Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g008330.3.1
CDS Infomation

Biotin Carboxylase (AHRD V3.3 *** A0A0R5QP93_SALMI)
Sequence

ATGGATTCTGCAGCCATGACTAGCGTTTGTGGCAAATCTGCTCTTTGCTCTACTCCCGGT
TTATTTTTGGGGAGAACGAACGGTATTAGGAGCTCGCAGTGTAGCTTTATAGCTGGAAAT
AGGATAAACTTTCCAAGGCAGACAGCTCAAGCACACAGAGTTCGTACTAATTCTCGCAAG
GGTCATGGTGCTCTTACTGTGACATGCCGCGCCGAGAAAATTCTGGTGGCAAATAGAGGA
GAGATTGCTGTTCGCGTGATCCGAACTGCCCATGAGATGGGAATTCCTTGTGTTGCGGTT
TATTCGACCATTGATAAAGATGCCTTACATGTGAAGCTAGCTGATGAATCTGTTTGCATT
GGAGAAGCACCAAGTAATCAGTCGTATTTAGTGATCCCAAATGTCTTGTCTGCTGCTATC
AGTCGCGGATGTACAATGTTGCATCCTGGATATGGTTTCCTTTCTGAGAATGCAAGTTTT
GTTGAGATGTGCAGAGAACATGGAATCAACTTTATTGGGCCAAATCCAGACAGCATAAGA
GTCATGGGTGACAAAGCCACTGCTAGAGATACAATGAAGAATGCTGGTGTTCCAACTGTA
CCAGGAAGTGACGGACTATTGCAGAGTACTGAAGAAGGTGTAAAGCTTGCCGAGGAGATT
GGTTACCCCGTGATGATTAAGGCAACAGCTGGTGGTGGTGGACGTGGAATGCGTCTTGCT
AAAGAACCTAATGAGTTCGTAAAATTATTGCAGCAAGCTAAGAGTGAAGCAGCAGCTGCA
TTTGGAAATGATGGCGTTTATCTGGAGAAGTACATCGTAAATCCCAGGCACATTGAATTT
CAGGTTTTGGCGGACAAGTATGGTAATGTTGTACACTTTGGAGAGCGTGATTGCAGTATT
CAGAGAAGAAACCAAAAGTTGCTGGAGGAAGCACCATCCCCGGCATTGACACCAGAGCTG
AGGAAAGCCATGGGTGATGCAGCTGTGGCAGCAGCAGCATCTATAGGTTACATTGGTGTT
GGAACCATAGAGTTCCTATTGGATGAGAGAGGCTCCTTTTACTTCATGGAAATGAACACT
CGTATTCAGGTAGAGCATCCGGTGACAGAAATGATATCCTCTGTTGATCTGATAGAGGAA
CAGATCCGTGTCGCTATGGGAGAAAAGCTCCGATACAAACAGGAGGATATTGTGCTTAGA
GGACATTCAATTGAATGCCGTATAAACGCAGAAGATGCTTTCAAAAACTTCAGACCCGGC
CCAGGGAGAATCACTTCATATTTACCAGCTGGAGGTCCATTTACGCGTATGGATAGCCAT
GTTTATCCTGACTATGTGGTTCCACCTAGCTACGATTCCCTGCTAGGAAAGCTCATCGTA
TGGGCTCCAACACGCGAGAGGGCTATTGAGCGCATGAAAAGAGCACTTGATGACACCGTT
ATCACTGGAGTTCCTACCACAATAGAATATCATAAACTCATCCTTGATATCGAGGACTTT
AAGAACGGGAAAGTTGATACTGCTTTCATTCCAAAGCATGAGGAAGAGTTAGCTCCGCCT
CAGCAAATTGTTCCAGCAGCAAGCAAGGAGCTGATCAATGCCAATGCTTAA

Peptide Sequence

PEP ID

Solyc01g008330.3.1
PEP Infomation

Biotin Carboxylase (AHRD V3.3 *** A0A0R5QP93_SALMI)
Sequence

MDSAAMTSVCGKSALCSTPGLFLGRTNGIRSSQCSFIAGNRINFPRQTAQAHRVRTNSRK
GHGALTVTCRAEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCI
GEAPSNQSYLVIPNVLSAAISRGCTMLHPGYGFLSENASFVEMCREHGINFIGPNPDSIR
VMGDKATARDTMKNAGVPTVPGSDGLLQSTEEGVKLAEEIGYPVMIKATAGGGGRGMRLA
KEPNEFVKLLQQAKSEAAAAFGNDGVYLEKYIVNPRHIEFQVLADKYGNVVHFGERDCSI
QRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTIEFLLDERGSFYFMEMNT
RIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKNFRPG
PGRITSYLPAGGPFTRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALDDTV
ITGVPTTIEYHKLILDIEDFKNGKVDTAFIPKHEEELAPPQQIVPAASKELINANA*

