Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g006850.1.1
CDS Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H9M3_POPTR)
Sequence	ATGTTTCAAAGTAGAATGATTTTGAAGAATCTATGGAAACAAAAGCTTCAAAATTCTCAA AATAATCTGTTGAATTCAAGATTCAAGATTTGTTCTTCTTCTTCGATTTCCACAAAATCA TCTAAGCTTAGCAAAATCAAGAAAAGTGAAAACCCGAATTCGAAAAACAAGAATCAACCC CAGAATTTCACTTCACTCTTCAATGAAATCAGAGAGATTTTAGGAACAGAGAGTGTAATG CCATATGAATCCGCAAATTTGAACGATACCCAGTTCGTAAATTTATCGTCCTGCCATGAA AGTGTTCGAGAAAATGCCAAGCAGAGTACAGAGCTGGAGGATTCAGTATCTTGCACAGAA CTTGTTTGTGAAAATGCCAAGCTGAGTACAGAGCTGGAGGATTCATCGTCTTGCACGGAA CGTGTTCGTGGAAATGCTGAGATGAGGATAGAGCTGAAGGATTCATCATGTGCTTGTGGA GATGTGAAGCAGAGTGTAGAGCTGGAAATGATGAATTTACATGAAGATACTCGGGTTGAG GATTTGGTGAAAAGGGATGTTAGTCCTATTGTTCACAAGATTACGGGGATTTTGAGGAGT GAATGTGATGTGATCGCGATGGAGGAACAGTTGGAAAGTGCAGGTTTTGAGTATAACGAG GATGTCGTTGAGAAGGTTTTGAAGAGGTGTTTTAAAGTTCCTCATTTAGCTTTGAGGTTT TTCGATTGGTTGAAAACAAGAGAAGGGTTTAGTCATACTACGGAGACTTATAACACGATG ATTTACATGGCTGCGGACTGTAAGGAGTTCCGTTTGGTTGATGAATTGGTGGAAGAAATG GAGAGGAGTTCTTGTCGGAAAAACCTTAAGACGTGGAGCATTTTGCTATCGCATTATGGG AATGGTAAGTTGATTGGCAAAGCGTTGTCATTGTTTGAACAGTTGAAGAAGTTAGGTTAT GAGCCCGATTTAAGGGCTTATACGATCATGTTGAGTTCACTTTGTAATGCTGGAAAAGCG GACATAGCTTTGGAGTACTTCAACGAAATGATCCACAAAGGCTTGATGTTGGATGAAGCT ACGTCTGGACAGTTACTCAAATGCTTGGCTAACTCCGGAAATATTGCTGCAGTTCACAAA GTTGGTGACGACATGATAAGGGTTTGTAGTATTCCAGAAAACCACGTCTACAGGCTTATG CTTAAGAGTTTCTGCATCACGGGGAGGATTACAGAAGCTTTGGAATTGATTCGTGATCTG AAAAGTAAAAACATGAACCTTGACTCTGAAATTTTTACGACATTAGTGAAAGGACTGTGC AAGGCTGAGAGGATCAATGATGCATTGGAGATTGTTGAAATTTTGAAGAAAAGAAACGGT GCTGATGAGAAGGTTTATGCAGTCCTTATAAGTGCATACTTGAGGAGAAATGAAATTTCA AAGGCACTTAATCTGTTTCAGAGCATGAAAGATTCGGGAAGTTTGCTCAACGTTTCGACT TATACCAATCTGATGCAGCGCCTTTTCAGGGTTAAAGAGTTTCAAGAAGCGTTGAACCTC TATAATGAGATGACAGAGATGGGAGTTAAATTGGATGCTGTTGCAGCAACTGCTGTAGTT GCCGGTTATATCATCCAAAACCGTATTTCTGAAATGTGGCAAGTGTTTGAGAATATGAAG GATAAAGGAATTGTCTTTACTCGGAAATCGTACCTCATATTTGTCAAGGAACTTACCAAG GTGTCAGGGACAACAGATATTTTCAAGGTTCTGAATGAAATGAAGGCCTCTAAGATGTGT ATTGGAAACGATATCTTCCAGTATGTTATTTCGTATCTGGAGAGAAAAGGAGATATGAAG