Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g007770.2.1
CDS Infomation

LOW QUALITY:COPII coat assembly protein SEC16, putative (AHRD V3.3 *** A0A061EUC6_THECC)
Sequence

ATGGCCGTCGTTGAGCCAACCGCCGCCGCACCGGAAAATCCTCTCCTCCGTCGTCGCAAC
TCCGTTACGCTACCTACAAAGCTCAGTTTACCTCTTCAATCATCAGCATCAACTACTACA
GCTACCGTCACGTCATCGGCTTCGTCTTCGATGACGAATTCGGTAAGCGATGATTTTGAG
CTTTTCTCAATTAAACCTGTATCGTATACTTCTCTAAGAGATCTATTACCGCCGGCAACT
GTTAATTCTCCCCGGCCTATGGCTACGGCTAGTAACGGCCAATCAGGTTCCGAGATTTCA
ATACGGAATCGACTTGTGAAGCAAGCCGCTTGGGCTTATCTTCAGCCGATGTCGACTTCG
CCGGATTCATCCGGACGGAGCTTATTTAGCCGTCTCTGGTTCCGATTTCCGGTTAACAAT
CCCGTTGCCGGAGTAATCGAATTCGTTGATCGGTGCATTTTTGCTCCTTTGAGTAGAGCT
GTTGATTGGATACTTCGTGCTATTCGGATCCGGAGCTCCAGATAA

Peptide Sequence

PEP ID

Solyc01g007770.2.1
PEP Infomation

LOW QUALITY:COPII coat assembly protein SEC16, putative (AHRD V3.3 *** A0A061EUC6_THECC)
Sequence

MAVVEPTAAAPENPLLRRRNSVTLPTKLSLPLQSSASTTTATVTSSASSSMTNSVSDDFE
LFSIKPVSYTSLRDLLPPATVNSPRPMATASNGQSGSEISIRNRLVKQAAWAYLQPMSTS
PDSSGRSLFSRLWFRFPVNNPVAGVIEFVDRCIFAPLSRAVDWILRAIRIRSSR*

Transcript Sequence

Transcript ID

Solyc01g007770.2.1
Transcript Infomation

LOW QUALITY:COPII coat assembly protein SEC16, putative (AHRD V3.3 *** A0A061EUC6_THECC)
Sequence

CGCCTCCCTTATTGACTACTGTCTCTCTCTTTCTCTCTCTAGAACTTTCTCTCACTACCC
TCAGCTATGGCCGTCGTTGAGCCAACCGCCGCCGCACCGGAAAATCCTCTCCTCCGTCGT
CGCAACTCCGTTACGCTACCTACAAAGCTCAGTTTACCTCTTCAATCATCAGCATCAACT
ACTACAGCTACCGTCACGTCATCGGCTTCGTCTTCGATGACGAATTCGGTAAGCGATGAT
TTTGAGCTTTTCTCAATTAAACCTGTATCGTATACTTCTCTAAGAGATCTATTACCGCCG
GCAACTGTTAATTCTCCCCGGCCTATGGCTACGGCTAGTAACGGCCAATCAGGTTCCGAG
ATTTCAATACGGAATCGACTTGTGAAGCAAGCCGCTTGGGCTTATCTTCAGCCGATGTCG
ACTTCGCCGGATTCATCCGGACGGAGCTTATTTAGCCGTCTCTGGTTCCGATTTCCGGTT
AACAATCCCGTTGCCGGAGTAATCGAATTCGTTGATCGGTGCATTTTTGCTCCTTTGAGT
AGAGCTGTTGATTGGATACTTCGTGCTATTCGGATCCGGAGCTCCAGATAACAACAAATA
CAAATAATCCGAACATATACTTCGATTAAAAAAAAAATTAGCATCATAAATGTACAACGA
ACGAATTTCATTTTTCTATATGTATAAACCATAAGAAAAAGGAAAAAAATTCAATAAAAA
AATACTT