACAAAACAAAAAAAAAAGCTTTAATTCTCTCCTGT
CAATGGCGGATTTTGTTTCATATATTCATAAAACCTTCCTATCATTTTCCTTTTATTTCT
TTTTCTCTAATTTTTAGTTTTTTTCTCTTTTTTTTACCCCTTTTTTGGTCTATAATTGAA
AAAAAATCAACAATTTTCAGAGTGTAAACAGCCGGTGCGGGTAAGTTTTTTTTCATTTTT
CAGGTGGATTTGCTGCATTTGAGTGTTCTTTTAGCTTTCATTGCTTGTGTATTTCCTTAA
TTTGTTACCCCTTGTAAAAAAAAAGTTAATCTTTTACTGGAATGAAAAGTATTTGATTTT
CACAGAATCTGAATAATTTCCAGGATTCTTGGAGATTTTGTATTCTTGGGAATTTTGAAT
TAACAGCTAGGATTTTGTTGTTGTATGAACAGTAGTATCATATATATTATTGACTTATCA
AGGATTGTGTGTAAAAAAAATGGAGAAAAAGTACTTAGTTGTCTAAAGAATCAATTTTTT
TTTCAGGAGTTGGTTGATCTTATAAAGTATCATGGGTAATTGCTGTGTGAAACCGGGTAA
ATCTGCCGAAAAAAAGAATAAAAAGAACAACAGCAAACCTAACCCTTTTTCAATTGATTA
TGGGGGGACTAAACATGCCTCTGGGAGTGGAAACAAGCTAGTTGTATTAAAAGAACCAAC
AGGGCAAAATATACATGATAAGTATGATTTGGGGCATGAGCTCGGAAGAGGAGAATTTGG
GGTTACTTATCTATGTACTGACTTGGAAGGAGGAGAAAAATATGCTTGCAAATCGATATC
TAAAAAGAAGCTAAGGACTGCAGTGGATATTGATGATGTTAGGAGAGAGGTTGAGATCAT
GAAACATTTGCCTGTGCATCCGAATATTGTGACCTTGAAGGATACTTATGAGGATGATAA
TGCAGTGCACATTGTGATGGAATTGTGTGAGGGTGGGGAGTTGTTTGATCGAATCGTTGC
TAGAGGCCACTATACAGAGAGAGCAGCTGCTGGAATTTTGAAGACTGTCGTGGAAGTCGT
TCAGATGTGTCACAGGCAAGGGGTAATGCATCGTGATCTCAAACCTGAGAATTTTCTTTT
TGGTAACAAGAAAGAAACAGCTCCACTGAAGGCTATTGACTTTGGGTTGTCTGTTTTCTT
TAAACCTGGGGAACGCTTTAATGAGATAGTGGGAAGTCCTTATTACATGGCTCCTGAGGT
CCTAAAGCGCAATTATGGACCAGAGGTCGATGTCTGGAGTGCTGGAGTTATACTTTACAT
TCTTCTATGCGGTGTTCCACCTTTCTGGGCAGAGACTGAACAAGGAGTAGCCCAAGCGAT
TATTCGTTCTGTGATTGATTTCAAGAGGGATCCATGGCCTAAAGTTTCTGATAATGCAAA
GGATCTTGTAAAGAAAATGCTTGATCCAGATCCAACTCGACGGCTCACAGCTCATCAAGT
TCTTGAGCATCCCTGGTTACATAATATAAAGAAAGCACCAAACGTCTCATTGGGTGAGAC
TGTTAAAGCAAGACTCAAGCAGTTTTCAGTAATGAACAAGCTCAAGAAAAAAGCTCTGAC
GGTTATAGCTGAGTTTTTGTCTGCGGAGGAAGTCGCTGGAATGAAGGAAGCATTTGAAAT
GATGGATACCGGAAAGAAGGGCAAGATAAACCTGAATGAACTTAAAGATGGCTTGCAGAA
GCTTGGCCATCAAATCCCTGATGCTGATCTTCATATTCTCATGGAAGCGGCTGACGTTGA
TGGAGATGGAAGTTTAAATTATCCAGAGTTTGTTGCTGTATCTATTCATCTTAGAAAGAT
GGCCAATGATGAACACCTGCACAAAGCATTTTCATTTTTCGACAAAAATCAGAGTGGTTT
CATAGAAATCGAAGAGCTTCGTAGTGCTTTGAGGGATGAAGACGACAGCAACAGCGAGGA
AGTCACCAATGCCATTATGCATGACGTTGATACAGACAAGGATGGTCGGATTAGTTATGA
GGAATTTGCTGCGATGATGAAGGCTGGTACGGACTGGAGAAAAGCATCGAGACAGTATTC
TCGTGAACGTTTTAACAGTCTAAGCTTAAAGTTGATGAGGGAAGGCTCATTACAAGTTGA
AAACAAAGTCTAGATCATCAAAATCCAGAAGAAAGAAATGTTAAAAAGAGGAGAAAAATA
TTTTTTTTTTCTTTAATACAAATATATATCTTCTTTTTTTTTTTTTCCTTTTTATCATTG
AGCATGAAATTTTTTATTTTATTTTTTCCACTCTAAACTCCATATAGGCATATCCTTGGA
CTGTATGTGTAAATCTAACAAACTAGGTTTATTTTACTTGTAAATATATGGAATCAGAGA
TCATGAAAAAAAATATTATACTTTCTTCTTAGACA