AACATCAACAGGATGAAGCTGCTACAGGGGGGTTGTAAAGTTCACAATCACGAAAATGGA ACATGTGATGTGAGCAGTCAACGAGAACGATACTTGGAGTCGAATTATGAAAACCTAGAA CAAGTGTCCTCAGCTCATGACATGCCAGAGGCAACTTCAAAATCCTCTATTGAATGTGAT GTACGTGAGATTTGCCAAATTTTGATTTCATCGAGGGATTGGTACTTAATACAAGAACAA TTGGAGAACTGCAACATACAGTTCACCCCAGAAATCGTCATGGAAGTTTTGCGTAATTTC AAGCTGCAAGGTCGGTTAGCATTGCAATTTTTCTCTTGGGTTGAGAAGCAAAGTAGTTAC AGACATACAACGGAATCCTACAACACGGCTATTAAAATAGCAGGACAGGGCAAGGACTTC ACTCAGATGAGAAATCTATTCTCCGATATGAGGAGAAATGGTTGTTTAGTAACAGCTCAT ACCTGGACAATCATGATAATGCTGTATGGGAGAACAGGACTAACCGATATTGCTGTTCGT ACTTTTAAAGAAATGAAACACAGCGGTTGTAAACCGACAGAAAGTACCTACAAAGCTCTG ATTACATCTCTTTGTCAGAAAAAAGGTAGGAGAATTGATGAAGCAGTAAAAATATTCCAG GAGATGATTCAAGTTGGATACAGTCCTGATAAAGAACTAATCGAAGATTATCTTGGTTGT TTATGTGAACTTGGTAAACTAAGGGATGCCAGAAGCTGTACCGAATCTTTACTAAAGCTC GGTTTCAGTACCCCTTTAGCATACTCATTGTACATTAGATCACTTTGTCGAGCATGGAGG CTGGAAGAGGCTTTAGCATTGATCAACGAAGTTGATGACGAGCAACACGTCTTGAGCCAG TACGTCTACGGAAGTTTAGTCCACGGACTACTACAAAAAGGGAACTTAGAAGAAGCATTA GCAAGAATCGAATCCATGAAGCAGACCGGCATTCATCCAACAGTCCATGTATATACTTCC TTGATTGGCTACTTCTTCAAAGTGAAACAGGTTAGTAAGGCTCTTCAAACTTTCAAAGAA ATGAAAGATTCAGGCTGTCAACCAACTATAGTTACCTACTCAGCGTTGATACGAGGGTAT ATGAACGTGGGAAAAGTTTCCGAGGCTCGGGATGTGTTTCATCAGATGAAAAAGAATGGA CCATATCCTGATTTCAATGCATACTCCATGTTCATCTCTTGTCTATGTAGAATTGGTAAT TCTGAAGAAGCTCTTCAACTTATATCTGAGATGTTGAATATTGGGATTATTCCAAGTACA GTTAATTATAGAACTGTCTTCTATGGGCTCAATAGAGAAGGTAAACAAGATTTAGCAAAG ACTGTATTACATATGAAGTTAGATGTAAAAAGGAGGAGAAAGTTTCTAACTTGA

Peptide Sequence

PEP ID	Solyc01g006850.1.1
PEP Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H9M3_POPTR)
Sequence	MFQSRMILKNLWKQKLQNSQNNLLNSRFKICSSSSISTKSSKLSKIKKSENPNSKNKNQP QNFTSLFNEIREILGTESVMPYESANLNDTQFVNLSSCHESVRENAKQSTELEDSVSCTE LVCENAKLSTELEDSSSCTERVRGNAEMRIELKDSSCACGDVKQSVELEMMNLHEDTRVE DLVKRDVSPIVHKITGILRSECDVIAMEEQLESAGFEYNEDVVEKVLKRCFKVPHLALRF FDWLKTREGFSHTTETYNTMIYMAADCKEFRLVDELVEEMERSSCRKNLKTWSILLSHYG NGKLIGKALSLFEQLKKLGYEPDLRAYTIMLSSLCNAGKADIALEYFNEMIHKGLMLDEA TSGQLLKCLANSGNIAAVHKVGDDMIRVCSIPENHVYRLMLKSFCITGRITEALELIRDL KSKNMNLDSEIFTTLVKGLCKAERINDALEIVEILKKRNGADEKVYAVLISAYLRRNEIS