Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc00g231680.2.1
CDS Infomation

(1-4)-beta-mannan endohydrolase
Sequence

ATGTCTTATGCAAGAAGAAGTTGCATTTGTGGGCTCTTTCTCTTGTTCCTAGCTCTTGTT
TGTGAAGCAAATTCGGGGTTTATAGGAGTTAAGGATTCTCATTTTGAACTCAATGGATCT
CCTTTTCTATTCAATGGTTTCAACTCATATTGGTTGATGCATGTTGCTGCTGACCCTACT
GAGAGGTACAAAGTCACTGAAGTTCTTAAAGATGCTTCTGTTGCTGGTCTTTCTGTTTGT
CGTACTTGGGCTTTTAGTGATGGAGGTGATAGAGCATTACAAATATCACCTGGTATTTAT
GATGAACGTGTTTTTCAGGGTTTGGATTTTGTAATCGCGGAAGCTAAGAAATATGGTATT
CGTTTAATCTTGAGCTTTGTGAATCAATGGAACGACTTTGGAGGAAAAGCTCAATATGTT
TGGTGGGCACGAAATGCAGGAGCTCAGATTAGTAATGACGATGAATTCTATACTCATCCT
ATGCTCAAAAAATACTTGAAGAACCACATTGAGAAAGTGGTTACAAGGTTGAATAGTATT
ACTAAAGTTGCTTACAAAGATGATCCGACAATTATGGCATGGGAACTCATGAATGAGCCT
CGCGATCAAGCTGACTATTCAGGAAAAACTGTTAATGGTTGGGTTCAAGAAATGGCAAGT
TTTGTGAAGTCATTAGACAACAAACACTTGTTAGAGGTTGGAATGGAGGGATTTTATGGT
GATTCAATTCCTGAAAGGAAGTCAGTTAATCCTGGTTATCAAGTTGGAACAGATTTCATT
AGTAATCATCTTATCAATGAAATTGATTTTGCTACTATCCATGCATACACTGACCAATGG
GTGTCTGGACAAAGCGATGATGCACAGTTGGTGTGGATGGAAAAGTGGATAACAAGTCAT
TGGGAAGATGCAAGAAATATATTAAAGAAACCTCTAGTGCTTGCTGAATTTGGAAAGTCT
AGTAGAGGTCAAGGATCAAGAGATATATTTATGAGTAGTGTATATAGAAATGTGTACAAT
TTGGCAAAAGAAGGTGGAACAATGGCAGGAAGTTTAGTTTGGCAACTAATGGCACATGGA
ATGGAGAATTATGATGATGGCTATTGCATTGTTTTGGGACAAACCCCTTCAACTACACAA
ATTATTTCTGACCAAGCTCATGTCATGACAGCTTTGGCTCGTTCTTTGAATTGA

Peptide Sequence

PEP ID

Solyc00g231680.2.1
PEP Infomation

(1-4)-beta-mannan endohydrolase
Sequence

MSYARRSCICGLFLLFLALVCEANSGFIGVKDSHFELNGSPFLFNGFNSYWLMHVAADPT
ERYKVTEVLKDASVAGLSVCRTWAFSDGGDRALQISPGIYDERVFQGLDFVIAEAKKYGI
RLILSFVNQWNDFGGKAQYVWWARNAGAQISNDDEFYTHPMLKKYLKNHIEKVVTRLNSI
TKVAYKDDPTIMAWELMNEPRDQADYSGKTVNGWVQEMASFVKSLDNKHLLEVGMEGFYG
DSIPERKSVNPGYQVGTDFISNHLINEIDFATIHAYTDQWVSGQSDDAQLVWMEKWITSH
WEDARNILKKPLVLAEFGKSSRGQGSRDIFMSSVYRNVYNLAKEGGTMAGSLVWQLMAHG
MENYDDGYCIVLGQTPSTTQIISDQAHVMTALARSLN*

Transcript Sequence

Transcript ID

Solyc00g231680.2.1
Transcript Infomation

(1-4)-beta-mannan endohydrolase
Sequence

CAAAATGTCTTATGCAAGAAGAAGTTGCATTTGTGGGCTCTTTCTCTTGTTCCTAGCTCT
TGTTTGTGAAGCAAATTCGGGGTTTATAGGAGTTAAGGATTCTCATTTTGAACTCAATGG
ATCTCCTTTTCTATTCAATGGTTTCAACTCATATTGGTTGATGCATGTTGCTGCTGACCC
TACTGAGAGGTACAAAGTCACTGAAGTTCTTAAAGATGCTTCTGTTGCTGGTCTTTCTGT
TTGTCGTACTTGGGCTTTTAGTGATGGAGGTGATAGAGCATTACAAATATCACCTGGTAT
TTATGATGAACGTGTTTTTCAGGGTTTGGATTTTGTAATCGCGGAAGCTAAGAAATATGG
TATTCGTTTAATCTTGAGCTTTGTGAATCAATGGAACGACTTTGGAGGAAAAGCTCAATA
TGTTTGGTGGGCACGAAATGCAGGAGCTCAGATTAGTAATGACGATGAATTCTATACTCA
TCCTATGCTCAAAAAATACTTGAAGAACCACATTGAGAAAGTGGTTACAAGGTTGAATAG
TATTACTAAAGTTGCTTACAAAGATGATCCGACAATTATGGCATGGGAACTCATGAATGA
GCCTCGCGATCAAGCTGACTATTCAGGAAAAACTGTTAATGGTTGGGTTCAAGAAATGGC
AAGTTTTGTGAAGTCATTAGACAACAAACACTTGTTAGAGGTTGGAATGGAGGGATTTTA
TGGTGATTCAATTCCTGAAAGGAAGTCAGTTAATCCTGGTTATCAAGTTGGAACAGATTT
CATTAGTAATCATCTTATCAATGAAATTGATTTTGCTACTATCCATGCATACACTGACCA
ATGGGTGTCTGGACAAAGCGATGATGCACAGTTGGTGTGGATGGAAAAGTGGATAACAAG
TCATTGGGAAGATGCAAGAAATATATTAAAGAAACCTCTAGTGCTTGCTGAATTTGGAAA
GTCTAGTAGAGGTCAAGGATCAAGAGATATATTTATGAGTAGTGTATATAGAAATGTGTA
CAATTTGGCAAAAGAAGGTGGAACAATGGCAGGAAGTTTAGTTTGGCAACTAATGGCACA
TGGAATGGAGAATTATGATGATGGCTATTGCATTGTTTTGGGACAAACCCCTTCAACTAC
ACAAATTATTTCTGACCAAGCTCATGTCATGACAGCTTTGGCTCGTTCTTTGAATTGATG
AGTGAATTAAGTGAAAACATCATTATGAAATTATCAATTTATAAGTGGATTTGAGTGATC
CTAAATCCATCAATAATAGTATCACCAAACATGTTGAAGTTGATTAAACTCAAGAATGTA
ATTGAATAAATTATTTCAAAAAGAAAGTTATGTTTT