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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g007920.2.1
CDS Infomation

Isochorismatase hydrolase family protein (AHRD V3.3 *** G7IBE1_MEDTR)
Sequence

ATGGCTTCTTCATCATCATACAAAAAATTCGAGACGCGAAAACGAGATCCAGATCCAAAA
TCCGCTGTTCTATTGGTGATTGATATGCAGAACTACTTCTACTCCATGGGTAAACCGATT
CTACCAGCAATCAAAACCACAATCGATCTCTGCCGGCGGAATTCCGTGCCGGTGATATTC
ACGCGCCACTGTCATAAGTCACCGGACGATTACGGCATGATGTACGAGTGGTGGAACGGT
GATATTATCAGAGATGGAACCGTTGAAGCTGAACTTATACCGGAGTTAGATCGGAGAGAC
GGTGATTTGGTGGTCGAAAAACACACTTACAGTGCCTTCAGAGATACAAACTTAGAGGAG
AAACTGTTGGAAATGGGGATAAAGGAGGTAATAGTGACTGGAGTAATGACCAATGTGTGC
TGTGAGACCACAGCCAGAGAGGCATTTATTAGAGGGTTCAGAGTCTTCTTTTCCACAGAT
GCAACTGCAACTTCCTCAGCAGAACTGCATGATGCTACATTGAAGAACTTAGCTTATGGT
TTCACTTATTTGGTTGATTGCAAAAGGATTCAAGCTGCCTTTCTCAATTCCCCGAGCCCT
CAAGAGTTGAGGTAA

Peptide Sequence

PEP ID

Solyc01g007920.2.1
PEP Infomation

Isochorismatase hydrolase family protein (AHRD V3.3 *** G7IBE1_MEDTR)
Sequence

MASSSSYKKFETRKRDPDPKSAVLLVIDMQNYFYSMGKPILPAIKTTIDLCRRNSVPVIF
TRHCHKSPDDYGMMYEWWNGDIIRDGTVEAELIPELDRRDGDLVVEKHTYSAFRDTNLEE
KLLEMGIKEVIVTGVMTNVCCETTAREAFIRGFRVFFSTDATATSSAELHDATLKNLAYG
FTYLVDCKRIQAAFLNSPSPQELR*

Transcript Sequence

Transcript ID

Solyc01g007920.2.1
Transcript Infomation

Isochorismatase hydrolase family protein (AHRD V3.3 *** G7IBE1_MEDTR)
Sequence

TATCCACTGATTCAATGACATCGTATGGATAAATAAGATTGCATTTTTGAACTATAGAAA
CACGATAACAAAGGATATTGCATATCGATAGTTAGTCGATAGTTTAGGTATAATTGCCTT
TTTGTTTGTTCCTTGTAGAAGGCAGTGGAAACTAGAAAGTGGATAAAACTCACTTCCCCT
GTTTTAGAGCACCAAAATTCTCTTTAACAATGGCTTCTTCATCATCATACAAAAAATTCG
AGACGCGAAAACGAGATCCAGATCCAAAATCCGCTGTTCTATTGGTGATTGATATGCAGA
ACTACTTCTACTCCATGGGTAAACCGATTCTACCAGCAATCAAAACCACAATCGATCTCT
GCCGGCGGAATTCCGTGCCGGTGATATTCACGCGCCACTGTCATAAGTCACCGGACGATT
ACGGCATGATGTACGAGTGGTGGAACGGTGATATTATCAGAGATGGAACCGTTGAAGCTG
AACTTATACCGGAGTTAGATCGGAGAGACGGTGATTTGGTGGTCGAAAAACACACTTACA
GTGCCTTCAGAGATACAAACTTAGAGGAGAAACTGTTGGAAATGGGGATAAAGGAGGTAA
TAGTGACTGGAGTAATGACCAATGTGTGCTGTGAGACCACAGCCAGAGAGGCATTTATTA
GAGGGTTCAGAGTCTTCTTTTCCACAGATGCAACTGCAACTTCCTCAGCAGAACTGCATG
ATGCTACATTGAAGAACTTAGCTTATGGTTTCACTTATTTGGTTGATTGCAAAAGGATTC
AAGCTGCCTTTCTCAATTCCCCGAGCCCTCAAGAGTTGAGGTAATATTGTAGCGACGGAT
GAACTATGGAGAAATACTGTAGTGAGTAAATATTTGAGAATAAGCATATAGATGTAAGAT
AAAATGAATACATGACAAGATGTACCTTCTCATGTCAAAGGTGAGTACTTATCTGTATCG
AGTGTTTATATCGAAATAAAGATATGTTTACGATACGTAAATCTCATATATGTCTATAGG
ATGGTTTTATATACATTATTTTCCACATTATATGTTTTGGAAATTCAATTATTTTCACTA
TATTTCTATAGGCTGATTTTATGTAAATTATTTTCCATAAAATATGTTTTGGAAAGTTTG
TCGAA