KALNLFQSMKDSGSLLNVSTYTNLMQRLFRVKEFQEALNLYNEMTEMGVKLDAVAATAVV AGYIIQNRISEMWQVFENMKDKGIVFTRKSYLIFVKELTKVSGTTDIFKVLNEMKASKMC IGNDIFQYVISYLERKGDMKNINRMKLLQGGCKVHNHENGTCDVSSQRERYLESNYENLE QVSSAHDMPEATSKSSIECDVREICQILISSRDWYLIQEQLENCNIQFTPEIVMEVLRNF KLQGRLALQFFSWVEKQSSYRHTTESYNTAIKIAGQGKDFTQMRNLFSDMRRNGCLVTAH TWTIMIMLYGRTGLTDIAVRTFKEMKHSGCKPTESTYKALITSLCQKKGRRIDEAVKIFQ EMIQVGYSPDKELIEDYLGCLCELGKLRDARSCTESLLKLGFSTPLAYSLYIRSLCRAWR LEEALALINEVDDEQHVLSQYVYGSLVHGLLQKGNLEEALARIESMKQTGIHPTVHVYTS LIGYFFKVKQVSKALQTFKEMKDSGCQPTIVTYSALIRGYMNVGKVSEARDVFHQMKKNG PYPDFNAYSMFISCLCRIGNSEEALQLISEMLNIGIIPSTVNYRTVFYGLNREGKQDLAK TVLHMKLDVKRRRKFLT*

Transcript Sequence

Transcript ID	Solyc01g006850.1.1
Transcript Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H9M3_POPTR)
Sequence	ATGTTTCAAAGTAGAATGATTTTGAAGAATCTATGGAAACAAAAGCTTCAAAATTCTCAA AATAATCTGTTGAATTCAAGATTCAAGATTTGTTCTTCTTCTTCGATTTCCACAAAATCA TCTAAGCTTAGCAAAATCAAGAAAAGTGAAAACCCGAATTCGAAAAACAAGAATCAACCC CAGAATTTCACTTCACTCTTCAATGAAATCAGAGAGATTTTAGGAACAGAGAGTGTAATG CCATATGAATCCGCAAATTTGAACGATACCCAGTTCGTAAATTTATCGTCCTGCCATGAA AGTGTTCGAGAAAATGCCAAGCAGAGTACAGAGCTGGAGGATTCAGTATCTTGCACAGAA CTTGTTTGTGAAAATGCCAAGCTGAGTACAGAGCTGGAGGATTCATCGTCTTGCACGGAA CGTGTTCGTGGAAATGCTGAGATGAGGATAGAGCTGAAGGATTCATCATGTGCTTGTGGA GATGTGAAGCAGAGTGTAGAGCTGGAAATGATGAATTTACATGAAGATACTCGGGTTGAG GATTTGGTGAAAAGGGATGTTAGTCCTATTGTTCACAAGATTACGGGGATTTTGAGGAGT GAATGTGATGTGATCGCGATGGAGGAACAGTTGGAAAGTGCAGGTTTTGAGTATAACGAG GATGTCGTTGAGAAGGTTTTGAAGAGGTGTTTTAAAGTTCCTCATTTAGCTTTGAGGTTT TTCGATTGGTTGAAAACAAGAGAAGGGTTTAGTCATACTACGGAGACTTATAACACGATG ATTTACATGGCTGCGGACTGTAAGGAGTTCCGTTTGGTTGATGAATTGGTGGAAGAAATG GAGAGGAGTTCTTGTCGGAAAAACCTTAAGACGTGGAGCATTTTGCTATCGCATTATGGG AATGGTAAGTTGATTGGCAAAGCGTTGTCATTGTTTGAACAGTTGAAGAAGTTAGGTTAT GAGCCCGATTTAAGGGCTTATACGATCATGTTGAGTTCACTTTGTAATGCTGGAAAAGCG GACATAGCTTTGGAGTACTTCAACGAAATGATCCACAAAGGCTTGATGTTGGATGAAGCT ACGTCTGGACAGTTACTCAAATGCTTGGCTAACTCCGGAAATATTGCTGCAGTTCACAAA GTTGGTGACGACATGATAAGGGTTTGTAGTATTCCAGAAAACCACGTCTACAGGCTTATG CTTAAGAGTTTCTGCATCACGGGGAGGATTACAGAAGCTTTGGAATTGATTCGTGATCTG