Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g008320.3.1
CDS Infomation	shoot gravitropism 2 (SGR2) (AHRD V3.3 *** AT1G31480.1)
Sequence	ATGGCATCTGTTTCTGGGTCGAAAGGTGAGATCGATGAAACCTCTCCTGACATGTTGAAG AACACACCATCAAATATTAGGAGGTTAGCAGATGAGATTGAACACTTAGAGGGGAGGCAA AAGTACCTTGCTCAGACTAGAAGTCCGTCAGATGGTGGTGATGTTCGTTGGTATTTCTGC AAGATGCCTTTGGCAGTAAACCAGCCTGCTGCAGCAGTCCCCAAAACAGAAGTAGTGGGA AAGGGTGATTACTTTAGATTTGGCTTGAGAGATTCTCTTGCAATTGAGGCTTCTTTCTTG CAGAGAGAGGATGAGTTGCTTTCTTCTTGGTGGGAAGAGTATGGGGAGTGCAGTGTGGGT CCAAAGGGGGCACCAAATAGATTCAATTCTGCATCAGAAATATCTTCTCCGGAGAGCTCT CAAGCACATGAAGATTTAGTTGAAGAAGAAAGAGTTGGAGTCCCTGTTAAGGGGGGCCTG TATGAGGTAGATTTGGTAAAGAGACACTGTTTTCCTGTTTACTGGAATGGAGAAGATCGT CGTGTCTTAAGAGGTCACTGGTTCGCTCGTAAAGGGGGTCTGGATTGGCTTCCACTACGT GAAGATGTTGCTGAGCAGTTGGAGTTTGCATATCGGAGTAAGGTTTGGCATAGAAGAACC TTTCAGCCGTCAGGGCTCTATGCAGCTCGAGTTGATATGCAGGGTTTCGCCCCGGGACTG CATGCTATTTTCACTGGAGAAGATGATACTTGGGAAGCCTGGCTTAATGCTGATGCCTCT GGTTTCTCAGGTGCTATAGGATTTGGGGGGAATGGTGTTAAGCTAAGGCGTGGATATGCT CTTCCTCAGTCCCCGAAACCAACACAGGACGAAGTACGTCAACAGAAGGAGGAAGAAATG GATGATTACTGCTCACAGGTTCCTGTTCGACATCTGGTGTTCATGGTTCACGGGATTGGT CAAAGGTTGGAAAAATCAAATCTTGTGGATGATGTTAGTGACTTCCGCCATATTACGTCA ATCCTGGCTGAACGACACTTAACCTCATACCAACGTGGCACTCAGAGAGTTCTGTTCATC CCATGCCAGTGGAGGAAGGGCTTAAAGCTTAGTGGTGAGGCTGCAGTTGAACGATGTACT TTAGATGGTGTACGGGGATTGCGCGTACTGTTGAGTGCAACAGTGCATGATGTGCTGTAT TACATGAGCCCCATTTACTGCCAGGCTATTATTGACTCGGTCTCCAACCAGTTGAATATG TTATACTTAAAGTTTCTCAAGAGGAATCCCGGTTATAGTGGAAAGGTTTCTTTGTATGGT CATTCCCTTGGGAGCGTTTTGTCATATGATATCCTATGCCACCAAACAACACTGTCATCC CCTTTTCCCATGGAGTGGATGTACAAAGAACAAAATGAGAATGAATCGTCTCAGCAGGAT CAGAGCAACCTATCTTTAGACCAAAACTCTGCCTTAAGCTCAGATGATGAAACTTCTATT AGGAAGGGAAATAAGAGTGATCTGTCAGATAAAGACAAAATGAATGTAGAACCAAGTTTG TCAGAGTCTGTGGAAGATCGTACTGAAGATTTTTGTCATCCTGTGGGCCCTCCTGCTTCA TCAGACTCAGACGAACCAGTTGCAAGCGATGATATCAGGGAACCTAATGATTCCTCAGCA AATGAAAATTTTCGTGAAACTCCTATTGATGAGAGGGACACTATAAATGATGCCGAGAAT GTGGAGGATGGAATTTTTGAGTTTAATCAAAAGATTGATGAGGGAGTATCTGAATGTGAA AAAGACAGAACAATCAATTCCCTGAGGAAAGAGATTGATATGCTGAGAGCGAAAATCCAA