Transcript Sequence

Transcript ID

Solyc01g008330.3.1
Transcript Infomation

Biotin Carboxylase (AHRD V3.3 *** A0A0R5QP93_SALMI)
Sequence

TAAATCACAAAGCCCATTAGCAGCTAAAACCTGTAACACAGTTTTTGGCGGACCTTTCAA
TCTTGTTTGGAACAGAGTCTTCAGTTTTATTGCTTTCTTGTTTTCATCGACATCATCAAC
TTTCTCATTCTTCAAATCTACCGCACACCCACCTCCTCATTCATTCTCATTTCTCTGTCA
GAGTAGTAATTGTTCTTGCAGGAAGACAGGAATCGGATTACATTGATCAGGAAATGGATT
CTGCAGCCATGACTAGCGTTTGTGGCAAATCTGCTCTTTGCTCTACTCCCGGTTTATTTT
TGGGGAGAACGAACGGTATTAGGAGCTCGCAGTGTAGCTTTATAGCTGGAAATAGGATAA
ACTTTCCAAGGCAGACAGCTCAAGCACACAGAGTTCGTACTAATTCTCGCAAGGGTCATG
GTGCTCTTACTGTGACATGCCGCGCCGAGAAAATTCTGGTGGCAAATAGAGGAGAGATTG
CTGTTCGCGTGATCCGAACTGCCCATGAGATGGGAATTCCTTGTGTTGCGGTTTATTCGA
CCATTGATAAAGATGCCTTACATGTGAAGCTAGCTGATGAATCTGTTTGCATTGGAGAAG
CACCAAGTAATCAGTCGTATTTAGTGATCCCAAATGTCTTGTCTGCTGCTATCAGTCGCG
GATGTACAATGTTGCATCCTGGATATGGTTTCCTTTCTGAGAATGCAAGTTTTGTTGAGA
TGTGCAGAGAACATGGAATCAACTTTATTGGGCCAAATCCAGACAGCATAAGAGTCATGG
GTGACAAAGCCACTGCTAGAGATACAATGAAGAATGCTGGTGTTCCAACTGTACCAGGAA
GTGACGGACTATTGCAGAGTACTGAAGAAGGTGTAAAGCTTGCCGAGGAGATTGGTTACC
CCGTGATGATTAAGGCAACAGCTGGTGGTGGTGGACGTGGAATGCGTCTTGCTAAAGAAC
CTAATGAGTTCGTAAAATTATTGCAGCAAGCTAAGAGTGAAGCAGCAGCTGCATTTGGAA
ATGATGGCGTTTATCTGGAGAAGTACATCGTAAATCCCAGGCACATTGAATTTCAGGTTT
TGGCGGACAAGTATGGTAATGTTGTACACTTTGGAGAGCGTGATTGCAGTATTCAGAGAA
GAAACCAAAAGTTGCTGGAGGAAGCACCATCCCCGGCATTGACACCAGAGCTGAGGAAAG
CCATGGGTGATGCAGCTGTGGCAGCAGCAGCATCTATAGGTTACATTGGTGTTGGAACCA
TAGAGTTCCTATTGGATGAGAGAGGCTCCTTTTACTTCATGGAAATGAACACTCGTATTC
AGGTAGAGCATCCGGTGACAGAAATGATATCCTCTGTTGATCTGATAGAGGAACAGATCC
GTGTCGCTATGGGAGAAAAGCTCCGATACAAACAGGAGGATATTGTGCTTAGAGGACATT
CAATTGAATGCCGTATAAACGCAGAAGATGCTTTCAAAAACTTCAGACCCGGCCCAGGGA
GAATCACTTCATATTTACCAGCTGGAGGTCCATTTACGCGTATGGATAGCCATGTTTATC
CTGACTATGTGGTTCCACCTAGCTACGATTCCCTGCTAGGAAAGCTCATCGTATGGGCTC
CAACACGCGAGAGGGCTATTGAGCGCATGAAAAGAGCACTTGATGACACCGTTATCACTG
GAGTTCCTACCACAATAGAATATCATAAACTCATCCTTGATATCGAGGACTTTAAGAACG
GGAAAGTTGATACTGCTTTCATTCCAAAGCATGAGGAAGAGTTAGCTCCGCCTCAGCAAA
TTGTTCCAGCAGCAAGCAAGGAGCTGATCAATGCCAATGCTTAATTATTCTTCTATTTTA
GTTTTAGTTTTTTCTTCTTTGATTTTCTTACTTCATCAAGTGAATATAGTTTAAGAACAT
TACTCTCATTGGAACTTGAAGTGAGTGCATTTTTGGATATAACTTTCATCTCCTTTTATC
TTTAGCTTGTTGTATTTAAAGATACACAAGACTGAATGAAATTATTCTCTTTTTATAAAT
TTATCTTATTATGTGATTTCAAGAAAATACAGAAGATTGAGTATTGAGTGTA