Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g005430.3.1
CDS Infomation

UBX domain-containing protein (AHRD V3.3 *** A0A0K9Q356_ZOSMR)
Sequence

ATGGGTGATATGAAGGATAAAATGAAGGGGTTCATGAAAAAGGTGTCTTTTTCATCTTCA
GGTAAGTTTAAAGGCCAAGGTAGAGTATTGGGTAGTTCTTCATCATCTTCAGGGCCACCC
CCAAATCATGTTAATAATTTGTCATCACAAAATTTACCTTCAAAGCCAAATACAAAATCA
TTGGTTAAAAAAACAAGTGATTCTGATGAAAGAATTGATAATAAATGTGTTAATCATGTT
AATAAGAGTGAGTTAAAGGATGGTTTTGATCCATATGGTGAATTAGTCACTTCTGGTAAG
AGGAATCCAAAAGGGTATTCATTAAATGTTTTTGAATGTCCTGTTTGTTGTGCTGTTTTT
GGTTCTGAAGAAGAGGTTTCAAGTCATATTGATAATTGTTTAGCCTCTGAAGTGAGTGAT
TTGGGAGTTGAAAATAAAGATGAAGAAGTTAAGAGTGGAATGGAAGAATGTGTTAGTGTG
TATGTTTCAGGAAAGCCATTAGATGGATCAGTGGAGGTTGTTGTAAAGTTGTTAAAGAAT
ATCGGGAAGGAGCCAACGAATGCGAAGTTTAGGAAGATACGGATGGGGAATCCGAAGATA
AAGGAAGCTATAGGTGATGTTGTAGGAGGAGTTGAGCTATTGGAATTTGTTGGATTTGAG
TTGAAAGAAGAAGGTGGGGAAATTTGGGGTGTGATGGATGTTCCTTCTGAAGAACAACTT
GTTAAACTTAAGAATGTAGTTTCGCTTTTGGAACCAAAGAAGGTTGAAGAGTTGGCATCA
GCATCCCAAGTTAAGGCGGCGAGGAAACCAGTTGAGCCGAAGAAGATTGATAGACAGATT
AAAGTGTTCTTTTCTGTTCCGGAGAGCGTTGCTGCCAAAATTGTGCTACCTGACTCATTC
TTTAACCTCACACATGAGGAATTGAGAAGAGAGGCAGAGATGAAGAGGAAGAAACTAGAG
GAGTCGAAATTATTGATTCCTAAATCTTTTCGTGAAAAGCAGGCAAAAGCTGCAAGAAAG
AAGTACAACAGATCCATTATCCGAATTCAGTTTCCAGATGGAGTATTGCTTCAAGGTGTC
TTTCTACCTTCTGAGCCAACTAGTGCTCTTTATGAGTTTGTGAGCTCGGCGTTAAAGGAA
CCAAGCTTAGAGTTTGATTTGTTACATCCGGTGCTTGTCAAGAGGCGGGTGATACCCCAT
TTTCCAGCTACCGGGGAGAGGGCTATAACACTTGAAGAGGAGGATTTGATTCCTTCAGCT
CTACTCAAATTTAAACCTATAGAAACAGATTCCGTCGTTTTTACAGGTCTTTGCAATGAA
CTTCTTGAAATCAGCGAGCCACTCGAGACTGGATCAGCTTCTTCGTCGTAA

Peptide Sequence

PEP ID

Solyc01g005430.3.1
PEP Infomation

UBX domain-containing protein (AHRD V3.3 *** A0A0K9Q356_ZOSMR)
Sequence

MGDMKDKMKGFMKKVSFSSSGKFKGQGRVLGSSSSSSGPPPNHVNNLSSQNLPSKPNTKS
LVKKTSDSDERIDNKCVNHVNKSELKDGFDPYGELVTSGKRNPKGYSLNVFECPVCCAVF
GSEEEVSSHIDNCLASEVSDLGVENKDEEVKSGMEECVSVYVSGKPLDGSVEVVVKLLKN
IGKEPTNAKFRKIRMGNPKIKEAIGDVVGGVELLEFVGFELKEEGGEIWGVMDVPSEEQL
VKLKNVVSLLEPKKVEELASASQVKAARKPVEPKKIDRQIKVFFSVPESVAAKIVLPDSF
FNLTHEELRREAEMKRKKLEESKLLIPKSFREKQAKAARKKYNRSIIRIQFPDGVLLQGV
FLPSEPTSALYEFVSSALKEPSLEFDLLHPVLVKRRVIPHFPATGERAITLEEEDLIPSA
LLKFKPIETDSVVFTGLCNELLEISEPLETGSASSS*