GAATTAGACACCGAGTGTATAAAGAAAGGATGTGTAATGGAAGCAGAAAATGGAGGAACA AACGCAGCTACAAGAAATCAATCTATTCCTGAGGAAAGTGATTCAGCAAAGAGTTATACC CCGCAATTAAGATACACAAAGTTGAAATTCAAGGTGGATACATTTTTTGCTGTGGGATCC CCTCTTGGTGTTTTTCTATCCCTCCGAAATGTTCGTATTGGGATCGGCAAGGGGAAAGAC TACTGGGAAGAGGATAACATAGTTGAAGAGATGCCAGCTTGTCGACAAATGTTCAACATA TTCCATCCTTTTGATCCAGTGGCATACAGAATAGAACCACTCGTCTGTAAAGAATATCTC AACAAACGCCCCGTCATTATACCCTACCACAGAGGTGGGAAACGGCTGCATGTTGGTTTT CAGGAATTTAAAGAAGAAGTATCTTTGCGCTCACATGCTTTTGTGAACAATATAAATACT GTGAAGGTAAAGGTGATCACTCTTTGTCAATCAAGAGACAAGGATGGCGAAGATGAGGGT TCCCAAGAGTCTCAGGAGATAGAAGAGAGGTCATATGGCTCAATTATGATGGAGAGATTA ACTGGGAATGAAGATGGTCGAATAGATCATGTTTTACAAGATAAAACATTTCGGCATGCA TACATTTCAACCCTTGGAGCACACACGAACTACTGGAGAGATAACGATACAGCTCTTTTT ATGCTGAAACACTTGTATCGGGATATACCAGAGGATTCCTACTCGTCTTGTGAACCTGTG GAAGGAAGTTCAAAGGATGATAGAGATACAACGACCTGGTATGATCAACGAGAGGAGGTT GATGAAGAATTCCCATTAACATTTGCGGACAAAGTAACTGTGAAAAGTTTTTCTCACAAA GCCCGGAGAACTTTGAAGTGGTGA

Peptide Sequence

PEP ID	Solyc01g008320.3.1
PEP Infomation	shoot gravitropism 2 (SGR2) (AHRD V3.3 *** AT1G31480.1)
Sequence	MASVSGSKGEIDETSPDMLKNTPSNIRRLADEIEHLEGRQKYLAQTRSPSDGGDVRWYFC KMPLAVNQPAAAVPKTEVVGKGDYFRFGLRDSLAIEASFLQREDELLSSWWEEYGECSVG PKGAPNRFNSASEISSPESSQAHEDLVEEERVGVPVKGGLYEVDLVKRHCFPVYWNGEDR RVLRGHWFARKGGLDWLPLREDVAEQLEFAYRSKVWHRRTFQPSGLYAARVDMQGFAPGL HAIFTGEDDTWEAWLNADASGFSGAIGFGGNGVKLRRGYALPQSPKPTQDEVRQQKEEEM DDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVSDFRHITSILAERHLTSYQRGTQRVLFI PCQWRKGLKLSGEAAVERCTLDGVRGLRVLLSATVHDVLYYMSPIYCQAIIDSVSNQLNM LYLKFLKRNPGYSGKVSLYGHSLGSVLSYDILCHQTTLSSPFPMEWMYKEQNENESSQQD QSNLSLDQNSALSSDDETSIRKGNKSDLSDKDKMNVEPSLSESVEDRTEDFCHPVGPPAS SDSDEPVASDDIREPNDSSANENFRETPIDERDTINDAENVEDGIFEFNQKIDEGVSECE KDRTINSLRKEIDMLRAKIQELDTECIKKGCVMEAENGGTNAATRNQSIPEESDSAKSYT PQLRYTKLKFKVDTFFAVGSPLGVFLSLRNVRIGIGKGKDYWEEDNIVEEMPACRQMFNI FHPFDPVAYRIEPLVCKEYLNKRPVIIPYHRGGKRLHVGFQEFKEEVSLRSHAFVNNINT VKVKVITLCQSRDKDGEDEGSQESQEIEERSYGSIMMERLTGNEDGRIDHVLQDKTFRHA YISTLGAHTNYWRDNDTALFMLKHLYRDIPEDSYSSCEPVEGSSKDDRDTTTWYDQREEV DEEFPLTFADKVTVKSFSHKARRTLKW*

Transcript Sequence

