Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g007060.3.1
CDS Infomation

BTB/POZ domain-containing protein (AHRD V3.3 *** AT3G05675.3)
Sequence

ATGGAGACAGTCCCTAATGAATTGAAGACATCAAGCAAGATTGGAGATAGACCAACGAGT
GATGTTGTCGTAAGACTTAGAACACAGGATGGCCGTGATGATTGGCTTTACTGTCATTCA
CATATTCTCATTGAAGAGAGTAAATATTTTGCTGATCGGTTATCAGATAGTTGGCCGACA
TGTCAGTTTCTGGATTCACGCAATTGTGTTGAGGTTTACTGTGAAGAACCTGATCTGGAC
TCCCATGTCAATGTCCTTCGACTCTTTTATGTCATTGCGGATAGCTTAATGATGGAAATT
TGCCATGGTGTCAAGAATGCACTTGGCATTTTGCGAATTGCTGTCAAACTTGGATGCCCA
AGAATTACTGCAGTATGTGTGGATTATTTGGAAGCAGTCCCTTGGGAGGAAGCTGAAGAG
GAAGAGATATTAAATACTATACCAAGCATGGGATCTAAGGTGGAACCGGTACTTGCTCGC
CTCCAACCAGTCAATCCTACTGCCGTAATGAAGATTTTTCTTGCAGCCCTTCAATTTGCT
ACGTCATCACCTCCTTCACCTTTGAATGATCTGAAAAACACTGCTCAAGAACAGCTTGAA
TACATGCTTACCGAGGACGATGATGCTCCTTTACTGACCGCTGATGAAGAAATAAAGCTA
GAAGTCATGCGATGTGTCAAGAAGCTGCTTGATAGATTTAACAGCATTGTAGAGTCTCTA
TTATGTGACCTCCAAGAATCGATTTCAGATGCTGGGAGAATGCAATCGTTGCATTCTTGT
TTAACAGATTTGTTATGGGCATGTCAGATATTAGGGAAGCTGGAGATTATCAGAGATTTT
GTTTGCAGCTGGACGGAGTTGTCAGTGAAGCTAGTAACCATCGTTCAACAAAAAGATGAA
GAAAATCAAATTCTGAAGACAAAGCTGAAGGTTCTTGAGGTGACCGCAAAAGTGTTAGAG
GCAATAGGCTATGGCATAGTTGTGTTACCTACAGTAAAACGACTTCACATGGTGAAGCTC
TGGCTTCCTTTTGTCCGGACAATGAAGCCTTTAGTCGATTCCGTCACCGAGGAAACTGAG
GATGAGATCACACTAAAAGTCGATAGTGAGATATGGCAATCTTTGGAGTCAGCATTTGTT
GCTATTATACTTACATTGCCGTCAGTTGATCAGACAGACATTTTAACAGAGTGGTTGGAA
AATCAACAGATTCGATATCCAGACCTCACCGAGGCATTTGAAGTATGGTGTTACAGGTCC
AAGGTAGCTAAGCGAAGGCTGGCAACACTTGGGGAAGAGCACAATACAGCTAAAGCAGTA
TGA

Peptide Sequence

PEP ID

Solyc01g007060.3.1
PEP Infomation

BTB/POZ domain-containing protein (AHRD V3.3 *** AT3G05675.3)
Sequence

METVPNELKTSSKIGDRPTSDVVVRLRTQDGRDDWLYCHSHILIEESKYFADRLSDSWPT
CQFLDSRNCVEVYCEEPDLDSHVNVLRLFYVIADSLMMEICHGVKNALGILRIAVKLGCP
RITAVCVDYLEAVPWEEAEEEEILNTIPSMGSKVEPVLARLQPVNPTAVMKIFLAALQFA
TSSPPSPLNDLKNTAQEQLEYMLTEDDDAPLLTADEEIKLEVMRCVKKLLDRFNSIVESL
LCDLQESISDAGRMQSLHSCLTDLLWACQILGKLEIIRDFVCSWTELSVKLVTIVQQKDE
ENQILKTKLKVLEVTAKVLEAIGYGIVVLPTVKRLHMVKLWLPFVRTMKPLVDSVTEETE
DEITLKVDSEIWQSLESAFVAIILTLPSVDQTDILTEWLENQQIRYPDLTEAFEVWCYRS
KVAKRRLATLGEEHNTAKAV*

