Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g006620.3.1
CDS Infomation	C2 calcium/lipid-binding and GRAM domain protein (AHRD V3.3 *** A0A072ULK6_MEDTR)
Sequence	ATGCAGAAAGGTTCAATACATGAAGAGTTTGCTTTAAAGCAAACAGCTCCGAAAATTGTT GGATCAGGGGTGATGATAGGAGGAGATAAGGTAACCGTCGCCTATGACCTCGTTGAGCAA ATGGAATATCTCTATGTTCGCGTTGTCAAGGCTAAAGAGTTAACAAAGGATGTCACAGGG AGCTGTGATCCTTATGTTGAAGTAAAAGTTGGAAACTACAAGGGTGTCACGAAGCATTTC GAGAAGAAAATCAACCCTGAATGGAATTATGTGTTCGCGTTCTCTCAGGATAGGATTCAG GCCTCTTACATTGAAGTATGTGTGAAAGATAAGGATGTTCTGTTGGATGATATGATAGGA AGAGTCGTGTTTGATCTCGTTGATGTACCGAGAAGAGTTCCACCGGATAGTTCATTAGCC CCACAGTGGTATAGGTTAGAGGATAAAAGAGGTGAAAAGTTGAAAAAAGGGGAAATCATG CTTGCTGTTTGGAGAGGAACTCAGGCAGACGAGGCGTTTTGTGATGCGTGGCATTCGGAT GCAGCAGCTGTGGGAAGTGAGGGGATTTCAAGAATTAGAGGAAAGGTATATCTTTCTCCC AGACTTTGGTATATCAGAGTTAATGTCATTGAATGTCAAGATTTGGTTCCAAGTGAAAAG AATCGACAACCCGAGTGTTGTGTGAAGGTTATGTGTGGGAATCAGGTCTTGAAAACGAAA ATTTCATCGATAAGAAGTTGCAGTCCAATGTGGAATGAGGACTTGGTTTTTGTTGTAGCT GAACCATTTGAAGAGCCTTTGGTTGTAACTGTGGAGGATAAAGTTGGATCGAATTTCGAG TTTTTGGGAAAATGTGTGCTTCCTTTAAGCATTGTTCCGAAAAGGCTGGACAACAAACCT GTTCCTTCTACATGGCACAATCTTGAGAAGCATACAGTTGTAGAAGGGGAAAAAAAGGAG ACTAAATTTGCTAGTAAGATTCATATGAGGCTTAGTTTGGATGGAGGATATCACGTGTTG GATGAATCGATACATTACAGTAGTGATTTCAAGCCAACGTCGAAGCTTTTATGGAAATCC AGCATTGGACTACTTGAATTGGGGATAATAAGTGCAACAGGCTTGTCAGCTATGAAGTCC AAGGATGGACGAGGGACGACAGATGCCTATTGTGTAGCTAAGTACGGGCCAAAATGGGTT CGTACAAGGACAATCATCGATAGCTTGTCACCACAATGGAATGAGCAGTACACTTGGGAA GTACATGATCCTTGTACTGTAATCACAGTAGGAGTGTTTGATAACGGATACCTACAAGGG GGGAAATGTACGAGCATTGGGAAGGTGAGGATTAGGCTGTCGACACTTGAAACGGAGAAG GTATACACACATTCCTACCCTCTTATTGTCCTGCACCCATCGGGCGTTAAAAAGATGGGA GAAGTTCAACTAGCTGTGAGGTTTTCGTGTACGTCTTATGTCAATATGTTGTCTAAATAC ACTCAACCTTTGTTTCCAAAGATGCATTACGCTCATCCAATGTCTATCACTCAGCAAGAT TTCCTCAGGTTCCAAACTATCCAAATACTTTCAACGAGGCTTGGACGAGCAGAGCCACCG TTGAAAAAAGAGGTCGTGGACTACATGCTAGACGTTGGTTCGCATATATGGAGCGTAAGG AGGGCTAAGGCTAACTTTTTCAGATTAATGTATGTTGTGAGTCCAATATTGGCTATTGGA AAATGGTTTGATCAAATATGTCATTGGAAGAATCCACTCACAACAATTCTAATCCATATA