Transcript ID	Solyc01g008320.3.1
Transcript Infomation	shoot gravitropism 2 (SGR2) (AHRD V3.3 *** AT1G31480.1)
Sequence	TCAATTTTAAAATAAATTTATTTAATATCTAACAAAATAAAAATTCCAAAATTAATTATT ACGATAACTTATTTCCAATCAAACTTCGAAAATGATAGAAGATGAAAATTGAACAAGGTT AAACCATTAATTTCCATTTTCAATGAGTTTTTAACAGAATATTCCTTCTATAAACTTAAT ACATTCTTCTGGTTTCTTCTATCTCCTTTCCACCCTTTTTTTTTTTTTACAATTCAATAT CCTCATTCAACACGATTCAATTGCCTTGTTAGATTCTAAATCTAAAATTTACACGAAAAA ATAGTACAAAATCCTCTCTGAGAATCCAGAAAACCCTTTAATTCTTGATTTTCAGGTATT AGTTGACTGTGTTTGGACTTTTCACTTTTGTGAGGTTAAGGTTGAGGAGGAGGAGGACTG AGATTTCTGAGATTGTATTTTGTTGATGCTGATGCTGCTTACCTGTTTTTATTTTGTAGG TATTAGTTGACTCTTTTTGGACTTTTCACTTCTGTGGGGTTGAGGACGAGGAGTTGACTG GTAGAGAGGTGTTTGGACTTTTGTGAGGTTGAGGTTCAGGAGGAGGAAATGGCATCTGTT TCTGGGTCGAAAGGTGAGATCGATGAAACCTCTCCTGACATGTTGAAGAACACACCATCA AATATTAGGAGGTTAGCAGATGAGATTGAACACTTAGAGGGGAGGCAAAAGTACCTTGCT CAGACTAGAAGTCCGTCAGATGGTGGTGATGTTCGTTGGTATTTCTGCAAGATGCCTTTG GCAGTAAACCAGCCTGCTGCAGCAGTCCCCAAAACAGAAGTAGTGGGAAAGGGTGATTAC TTTAGATTTGGCTTGAGAGATTCTCTTGCAATTGAGGCTTCTTTCTTGCAGAGAGAGGAT GAGTTGCTTTCTTCTTGGTGGGAAGAGTATGGGGAGTGCAGTGTGGGTCCAAAGGGGGCA CCAAATAGATTCAATTCTGCATCAGAAATATCTTCTCCGGAGAGCTCTCAAGCACATGAA GATTTAGTTGAAGAAGAAAGAGTTGGAGTCCCTGTTAAGGGGGGCCTGTATGAGGTAGAT TTGGTAAAGAGACACTGTTTTCCTGTTTACTGGAATGGAGAAGATCGTCGTGTCTTAAGA GGTCACTGGTTCGCTCGTAAAGGGGGTCTGGATTGGCTTCCACTACGTGAAGATGTTGCT GAGCAGTTGGAGTTTGCATATCGGAGTAAGGTTTGGCATAGAAGAACCTTTCAGCCGTCA GGGCTCTATGCAGCTCGAGTTGATATGCAGGGTTTCGCCCCGGGACTGCATGCTATTTTC ACTGGAGAAGATGATACTTGGGAAGCCTGGCTTAATGCTGATGCCTCTGGTTTCTCAGGT GCTATAGGATTTGGGGGGAATGGTGTTAAGCTAAGGCGTGGATATGCTCTTCCTCAGTCC CCGAAACCAACACAGGACGAAGTACGTCAACAGAAGGAGGAAGAAATGGATGATTACTGC TCACAGGTTCCTGTTCGACATCTGGTGTTCATGGTTCACGGGATTGGTCAAAGGTTGGAA AAATCAAATCTTGTGGATGATGTTAGTGACTTCCGCCATATTACGTCAATCCTGGCTGAA CGACACTTAACCTCATACCAACGTGGCACTCAGAGAGTTCTGTTCATCCCATGCCAGTGG AGGAAGGGCTTAAAGCTTAGTGGTGAGGCTGCAGTTGAACGATGTACTTTAGATGGTGTA CGGGGATTGCGCGTACTGTTGAGTGCAACAGTGCATGATGTGCTGTATTACATGAGCCCC ATTTACTGCCAGGCTATTATTGACTCGGTCTCCAACCAGTTGAATATGTTATACTTAAAG TTTCTCAAGAGGAATCCCGGTTATAGTGGAAAGGTTTCTTTGTATGGTCATTCCCTTGGG