Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g007930.3.1
CDS Infomation

F-box family protein (AHRD V3.3 *** AT1G70590.1)
Sequence

ATGAATCAGAAAACATGGCCGGCGACCAAGTCCAGTTCCGACGGCCTTCGTCGTTTCACC
GCTTTCCCTTTCATCAGAAAACAGACCCATCTTCAAAATCGTCCATCGGAAAACCCCTTT
TCCGATCACTCCAAAAAGATCAATACAACAACTCCTCCATCATCATCAAATTCTTGTTGC
AGTAGTAGTAGTAGTAGTAATCAGTACTGCTACAATCAAGACTTTTCTCAGCTACCCTAC
GATATTATCTTGAAAATTGCTGCTAGGTTTTCGCTGTCGAATGTACGGGCATCTTCTCTA
GTATGCAGGTCTTGGTGCGAGGCACTTCGACCTTTAAGAGAATCTATGGTTTTTCTCAGA
TGGGGTAAGAGATTTAAGCATGGAAGAGGTGGGGTTAAGCGTAATTTGAGTAAAGCCCTT
GATTCTTTCCTTAAAGGAGCTGCTCGTGGGTCTACACTAGCTATGGTGGATGCTGGGTTA
CTTTATTGGGAGTTGGGGAAAAGAGAAGAAGGGATTAGTTTGTACAGAAAAGCTGCTGAG
CTTGGTGACCCTGCTGGTCAGTGCAATTTGGGGATTTCTCTATTGCAAGTGAATCCTATG
GACCCCAAGGAAGCTGTTAAATGGCTTTATAAAGCTTCCGTTTCTGGTCATGTTCGTGCT
CAATACCAGCTTGCACTTACTTTACATAAAGGTCATGGTCCGAAGAGAAATCTCCAGGAA
ACGGCAAAGTGGTACTTGAGGGCAGCAGAAGGTGGATATGTCCGCGCTATGTATAACACA
GCATTATGCTACTCGGTTGGAGAAGGTTTAATGCAGTCTCATGAATTATCAAGAAAATGG
ATGAAGAGAGCAGCTGATCGAGGTCATAGCAAAGCCCAGCTTGAGAATGGGTTGAGTCTG
TATTCTGATGGGGATAGGATGCAAGCTGTGGTATATCTGGAACTTGCTGCTCGCGCTGGT
GAAGCTGCAGCTCATCCCGTGAAAAATGTTATACTTCAACAGATGTCGACTTTTTCTCGA
GATCACGCTATGCTTCTTGTCAATAGCTGGCGCTCTTTACCTTCATCGCACTGA

Peptide Sequence

PEP ID

Solyc01g007930.3.1
PEP Infomation

F-box family protein (AHRD V3.3 *** AT1G70590.1)
Sequence

MNQKTWPATKSSSDGLRRFTAFPFIRKQTHLQNRPSENPFSDHSKKINTTTPPSSSNSCC
SSSSSSNQYCYNQDFSQLPYDIILKIAARFSLSNVRASSLVCRSWCEALRPLRESMVFLR
WGKRFKHGRGGVKRNLSKALDSFLKGAARGSTLAMVDAGLLYWELGKREEGISLYRKAAE
LGDPAGQCNLGISLLQVNPMDPKEAVKWLYKASVSGHVRAQYQLALTLHKGHGPKRNLQE
TAKWYLRAAEGGYVRAMYNTALCYSVGEGLMQSHELSRKWMKRAADRGHSKAQLENGLSL
YSDGDRMQAVVYLELAARAGEAAAHPVKNVILQQMSTFSRDHAMLLVNSWRSLPSSH*

Transcript Sequence

Transcript ID

Solyc01g007930.3.1
Transcript Infomation

F-box family protein (AHRD V3.3 *** AT1G70590.1)
Sequence

TTTTTAAACAACATTAATTATAAATAAACGAAATTTAATATATACATAACTCGTCTAAAC
AAATTTCGAGTGCTCTGATTTTTCTCTCTTCCTTGCTCCTTCCTTCCACCGGCATGAATC
AGAAAACATGGCCGGCGACCAAGTCCAGTTCCGACGGCCTTCGTCGTTTCACCGCTTTCC
CTTTCATCAGAAAACAGACCCATCTTCAAAATCGTCCATCGGAAAACCCCTTTTCCGATC
ACTCCAAAAAGATCAATACAACAACTCCTCCATCATCATCAAATTCTTGTTGCAGTAGTA
GTAGTAGTAGTAATCAGTACTGCTACAATCAAGACTTTTCTCAGCTACCCTACGATATTA
TCTTGAAAATTGCTGCTAGGTTTTCGCTGTCGAATGTACGGGCATCTTCTCTAGTATGCA
GGTCTTGGTGCGAGGCACTTCGACCTTTAAGAGAATCTATGGTTTTTCTCAGATGGGGTA
AGAGATTTAAGCATGGAAGAGGTGGGGTTAAGCGTAATTTGAGTAAAGCCCTTGATTCTT
TCCTTAAAGGAGCTGCTCGTGGGTCTACACTAGCTATGGTGGATGCTGGGTTACTTTATT
GGGAGTTGGGGAAAAGAGAAGAAGGGATTAGTTTGTACAGAAAAGCTGCTGAGCTTGGTG
ACCCTGCTGGTCAGTGCAATTTGGGGATTTCTCTATTGCAAGTGAATCCTATGGACCCCA
AGGAAGCTGTTAAATGGCTTTATAAAGCTTCCGTTTCTGGTCATGTTCGTGCTCAATACC
AGCTTGCACTTACTTTACATAAAGGTCATGGTCCGAAGAGAAATCTCCAGGAAACGGCAA
AGTGGTACTTGAGGGCAGCAGAAGGTGGATATGTCCGCGCTATGTATAACACAGCATTAT
GCTACTCGGTTGGAGAAGGTTTAATGCAGTCTCATGAATTATCAAGAAAATGGATGAAGA
GAGCAGCTGATCGAGGTCATAGCAAAGCCCAGCTTGAGAATGGGTTGAGTCTGTATTCTG
ATGGGGATAGGATGCAAGCTGTGGTATATCTGGAACTTGCTGCTCGCGCTGGTGAAGCTG
CAGCTCATCCCGTGAAAAATGTTATACTTCAACAGATGTCGACTTTTTCTCGAGATCACG
CTATGCTTCTTGTCAATAGCTGGCGCTCTTTACCTTCATCGCACTGATATAACCCTATTA
TCGTCAACTTCATACAGTTCAATCAATGTATAACTTTGACTTCTTGAAGTAACAGAAATG
TAATATAAGATTTCATTTTCCCCTGCAAAAAAAAAAAGAGCAAATCTATAATGAAAACAA
GAACAAAACTTTCCAAATAAGTTTTATTAAAGAGTAGACTTTTTTCAATAGGAGCATATC
ATACAGAAATTAGCATTTTCTTCATAGGATACAAATAGAGAAAGAACACAACATAGAAAT
GAATGCAAATACTTGTTCAAATGAAATCAACCTGATGGCTGCAAATAGCGACAAACTCTA
AAAAAATTCGCAGCATTACTGGCAGTGACAATTTTAAGGAAAATTCAGAAAACAAAATAT
GTAGAGAAGACCTTGAAGACACAAGGAGTTCAAAACATCCGAAAAGAACCTTTTT