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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g007200.2.1
CDS Infomation

LOW QUALITY:Integrase-type DNA-binding superfamily protein (AHRD V3.3 -** AT1G72360.3)
Sequence

ATGGAGAATTCTTCTTCGGAAAATCTTGACGATGGAGAGTTATGGCTACCTTCTGATATT
TTTCCAGTAGAAGAAACTGTTTCTTCTGCTAATAATAAGCTCAAAAACAACAACCCCATT
GCTTCTTCTCTTTGCTGTTGTTACTCTTGTGTTCTTCTTCTTCGTCATCCTCATAACTCC
ATTTTCATGGCTGAACAACAAGTTCTACAGAGTGTTCCAAAGCCATTTCCCATAACTGAG
CGGCGGTTCAGACCGGCTGAGAGGTGTTGCACCTGTACAGATTGTTCAATTTCAGACTAT
TTTGAACGGAGTAGAAGAGAAACAACCGGTCCACCACCGGTTTATCCACCGGTTCAACTT
CACCACCAGGTTGAGAGTTTGATGGAAGTTAGAGCTCCATTTTTACAGAAGGAAGAACAG
AGCCGGTTCATCGGGATTCAGAGAAGAAACCTCGGCCTGAACCGGTTCGCCGGTAACTGG
GTTTCGCCGTTTGTGGGTTTCGGTGGCAATGGCTGTGGTTTTAATGGTGAAAGTAGTTCT
GTGAGAGATTATGGTGGAACTGGTGTCTTCCTCCCTAGAATACCTAGCAACATCAACAAC
AATGGTGGAAAGAAACAAGGTGGTAGAAATAGGCAAGATGTTCAACAAACTGATCAAAGA
TATCCATGCATATGA

Peptide Sequence

PEP ID

Solyc01g007200.2.1
PEP Infomation

LOW QUALITY:Integrase-type DNA-binding superfamily protein (AHRD V3.3 -** AT1G72360.3)
Sequence

MENSSSENLDDGELWLPSDIFPVEETVSSANNKLKNNNPIASSLCCCYSCVLLLRHPHNS
IFMAEQQVLQSVPKPFPITERRFRPAERCCTCTDCSISDYFERSRRETTGPPPVYPPVQL
HHQVESLMEVRAPFLQKEEQSRFIGIQRRNLGLNRFAGNWVSPFVGFGGNGCGFNGESSS
VRDYGGTGVFLPRIPSNINNNGGKKQGGRNRQDVQQTDQRYPCI*

Transcript Sequence

Transcript ID

Solyc01g007200.2.1
Transcript Infomation

LOW QUALITY:Integrase-type DNA-binding superfamily protein (AHRD V3.3 -** AT1G72360.3)
Sequence

CTGTAACGTCAATTTTCTCTCTCTTTTCTCTCTCTCTAAAAGCTTATAATATGAGTTTCT
GAGTTGGAATACTTGGTGGGTTTTGAGGGAAAATGGAGAATTCTTCTTCGGAAAATCTTG
ACGATGGAGAGTTATGGCTACCTTCTGATATTTTTCCAGTAGAAGAAACTGTTTCTTCTG
CTAATAATAAGCTCAAAAACAACAACCCCATTGCTTCTTCTCTTTGCTGTTGTTACTCTT
GTGTTCTTCTTCTTCGTCATCCTCATAACTCCATTTTCATGGCTGAACAACAAGTTCTAC
AGAGTGTTCCAAAGCCATTTCCCATAACTGAGCGGCGGTTCAGACCGGCTGAGAGGTGTT
GCACCTGTACAGATTGTTCAATTTCAGACTATTTTGAACGGAGTAGAAGAGAAACAACCG
GTCCACCACCGGTTTATCCACCGGTTCAACTTCACCACCAGGTTGAGAGTTTGATGGAAG
TTAGAGCTCCATTTTTACAGAAGGAAGAACAGAGCCGGTTCATCGGGATTCAGAGAAGAA
ACCTCGGCCTGAACCGGTTCGCCGGTAACTGGGTTTCGCCGTTTGTGGGTTTCGGTGGCA
ATGGCTGTGGTTTTAATGGTGAAAGTAGTTCTGTGAGAGATTATGGTGGAACTGGTGTCT
TCCTCCCTAGAATACCTAGCAACATCAACAACAATGGTGGAAAGAAACAAGGTGGTAGAA
ATAGGCAAGATGTTCAACAAACTGATCAAAGATATCCATGCATATGAGAAATGGCAAAAA
CCTAAAGAATTGGACCTAATGGATATATAGTAATTTGGTCATTAGATATAGTAATTTGGT
AGATTTAAATAATTGAACTTAGCATATGGGTTATGTGTGTAATTTTTATCTAATTGTCAA
TTGCCTTTTTGAGGGAAAATGGTGATATATTTTGGCAAAAAGGCCTATTTTTAAATCTCT
CCCCTTGTTGGTGTCTAAATGTGACAATTGTGATGTGACTCCTCTTTAAATATGTGTATT
ATAATAAATGCTTCTAGTTATGGCCACATATGCCATTTTGTA