CTCTTTGTTATATTAGTCCTTTACCCTGGATTGATTGTTCCTACATTCTTTCTTTACCTA TTCTTGATTGGTATTTGGCACTATAGATTGAAACCAAGACATCCACCTCATATGGACATC CATATTTCACATGCTCACGGTGTTTTCCCCGATGATTTGGATGAAGAATTCGATACATTC CCAACATCAAGAGGCTCGGATAAGGTGAAGATGAGATATGATCGTTTGAGGAGCATCGGA GGCAGGATTCAGACCGTGGTAGGGGACTTAGCGACTCAAGGGGAAAGGTTTCATTCATTG TTAAGTTGGAGAGATCCAAGGGCATCGGCTTTGTTCGTGACATTCTGTTTGTTTGCTGCA ATAGTCATGTACGTCACACCATTCCAAGTTATCGTGATTCTCATAGGAATCTACGTGTTA AGGCACCCGAGATTTCGCCATAAAGTTCCTTCATTGTCTACTAGTTTCTTCAAGAGGCTG CCTGCAAGAGCAGATTGCATGTTATAA

Peptide Sequence

PEP ID	Solyc01g006620.3.1
PEP Infomation	C2 calcium/lipid-binding and GRAM domain protein (AHRD V3.3 *** A0A072ULK6_MEDTR)
Sequence	MQKGSIHEEFALKQTAPKIVGSGVMIGGDKVTVAYDLVEQMEYLYVRVVKAKELTKDVTG SCDPYVEVKVGNYKGVTKHFEKKINPEWNYVFAFSQDRIQASYIEVCVKDKDVLLDDMIG RVVFDLVDVPRRVPPDSSLAPQWYRLEDKRGEKLKKGEIMLAVWRGTQADEAFCDAWHSD AAAVGSEGISRIRGKVYLSPRLWYIRVNVIECQDLVPSEKNRQPECCVKVMCGNQVLKTK ISSIRSCSPMWNEDLVFVVAEPFEEPLVVTVEDKVGSNFEFLGKCVLPLSIVPKRLDNKP VPSTWHNLEKHTVVEGEKKETKFASKIHMRLSLDGGYHVLDESIHYSSDFKPTSKLLWKS SIGLLELGIISATGLSAMKSKDGRGTTDAYCVAKYGPKWVRTRTIIDSLSPQWNEQYTWE VHDPCTVITVGVFDNGYLQGGKCTSIGKVRIRLSTLETEKVYTHSYPLIVLHPSGVKKMG EVQLAVRFSCTSYVNMLSKYTQPLFPKMHYAHPMSITQQDFLRFQTIQILSTRLGRAEPP LKKEVVDYMLDVGSHIWSVRRAKANFFRLMYVVSPILAIGKWFDQICHWKNPLTTILIHI LFVILVLYPGLIVPTFFLYLFLIGIWHYRLKPRHPPHMDIHISHAHGVFPDDLDEEFDTF PTSRGSDKVKMRYDRLRSIGGRIQTVVGDLATQGERFHSLLSWRDPRASALFVTFCLFAA IVMYVTPFQVIVILIGIYVLRHPRFRHKVPSLSTSFFKRLPARADCML*

Transcript Sequence

Transcript ID	Solyc01g006620.3.1
Transcript Infomation	C2 calcium/lipid-binding and GRAM domain protein (AHRD V3.3 *** A0A072ULK6_MEDTR)
Sequence	ATGCAGAAAGGTTCAATACATGAAGAGTTTGCTTTAAAGCAAACAGCTCCGAAAATTGTT GGATCAGGGGTGATGATAGGAGGAGATAAGGTAACCGTCGCCTATGACCTCGTTGAGCAA ATGGAATATCTCTATGTTCGCGTTGTCAAGGCTAAAGAGTTAACAAAGGATGTCACAGGG AGCTGTGATCCTTATGTTGAAGTAAAAGTTGGAAACTACAAGGGTGTCACGAAGCATTTC GAGAAGAAAATCAACCCTGAATGGAATTATGTGTTCGCGTTCTCTCAGGATAGGATTCAG GCCTCTTACATTGAAGTATGTGTGAAAGATAAGGATGTTCTGTTGGATGATATGATAGGA