Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g006110.3.1
CDS Infomation

PP2A regulatory subunit TAP46 (AHRD V3.3 *** TAP46_ARATH)
Sequence

ATGGGTGAATTGAATATGCAAGAGATGCCATTACCTGCTCTGTTCGAGCAAGCTAAAAAA
ATCCATGATTTGGCTTCGGAATCGAGCGTTGATCAAGGAATAGTGAGGAAAGGTTGTGAG
ATTTTGAGAGTGTGTGAAGAAATGATTGGGAAATTAGGGCTGTTTTCGCTTAATGAGACT
AAAGATGATATTAGCACAGCAAATCTCAAGTATATTCTGGTCCCTTATTATCTAGCGGAG
CTAACAGAAAAAATTGCAGAAGATGACAGGATAGAAGTACTCAAGGCTTCACAAGCTAAG
CTAAAGGAGTTCATTTCATTTTGTGAGACAATGGAACTTGTTCCTGAAGACGAGATAGAG
ACATCTACCCAAGGTGGATCTAGTTCTTCTGTAGATCGTAGAGCTAAAAAGATAGCTCGT
TTCAAACGTCAAAGAGCTGCTGAGTCAAAACTACTTGAATTGAAGGAGCGGAGAGAGCGT
CGTGGACGATCGACTAAAGCAGCTGCATTGTCAAGTCCTGTGGAAACTGGAGAAGAGGAC
GTGTTTGATGATGACGGTGAAGAAGAAAGGGAGGCATGGCTTACAACTATTTCCCTGGCC
CTTTGTAAGGCCTTTGATTTGCTTGAAATGCTGAAGAAAGAGGAAGAAATACTATCTGCT
GTCAGGGAGAAGCAGCTTCGGGATGGGGAGAAAGAATTTTCTCAGCTAATACTTGACGAA
CGCACCCAAAAAGTAGAATCTTGGCATCGTGATGCTGCTGCACGAGCTCGATATACAAAA
CCCGCAGCCCCCATCACCTGTGCCACTTTTGCACAAGATGTCATAGAAGGGAGGGCCAAG
GTCTCACAGGCGCATGACCATAAACACCAGCCTTTACTCTTTGGACCAGCAAGTCTTGTT
GGTATGAACCCTACAACTGAAAGGCAAAGAATAGCTGCCCAGGTCTTTCAGCCTCATTAT
AGATTACCAACGATGAGCATTGAAGAAGCTGGGCTAACAGAGATGAATATGATGAACGAA
TGGCAAGAAAGGAATGTTAAGCTCATGGAAGAAGCAACTTCTTCATGGTACAATGACGGT
CCCAAGACAAGGCCAAATGAAGATGACGAAGAAGATGATAATGATGATGCCGCCCAAGAA
AAGGCACGAGCATGGGATGACTGGAAAGATGACAACCCTCGTGGCGCTGGTAACAAGAAG
CTAACTCCTTGTGGTTAA

Peptide Sequence

PEP ID

Solyc01g006110.3.1
PEP Infomation

PP2A regulatory subunit TAP46 (AHRD V3.3 *** TAP46_ARATH)
Sequence

MGELNMQEMPLPALFEQAKKIHDLASESSVDQGIVRKGCEILRVCEEMIGKLGLFSLNET
KDDISTANLKYILVPYYLAELTEKIAEDDRIEVLKASQAKLKEFISFCETMELVPEDEIE
TSTQGGSSSSVDRRAKKIARFKRQRAAESKLLELKERRERRGRSTKAAALSSPVETGEED
VFDDDGEEEREAWLTTISLALCKAFDLLEMLKKEEEILSAVREKQLRDGEKEFSQLILDE
RTQKVESWHRDAAARARYTKPAAPITCATFAQDVIEGRAKVSQAHDHKHQPLLFGPASLV
GMNPTTERQRIAAQVFQPHYRLPTMSIEEAGLTEMNMMNEWQERNVKLMEEATSSWYNDG
PKTRPNEDDEEDDNDDAAQEKARAWDDWKDDNPRGAGNKKLTPCG*