AAAAGTAAAAACATGAACCTTGACTCTGAAATTTTTACGACATTAGTGAAAGGACTGTGC AAGGCTGAGAGGATCAATGATGCATTGGAGATTGTTGAAATTTTGAAGAAAAGAAACGGT GCTGATGAGAAGGTTTATGCAGTCCTTATAAGTGCATACTTGAGGAGAAATGAAATTTCA AAGGCACTTAATCTGTTTCAGAGCATGAAAGATTCGGGAAGTTTGCTCAACGTTTCGACT TATACCAATCTGATGCAGCGCCTTTTCAGGGTTAAAGAGTTTCAAGAAGCGTTGAACCTC TATAATGAGATGACAGAGATGGGAGTTAAATTGGATGCTGTTGCAGCAACTGCTGTAGTT GCCGGTTATATCATCCAAAACCGTATTTCTGAAATGTGGCAAGTGTTTGAGAATATGAAG GATAAAGGAATTGTCTTTACTCGGAAATCGTACCTCATATTTGTCAAGGAACTTACCAAG GTGTCAGGGACAACAGATATTTTCAAGGTTCTGAATGAAATGAAGGCCTCTAAGATGTGT ATTGGAAACGATATCTTCCAGTATGTTATTTCGTATCTGGAGAGAAAAGGAGATATGAAG AACATCAACAGGATGAAGCTGCTACAGGGGGGTTGTAAAGTTCACAATCACGAAAATGGA ACATGTGATGTGAGCAGTCAACGAGAACGATACTTGGAGTCGAATTATGAAAACCTAGAA CAAGTGTCCTCAGCTCATGACATGCCAGAGGCAACTTCAAAATCCTCTATTGAATGTGAT GTACGTGAGATTTGCCAAATTTTGATTTCATCGAGGGATTGGTACTTAATACAAGAACAA TTGGAGAACTGCAACATACAGTTCACCCCAGAAATCGTCATGGAAGTTTTGCGTAATTTC AAGCTGCAAGGTCGGTTAGCATTGCAATTTTTCTCTTGGGTTGAGAAGCAAAGTAGTTAC AGACATACAACGGAATCCTACAACACGGCTATTAAAATAGCAGGACAGGGCAAGGACTTC ACTCAGATGAGAAATCTATTCTCCGATATGAGGAGAAATGGTTGTTTAGTAACAGCTCAT ACCTGGACAATCATGATAATGCTGTATGGGAGAACAGGACTAACCGATATTGCTGTTCGT ACTTTTAAAGAAATGAAACACAGCGGTTGTAAACCGACAGAAAGTACCTACAAAGCTCTG ATTACATCTCTTTGTCAGAAAAAAGGTAGGAGAATTGATGAAGCAGTAAAAATATTCCAG GAGATGATTCAAGTTGGATACAGTCCTGATAAAGAACTAATCGAAGATTATCTTGGTTGT TTATGTGAACTTGGTAAACTAAGGGATGCCAGAAGCTGTACCGAATCTTTACTAAAGCTC GGTTTCAGTACCCCTTTAGCATACTCATTGTACATTAGATCACTTTGTCGAGCATGGAGG CTGGAAGAGGCTTTAGCATTGATCAACGAAGTTGATGACGAGCAACACGTCTTGAGCCAG TACGTCTACGGAAGTTTAGTCCACGGACTACTACAAAAAGGGAACTTAGAAGAAGCATTA GCAAGAATCGAATCCATGAAGCAGACCGGCATTCATCCAACAGTCCATGTATATACTTCC TTGATTGGCTACTTCTTCAAAGTGAAACAGGTTAGTAAGGCTCTTCAAACTTTCAAAGAA ATGAAAGATTCAGGCTGTCAACCAACTATAGTTACCTACTCAGCGTTGATACGAGGGTAT ATGAACGTGGGAAAAGTTTCCGAGGCTCGGGATGTGTTTCATCAGATGAAAAAGAATGGA CCATATCCTGATTTCAATGCATACTCCATGTTCATCTCTTGTCTATGTAGAATTGGTAAT TCTGAAGAAGCTCTTCAACTTATATCTGAGATGTTGAATATTGGGATTATTCCAAGTACA GTTAATTATAGAACTGTCTTCTATGGGCTCAATAGAGAAGGTAAACAAGATTTAGCAAAG ACTGTATTACATATGAAGTTAGATGTAAAAAGGAGGAGAAAGTTTCTAACTTGA