AGAGTCGTGTTTGATCTCGTTGATGTACCGAGAAGAGTTCCACCGGATAGTTCATTAGCC CCACAGTGGTATAGGTTAGAGGATAAAAGAGGTGAAAAGTTGAAAAAAGGGGAAATCATG CTTGCTGTTTGGAGAGGAACTCAGGCAGACGAGGCGTTTTGTGATGCGTGGCATTCGGAT GCAGCAGCTGTGGGAAGTGAGGGGATTTCAAGAATTAGAGGAAAGGTATATCTTTCTCCC AGACTTTGGTATATCAGAGTTAATGTCATTGAATGTCAAGATTTGGTTCCAAGTGAAAAG AATCGACAACCCGAGTGTTGTGTGAAGGTTATGTGTGGGAATCAGGTCTTGAAAACGAAA ATTTCATCGATAAGAAGTTGCAGTCCAATGTGGAATGAGGACTTGGTTTTTGTTGTAGCT GAACCATTTGAAGAGCCTTTGGTTGTAACTGTGGAGGATAAAGTTGGATCGAATTTCGAG TTTTTGGGAAAATGTGTGCTTCCTTTAAGCATTGTTCCGAAAAGGCTGGACAACAAACCT GTTCCTTCTACATGGCACAATCTTGAGAAGCATACAGTTGTAGAAGGGGAAAAAAAGGAG ACTAAATTTGCTAGTAAGATTCATATGAGGCTTAGTTTGGATGGAGGATATCACGTGTTG GATGAATCGATACATTACAGTAGTGATTTCAAGCCAACGTCGAAGCTTTTATGGAAATCC AGCATTGGACTACTTGAATTGGGGATAATAAGTGCAACAGGCTTGTCAGCTATGAAGTCC AAGGATGGACGAGGGACGACAGATGCCTATTGTGTAGCTAAGTACGGGCCAAAATGGGTT CGTACAAGGACAATCATCGATAGCTTGTCACCACAATGGAATGAGCAGTACACTTGGGAA GTACATGATCCTTGTACTGTAATCACAGTAGGAGTGTTTGATAACGGATACCTACAAGGG GGGAAATGTACGAGCATTGGGAAGGTGAGGATTAGGCTGTCGACACTTGAAACGGAGAAG GTATACACACATTCCTACCCTCTTATTGTCCTGCACCCATCGGGCGTTAAAAAGATGGGA GAAGTTCAACTAGCTGTGAGGTTTTCGTGTACGTCTTATGTCAATATGTTGTCTAAATAC ACTCAACCTTTGTTTCCAAAGATGCATTACGCTCATCCAATGTCTATCACTCAGCAAGAT TTCCTCAGGTTCCAAACTATCCAAATACTTTCAACGAGGCTTGGACGAGCAGAGCCACCG TTGAAAAAAGAGGTCGTGGACTACATGCTAGACGTTGGTTCGCATATATGGAGCGTAAGG AGGGCTAAGGCTAACTTTTTCAGATTAATGTATGTTGTGAGTCCAATATTGGCTATTGGA AAATGGTTTGATCAAATATGTCATTGGAAGAATCCACTCACAACAATTCTAATCCATATA CTCTTTGTTATATTAGTCCTTTACCCTGGATTGATTGTTCCTACATTCTTTCTTTACCTA TTCTTGATTGGTATTTGGCACTATAGATTGAAACCAAGACATCCACCTCATATGGACATC CATATTTCACATGCTCACGGTGTTTTCCCCGATGATTTGGATGAAGAATTCGATACATTC CCAACATCAAGAGGCTCGGATAAGGTGAAGATGAGATATGATCGTTTGAGGAGCATCGGA GGCAGGATTCAGACCGTGGTAGGGGACTTAGCGACTCAAGGGGAAAGGTTTCATTCATTG TTAAGTTGGAGAGATCCAAGGGCATCGGCTTTGTTCGTGACATTCTGTTTGTTTGCTGCA ATAGTCATGTACGTCACACCATTCCAAGTTATCGTGATTCTCATAGGAATCTACGTGTTA AGGCACCCGAGATTTCGCCATAAAGTTCCTTCATTGTCTACTAGTTTCTTCAAGAGGCTG CCTGCAAGAGCAGATTGCATGTTATAA