Transcript Sequence

Transcript ID

Solyc01g006110.3.1
Transcript Infomation

PP2A regulatory subunit TAP46 (AHRD V3.3 *** TAP46_ARATH)
Sequence

GACTTTTACCCAAATTGCCGCGAAGATACTCGAACATCCTTTTATAGACCCGTTTTCCTT
TTTCTTTTTTTACAGATTCAAATCAAAGCCCTAATTTCAACAAATCTTCAATTTCCCCAA
ATTCAATTTCATAGATCACAAATCTGTGATTTTATAGCGTTTTCTTCATCAAATCCATAA
GCTTACTACTATCAGTAATGGGTGAATTGAATATGCAAGAGATGCCATTACCTGCTCTGT
TCGAGCAAGCTAAAAAAATCCATGATTTGGCTTCGGAATCGAGCGTTGATCAAGGAATAG
TGAGGAAAGGTTGTGAGATTTTGAGAGTGTGTGAAGAAATGATTGGGAAATTAGGGCTGT
TTTCGCTTAATGAGACTAAAGATGATATTAGCACAGCAAATCTCAAGTATATTCTGGTCC
CTTATTATCTAGCGGAGCTAACAGAAAAAATTGCAGAAGATGACAGGATAGAAGTACTCA
AGGCTTCACAAGCTAAGCTAAAGGAGTTCATTTCATTTTGTGAGACAATGGAACTTGTTC
CTGAAGACGAGATAGAGACATCTACCCAAGGTGGATCTAGTTCTTCTGTAGATCGTAGAG
CTAAAAAGATAGCTCGTTTCAAACGTCAAAGAGCTGCTGAGTCAAAACTACTTGAATTGA
AGGAGCGGAGAGAGCGTCGTGGACGATCGACTAAAGCAGCTGCATTGTCAAGTCCTGTGG
AAACTGGAGAAGAGGACGTGTTTGATGATGACGGTGAAGAAGAAAGGGAGGCATGGCTTA
CAACTATTTCCCTGGCCCTTTGTAAGGCCTTTGATTTGCTTGAAATGCTGAAGAAAGAGG
AAGAAATACTATCTGCTGTCAGGGAGAAGCAGCTTCGGGATGGGGAGAAAGAATTTTCTC
AGCTAATACTTGACGAACGCACCCAAAAAGTAGAATCTTGGCATCGTGATGCTGCTGCAC
GAGCTCGATATACAAAACCCGCAGCCCCCATCACCTGTGCCACTTTTGCACAAGATGTCA
TAGAAGGGAGGGCCAAGGTCTCACAGGCGCATGACCATAAACACCAGCCTTTACTCTTTG
GACCAGCAAGTCTTGTTGGTATGAACCCTACAACTGAAAGGCAAAGAATAGCTGCCCAGG
TCTTTCAGCCTCATTATAGATTACCAACGATGAGCATTGAAGAAGCTGGGCTAACAGAGA
TGAATATGATGAACGAATGGCAAGAAAGGAATGTTAAGCTCATGGAAGAAGCAACTTCTT
CATGGTACAATGACGGTCCCAAGACAAGGCCAAATGAAGATGACGAAGAAGATGATAATG
ATGATGCCGCCCAAGAAAAGGCACGAGCATGGGATGACTGGAAAGATGACAACCCTCGTG
GCGCTGGTAACAAGAAGCTAACTCCTTGTGGTTAAAAGCAATTACATCAGAATCTAAGAA
CTCCAATCAATAACCTTTTTTAGCACCTAGTTTATAACTCAATTGACATGCTACACCAGT
TTGCCATTAAGTTGGAAACCATTTTATTCTTGTTTCTATATGTGTTGCAATTTTTGTGTA
ATGTTGAAGGTAGATTATGTATTATAAAGTGGTTTTTATTTTATAATTGGTAATGGAACT
TTCTCTAGTAA