AGCGTTTTGTCATATGATATCCTATGCCACCAAACAACACTGTCATCCCCTTTTCCCATG GAGTGGATGTACAAAGAACAAAATGAGAATGAATCGTCTCAGCAGGATCAGAGCAACCTA TCTTTAGACCAAAACTCTGCCTTAAGCTCAGATGATGAAACTTCTATTAGGAAGGGAAAT AAGAGTGATCTGTCAGATAAAGACAAAATGAATGTAGAACCAAGTTTGTCAGAGTCTGTG GAAGATCGTACTGAAGATTTTTGTCATCCTGTGGGCCCTCCTGCTTCATCAGACTCAGAC GAACCAGTTGCAAGCGATGATATCAGGGAACCTAATGATTCCTCAGCAAATGAAAATTTT CGTGAAACTCCTATTGATGAGAGGGACACTATAAATGATGCCGAGAATGTGGAGGATGGA ATTTTTGAGTTTAATCAAAAGATTGATGAGGGAGTATCTGAATGTGAAAAAGACAGAACA ATCAATTCCCTGAGGAAAGAGATTGATATGCTGAGAGCGAAAATCCAAGAATTAGACACC GAGTGTATAAAGAAAGGATGTGTAATGGAAGCAGAAAATGGAGGAACAAACGCAGCTACA AGAAATCAATCTATTCCTGAGGAAAGTGATTCAGCAAAGAGTTATACCCCGCAATTAAGA TACACAAAGTTGAAATTCAAGGTGGATACATTTTTTGCTGTGGGATCCCCTCTTGGTGTT TTTCTATCCCTCCGAAATGTTCGTATTGGGATCGGCAAGGGGAAAGACTACTGGGAAGAG GATAACATAGTTGAAGAGATGCCAGCTTGTCGACAAATGTTCAACATATTCCATCCTTTT GATCCAGTGGCATACAGAATAGAACCACTCGTCTGTAAAGAATATCTCAACAAACGCCCC GTCATTATACCCTACCACAGAGGTGGGAAACGGCTGCATGTTGGTTTTCAGGAATTTAAA GAAGAAGTATCTTTGCGCTCACATGCTTTTGTGAACAATATAAATACTGTGAAGGTAAAG GTGATCACTCTTTGTCAATCAAGAGACAAGGATGGCGAAGATGAGGGTTCCCAAGAGTCT CAGGAGATAGAAGAGAGGTCATATGGCTCAATTATGATGGAGAGATTAACTGGGAATGAA GATGGTCGAATAGATCATGTTTTACAAGATAAAACATTTCGGCATGCATACATTTCAACC CTTGGAGCACACACGAACTACTGGAGAGATAACGATACAGCTCTTTTTATGCTGAAACAC TTGTATCGGGATATACCAGAGGATTCCTACTCGTCTTGTGAACCTGTGGAAGGAAGTTCA AAGGATGATAGAGATACAACGACCTGGTATGATCAACGAGAGGAGGTTGATGAAGAATTC CCATTAACATTTGCGGACAAAGTAACTGTGAAAAGTTTTTCTCACAAAGCCCGGAGAACT TTGAAGTGGTGAATCATGCTTTGATCTCTTTTAAACTTGGAGATGCAGAAAAACACCAAT TCTGGACTTATGCTACTTCAACACTAATCAGTGTAAAAGCACAAGTTCTTTGTATACCAG TGCTCTAACAAGGAGAGTGTTGAAGGTATATCTGTCTTGTGCAAGCGCGGTCTGGAAATA CCTTGTACTGTTTCAGAATATGATGTAAACGAAGGTATTTCTCCGCAGCTGTGATCTTTA ACTGTCTTCTGTAAGACTGATCTTCGTCTTAAAAGGAAGACGAGAAACATAAGATCGATC CTCCGGTGTATACAGTGAAAAAGGATATGCTCATGTGACTTGAGCCATGTATGAATGCTT GTTTTTTATATGTGAATTTCTGGCACTAAACATGTAAATATATGTAGCTGTTAGAAAGTG ACAATATGCATGCTTAGTTTTATGTGTTTTATTGTCATTTTCCTCTTTGGACATTTACCT AGTTCATGTTCACCCCTCAATTCTTCTCGTTATCGCTTCGTTGTGGAACCGTTGCGATCT ACTTTGATTCGAAAAATGGGCTTGAGA