Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc00g212260.2.1
CDS Infomation

Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4)
Sequence

ATGTCGAAACTGCTGAAGCCTGATCCAGAACTGGCTGATACAATTTATAGCAAATGCTCA
AGTTTAAGCAATTGGTATGGCTTGATTCCTAAACTCTTCCCGAATACAAAGTACATTTAT
GGTATCATGACAGGTTCCATGGAGCCTTACTTGAAGAAACTGAGGCACTATGCAGGGGAA
TTACCTCTAGTGAGTGCAGATTATGGTTCTTCTGAAGGATGGGTTGGAGTAAATGTTAAC
CCAAAATCCCCCCCTGAGATGGTTACTTATGCAGTGTTACCAAATACTGGCTATTTTGAA
TTCCTCCCACTCGAGGAAAATCTCATTGGCATGGAGCAAGCAAATTCTCCTGTCTGCCTG
ACTGAAGTTAAACTTGGTGAAGAGTATGAAATTGTCTTCACCAATTTTGCAGGTTTATAT
CGTTATAGACTGGGTGATGTTGTGAAGATAAAAAGATTCCACAATAGCACTCCAGAGCTC
CAGTTCGTCTGTCGAAGGAACCTTGTGCTGAGCATTAACATAGACAAGAACACCGAGAAA
GATTTGCAACTAGCTGTGGAAGCTGCAGGCAAGCACTTAGTTGACGAAAAACTAGAAGTG
GTGGACTTCACAAGCCATGCCAACATCTCATCTGATCCAGGACACTATGTCATCTTCTGG
GAACTGAGTGGGGAAGCAACTGATGAAATATTGCAAGAGTGCTGCAACTGTCTGGACAAA
TCGTTCCTCGATTCAAGCTATGTGAACAACAGGAGAATGAATACAATTGGGGCACTTGAA
CTGCGGATTGTGAAGAGGGGAACCTTTAATAAGATATTGGATCATTTCGTTGGATTAGGA
GGCGCGGTGAGCCAGTTTAAAACCCCTAGATGTGTTGGTCCAAAAAATAGCTCATTGATA
CAAATACTGTCTACTAATGTTGTTAAGAGCTATTCTAGTACTGCTATCTTTTAA

Peptide Sequence

PEP ID

Solyc00g212260.2.1
PEP Infomation

Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4)
Sequence

MSKLLKPDPELADTIYSKCSSLSNWYGLIPKLFPNTKYIYGIMTGSMEPYLKKLRHYAGE
LPLVSADYGSSEGWVGVNVNPKSPPEMVTYAVLPNTGYFEFLPLEENLIGMEQANSPVCL
TEVKLGEEYEIVFTNFAGLYRYRLGDVVKIKRFHNSTPELQFVCRRNLVLSINIDKNTEK
DLQLAVEAAGKHLVDEKLEVVDFTSHANISSDPGHYVIFWELSGEATDEILQECCNCLDK
SFLDSSYVNNRRMNTIGALELRIVKRGTFNKILDHFVGLGGAVSQFKTPRCVGPKNSSLI
QILSTNVVKSYSSTAIF*

Transcript Sequence

Transcript ID

Solyc00g212260.2.1
Transcript Infomation

Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4)
Sequence

GCAATGAAGTTCAAGTTGTTTCGTCTGCATTTGCACATAGCATTGTCCAAGCTTTTCGAA
CTTTTGAACAAGTATGGGAAGAACTTGTCGTTGACATAAGGGAGGGAGTCTTATCGAGCC
GTGTCACAGTCCCATCTATAAGATTGGCCATGTCGAAACTGCTGAAGCCTGATCCAGAAC
TGGCTGATACAATTTATAGCAAATGCTCAAGTTTAAGCAATTGGTATGGCTTGATTCCTA
AACTCTTCCCGAATACAAAGTACATTTATGGTATCATGACAGGTTCCATGGAGCCTTACT
TGAAGAAACTGAGGCACTATGCAGGGGAATTACCTCTAGTGAGTGCAGATTATGGTTCTT
CTGAAGGATGGGTTGGAGTAAATGTTAACCCAAAATCCCCCCCTGAGATGGTTACTTATG
CAGTGTTACCAAATACTGGCTATTTTGAATTCCTCCCACTCGAGGAAAATCTCATTGGCA
TGGAGCAAGCAAATTCTCCTGTCTGCCTGACTGAAGTTAAACTTGGTGAAGAGTATGAAA
TTGTCTTCACCAATTTTGCAGGTTTATATCGTTATAGACTGGGTGATGTTGTGAAGATAA
AAAGATTCCACAATAGCACTCCAGAGCTCCAGTTCGTCTGTCGAAGGAACCTTGTGCTGA
GCATTAACATAGACAAGAACACCGAGAAAGATTTGCAACTAGCTGTGGAAGCTGCAGGCA
AGCACTTAGTTGACGAAAAACTAGAAGTGGTGGACTTCACAAGCCATGCCAACATCTCAT
CTGATCCAGGACACTATGTCATCTTCTGGGAACTGAGTGGGGAAGCAACTGATGAAATAT
TGCAAGAGTGCTGCAACTGTCTGGACAAATCGTTCCTCGATTCAAGCTATGTGAACAACA
GGAGAATGAATACAATTGGGGCACTTGAACTGCGGATTGTGAAGAGGGGAACCTTTAATA
AGATATTGGATCATTTCGTTGGATTAGGAGGCGCGGTGAGCCAGTTTAAAACCCCTAGAT
GTGTTGGTCCAAAAAATAGCTCATTGATACAAATACTGTCTACTAATGTTGTTAAGAGCT
ATTCTAGTACTGCTATCTTTTAAATTTATGTATGTATCTTTCCAAATTTGTAGTCCTGCA
AGGATTTCTTATCTAAATAGTGTAATATATATCTATGTTTTTTTTGGACTAATATCTATA
TATAGAGAGAATTGACGGTGGATACAATCATTGAGCATAATTAGTAGTGGTTTGGGATTG
CATTTGTATGCTGATGAATGCACAATGAAGGTAGCTAGAACCTCCTTAGCCAAAGTTTTG
ATTTAGCTTGATATAAAAAAAGAACTCCCAGTTTCAGTTAGAATGGAGGATCCAAATGGA
AGAGTGTTTGATCTGAAGGTGATTTATGAATTGATACCTGTATATTGTCCAAAGTGTCTC
CAGGTTGGACATAAATGCACAACTCACCTAATGTACAAACCAAACCCATTGTTCGTAAGG
ATAAGCCACAAGCTTAAAAGTGTCAACCTAAACGGGATGACCAGAAGTTGCCAAATCTTG
CTGATCCTATAGGGTTACAGTTGAATGAGTGCCAAACGACCCCGGTATAATTGCACATTC
CAACAGTGAACTTAAGGCAGAGAGACAAGGGGAGCTGATCAAAGAAAAGCAGGACGATAA
ATGGACGGAGGTAAGACGAATATCAGCAGCAAGAAGTGTGCAGAAACCTTTATTAATACC
TGGTGTTAATAGTCTGAATGATTTCAGCCATATTAATTCTACATTTGTTCAATTTTTCT