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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g005930.3.1
CDS Infomation

Lipase/lipooxygenase, PLAT/LH2 (AHRD V3.3 *** A0A118JU91_CYNCS)
Sequence

ATGGAGTCATTATTCATCAAAAATTTGATATTTACAACTCAAATTTCTGTTCCAAAGAGT
AATTCAATAAACCCAATTCCTATAAGAAGGATTTGTAGCTCTTCTTGGAAAATTCACTTC
AAAAAATCAGACTTTCAAGATTTTCGGGACTATGTAAAACCTTCCCGCCTTTTACCAGCC
ACTAACGTAAAATTCTGTGGAGATTGGTCGCTGGAAACATTGCTCAATCATTCGAAATTT
GATAGATCCAATTCGCTTTACCAAGTCAAGCTGCAAACGAGTAATGCATATGGATCAGAT
CTTACCGATATAAACTCTGAAGTCCTGCTTTGTTTGATAGATGAAAATGGTGACTCAATC
TTACAGAGGATATCGGCTGGTCTAGAGAACGCTCGTTTTATGCAGTCACAGGATTCTGAT
CTTCTCCAATTCCGAAGAGGTTCCGTAGATGAGTTCATATTTGAAGGACCTAAACTTGGA
AAACTTGCAGCTGTTTGGATCAGTCCAGAATCAGGTCAGTGGAGACTCGGAGGCATGAAC
GTAACTGTCATTTCCCTTCTAAATTCCGTATTAATAGGAAATGAGAAGAATTTATCAGAC
TGTACTGCCATCCAGTATGACTTTGATATCGAGGATGTCTTGCTCGGTGAGAAAAGCGAT
AGTTCCATGATAGAGTTTAGACCATGTTCGGTTACTGAGTTTTCCGAGGACAACATTATA
TCATTAAGTGAGAAAACCTCGCCATCATCTTCCGTTAGTACACAGAACATATCAAACGAA
GACACAATGAAGGAATACACAGATTTGAAGTTATCTTTATTGGTCTACGATGCAATCCTT
ACTATTGCTGGCTCGTCTATTGCATTCTTAGCCGGAGATAAGTCTGCAATCGCCTTCTTA
ACAGGTGGTATCGTAGGATTCCTCTATCTACTACTCGTGCAGAGATCTGTTGACGGTATA
CCATCTTCAGAACTGACTCAAAGTAACAGAACAGAAACTCTCGATCAAACCGATAAAGGA
TTCAAAGGCTCAGTGTTGAACATAGTATTAGCTCTTGCAGTTACAACCGTTGCAGCAAAA
TATGCTCTCGGAGACGTTGCTAGAGTGCTGACACCTCAAGATCTCATGCTTGGAACGATC
GGATTTCTACTGTCTAAGGTATCTGTTATTTTAGCTGCTTTCGTACCGATAACAGGAGGT
TTAAGAGAGAACAAATGA

Peptide Sequence

PEP ID

Solyc01g005930.3.1
PEP Infomation

Lipase/lipooxygenase, PLAT/LH2 (AHRD V3.3 *** A0A118JU91_CYNCS)
Sequence

MESLFIKNLIFTTQISVPKSNSINPIPIRRICSSSWKIHFKKSDFQDFRDYVKPSRLLPA
TNVKFCGDWSLETLLNHSKFDRSNSLYQVKLQTSNAYGSDLTDINSEVLLCLIDENGDSI
LQRISAGLENARFMQSQDSDLLQFRRGSVDEFIFEGPKLGKLAAVWISPESGQWRLGGMN
VTVISLLNSVLIGNEKNLSDCTAIQYDFDIEDVLLGEKSDSSMIEFRPCSVTEFSEDNII
SLSEKTSPSSSVSTQNISNEDTMKEYTDLKLSLLVYDAILTIAGSSIAFLAGDKSAIAFL
TGGIVGFLYLLLVQRSVDGIPSSELTQSNRTETLDQTDKGFKGSVLNIVLALAVTTVAAK
YALGDVARVLTPQDLMLGTIGFLLSKVSVILAAFVPITGGLRENK*

Transcript Sequence

Transcript ID

Solyc01g005930.3.1
Transcript Infomation

Lipase/lipooxygenase, PLAT/LH2 (AHRD V3.3 *** A0A118JU91_CYNCS)
Sequence

TTTCTTGTTTCTTCTTTTCTTCTATCACTCAAATTCAAGAAAAAATGAATTTTTTTGAAG
AGAAATTTAGCTAAAAATGGAGTCATTATTCATCAAAAATTTGATATTTACAACTCAAAT
TTCTGTTCCAAAGAGTAATTCAATAAACCCAATTCCTATAAGAAGGATTTGTAGCTCTTC
TTGGAAAATTCACTTCAAAAAATCAGACTTTCAAGATTTTCGGGACTATGTAAAACCTTC
CCGCCTTTTACCAGCCACTAACGTAAAATTCTGTGGAGATTGGTCGCTGGAAACATTGCT
CAATCATTCGAAATTTGATAGATCCAATTCGCTTTACCAAGTCAAGCTGCAAACGAGTAA
TGCATATGGATCAGATCTTACCGATATAAACTCTGAAGTCCTGCTTTGTTTGATAGATGA
AAATGGTGACTCAATCTTACAGAGGATATCGGCTGGTCTAGAGAACGCTCGTTTTATGCA
GTCACAGGATTCTGATCTTCTCCAATTCCGAAGAGGTTCCGTAGATGAGTTCATATTTGA
AGGACCTAAACTTGGAAAACTTGCAGCTGTTTGGATCAGTCCAGAATCAGGTCAGTGGAG
ACTCGGAGGCATGAACGTAACTGTCATTTCCCTTCTAAATTCCGTATTAATAGGAAATGA
GAAGAATTTATCAGACTGTACTGCCATCCAGTATGACTTTGATATCGAGGATGTCTTGCT
CGGTGAGAAAAGCGATAGTTCCATGATAGAGTTTAGACCATGTTCGGTTACTGAGTTTTC
CGAGGACAACATTATATCATTAAGTGAGAAAACCTCGCCATCATCTTCCGTTAGTACACA
GAACATATCAAACGAAGACACAATGAAGGAATACACAGATTTGAAGTTATCTTTATTGGT
CTACGATGCAATCCTTACTATTGCTGGCTCGTCTATTGCATTCTTAGCCGGAGATAAGTC
TGCAATCGCCTTCTTAACAGGTGGTATCGTAGGATTCCTCTATCTACTACTCGTGCAGAG
ATCTGTTGACGGTATACCATCTTCAGAACTGACTCAAAGTAACAGAACAGAAACTCTCGA
TCAAACCGATAAAGGATTCAAAGGCTCAGTGTTGAACATAGTATTAGCTCTTGCAGTTAC
AACCGTTGCAGCAAAATATGCTCTCGGAGACGTTGCTAGAGTGCTGACACCTCAAGATCT
CATGCTTGGAACGATCGGATTTCTACTGTCTAAGGTATCTGTTATTTTAGCTGCTTTCGT
ACCGATAACAGGAGGTTTAAGAGAGAACAAATGATACTATACTCATTCATAACAAAACAG
ATAGATGTATAGAATCGACGTATTTGTTTTACACACTTGTTTTTCGATGTTTCTATACTT
GAGCAGAGAGTCTATCGGAAACTAGATTATATCTGATTGTAGAATTCCGTGCCAAATTTA
CGTGTATAAA