Transcript Sequence

Transcript ID

Solyc01g005430.3.1
Transcript Infomation

UBX domain-containing protein (AHRD V3.3 *** A0A0K9Q356_ZOSMR)
Sequence

AAGCAACTTGATTCATCGTGACTAAAACTTCAATTTTCTTGAGACTCGCTTACTTGCTTA
TGTTATACCTCTTCTTTTACTAATTCCGCCTCAAAATTCCCGTGTTTTATAGAACATTCC
ATCCAAACACATCTTAATTAAAAAAATACAAGATTAGATTTTTTTTTATAAATAAAAAAA
AAATTCTTATTTTCCACTTTCTCATTATTTTTCTTCTTCTTCCCAATTTTCAACTTTCAA
GAAAACCTAAGCTTTTTCCTTAGATTTCTCAGTCCTATAAAGAGATCTAAGGGGAAAAAA
ATCCCTTTTTTTCACTTTCTTGATATATACAAACACAAATTAAGAAACCCCATATAGATA
AAGATTGAATTTTTTTCAAGAATTTGATTTGATTTGATTGATTGATAGGTTTTAGCAAAA
GGGTGTTGTTAAAAAATGGGTGATATGAAGGATAAAATGAAGGGGTTCATGAAAAAGGTG
TCTTTTTCATCTTCAGGTAAGTTTAAAGGCCAAGGTAGAGTATTGGGTAGTTCTTCATCA
TCTTCAGGGCCACCCCCAAATCATGTTAATAATTTGTCATCACAAAATTTACCTTCAAAG
CCAAATACAAAATCATTGGTTAAAAAAACAAGTGATTCTGATGAAAGAATTGATAATAAA
TGTGTTAATCATGTTAATAAGAGTGAGTTAAAGGATGGTTTTGATCCATATGGTGAATTA
GTCACTTCTGGTAAGAGGAATCCAAAAGGGTATTCATTAAATGTTTTTGAATGTCCTGTT
TGTTGTGCTGTTTTTGGTTCTGAAGAAGAGGTTTCAAGTCATATTGATAATTGTTTAGCC
TCTGAAGTGAGTGATTTGGGAGTTGAAAATAAAGATGAAGAAGTTAAGAGTGGAATGGAA
GAATGTGTTAGTGTGTATGTTTCAGGAAAGCCATTAGATGGATCAGTGGAGGTTGTTGTA
AAGTTGTTAAAGAATATCGGGAAGGAGCCAACGAATGCGAAGTTTAGGAAGATACGGATG
GGGAATCCGAAGATAAAGGAAGCTATAGGTGATGTTGTAGGAGGAGTTGAGCTATTGGAA
TTTGTTGGATTTGAGTTGAAAGAAGAAGGTGGGGAAATTTGGGGTGTGATGGATGTTCCT
TCTGAAGAACAACTTGTTAAACTTAAGAATGTAGTTTCGCTTTTGGAACCAAAGAAGGTT
GAAGAGTTGGCATCAGCATCCCAAGTTAAGGCGGCGAGGAAACCAGTTGAGCCGAAGAAG
ATTGATAGACAGATTAAAGTGTTCTTTTCTGTTCCGGAGAGCGTTGCTGCCAAAATTGTG
CTACCTGACTCATTCTTTAACCTCACACATGAGGAATTGAGAAGAGAGGCAGAGATGAAG
AGGAAGAAACTAGAGGAGTCGAAATTATTGATTCCTAAATCTTTTCGTGAAAAGCAGGCA
AAAGCTGCAAGAAAGAAGTACAACAGATCCATTATCCGAATTCAGTTTCCAGATGGAGTA
TTGCTTCAAGGTGTCTTTCTACCTTCTGAGCCAACTAGTGCTCTTTATGAGTTTGTGAGC
TCGGCGTTAAAGGAACCAAGCTTAGAGTTTGATTTGTTACATCCGGTGCTTGTCAAGAGG
CGGGTGATACCCCATTTTCCAGCTACCGGGGAGAGGGCTATAACACTTGAAGAGGAGGAT
TTGATTCCTTCAGCTCTACTCAAATTTAAACCTATAGAAACAGATTCCGTCGTTTTTACA
GGTCTTTGCAATGAACTTCTTGAAATCAGCGAGCCACTCGAGACTGGATCAGCTTCTTCG
TCGTAAGCCTCTGGCTCGCTCTGTGGACGTCATAGTTACATCGGAGACCACTAATTCATG
AATTTTTCTATTTTGTTTACCCTTTTTCTGCATATTCTGGTTTTGTGGAAATGATAGGCT
AACTGTACAGTCCTGTTGCATTAATACAACAGTTTTGTCATAAAAAGTTTGGTTTCAAAT
TAATTGAATATATTTGAGAAGTTGATAATTTGATTGATGAAATACAAGACAAATCTATTT
TGTAGGTGTTGAAATATGTCCAATATGAGAAACATCTATTTTTATT