Transcript Sequence

Transcript ID

Solyc01g007060.3.1
Transcript Infomation

BTB/POZ domain-containing protein (AHRD V3.3 *** AT3G05675.3)
Sequence

AGTTTTGCCCTCGGGTTTGTTAACGAGCACTTTATCCCAATATGAAATTTGTCGATATGA
ATTCAAATCAAGTCAGACTCTAATAATTTGATGATCGAACCTCGAATGAAAAAAAAATAA
AAATCCCAACTTGTGCCCAAAAAAATAATTAAAAAATCAACCATCATCATAGTTTATCCT
TCCAAAAAAAAAAAAAAAAAGGTGAACTCAACTATTTGATTTCCCAAATTTCTAATCTTT
AAACAGTTTCAAGAATCAAATGCCCAAATCCCCCAAATTTGTACTTTTTACTTCAACAAT
TTGAAGAACAAACAACTCTAAATCTACTTGAAAATGAGTAAAAAAGGTATCTATTGGAAG
ATTTTGGTGTGTGTTGGTTGAGTGAAGGGAAGTAGACAAAAAGGGAGCTTTTTGATTATC
TTGTAAATGGGGTTCTTGAGTAGAAGGAGAATGTGGGTCATTTTGGATAGAGGGTTAGCG
GTCGGGCATATACACCAGAAGATCCATTTTATGACCGAGCAAATCTAGGAACTTGTGGTA
GAGGTGGCCCTTCAAAAGGTCTGACAATGCATCGAAGCTACACCAACTAGTCTTGAGCAT
TAATGGAGACAGTCCCTAATGAATTGAAGACATCAAGCAAGATTGGAGATAGACCAACGA
GTGATGTTGTCGTAAGACTTAGAACACAGGATGGCCGTGATGATTGGCTTTACTGTCATT
CACATATTCTCATTGAAGAGAGTAAATATTTTGCTGATCGGTTATCAGATAGTTGGCCGA
CATGTCAGTTTCTGGATTCACGCAATTGTGTTGAGGTTTACTGTGAAGAACCTGATCTGG
ACTCCCATGTCAATGTCCTTCGACTCTTTTATGTCATTGCGGATAGCTTAATGATGGAAA
TTTGCCATGGTGTCAAGAATGCACTTGGCATTTTGCGAATTGCTGTCAAACTTGGATGCC
CAAGAATTACTGCAGTATGTGTGGATTATTTGGAAGCAGTCCCTTGGGAGGAAGCTGAAG
AGGAAGAGATATTAAATACTATACCAAGCATGGGATCTAAGGTGGAACCGGTACTTGCTC
GCCTCCAACCAGTCAATCCTACTGCCGTAATGAAGATTTTTCTTGCAGCCCTTCAATTTG
CTACGTCATCACCTCCTTCACCTTTGAATGATCTGAAAAACACTGCTCAAGAACAGCTTG
AATACATGCTTACCGAGGACGATGATGCTCCTTTACTGACCGCTGATGAAGAAATAAAGC
TAGAAGTCATGCGATGTGTCAAGAAGCTGCTTGATAGATTTAACAGCATTGTAGAGTCTC
TATTATGTGACCTCCAAGAATCGATTTCAGATGCTGGGAGAATGCAATCGTTGCATTCTT
GTTTAACAGATTTGTTATGGGCATGTCAGATATTAGGGAAGCTGGAGATTATCAGAGATT
TTGTTTGCAGCTGGACGGAGTTGTCAGTGAAGCTAGTAACCATCGTTCAACAAAAAGATG
AAGAAAATCAAATTCTGAAGACAAAGCTGAAGGTTCTTGAGGTGACCGCAAAAGTGTTAG
AGGCAATAGGCTATGGCATAGTTGTGTTACCTACAGTAAAACGACTTCACATGGTGAAGC
TCTGGCTTCCTTTTGTCCGGACAATGAAGCCTTTAGTCGATTCCGTCACCGAGGAAACTG
AGGATGAGATCACACTAAAAGTCGATAGTGAGATATGGCAATCTTTGGAGTCAGCATTTG
TTGCTATTATACTTACATTGCCGTCAGTTGATCAGACAGACATTTTAACAGAGTGGTTGG
AAAATCAACAGATTCGATATCCAGACCTCACCGAGGCATTTGAAGTATGGTGTTACAGGT
CCAAGGTAGCTAAGCGAAGGCTGGCAACACTTGGGGAAGAGCACAATACAGCTAAAGCAG
TATGACTTCTCTCTTCTTTTGCCAATTCTAGGATTTAGCTATCCTCCTTTTCGCGTCACT
GATTATATGCTGAAAACTTTCTTTTATTCTTTCGAGTTATAACCTAGCTGAATTGGTAAG
ACATCTTAAAATGGCCTAGCTTCTGTAAAGTGACCTCTATTTTTGTACCCTCTCCATGTT
TTCATGCTTATTCCTTATGAAGTATATCAATCATTTTCAGCAATATACTCGGAACTCGAA
AAAACTGGAATCTTTGCCTTGAAACTGTATGCCAAGTGATGATTGATGATAACTTATGTT
CTTACATTTGAAA