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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc00g060810.3.1
CDS Infomation

Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN)
Sequence

ATGGGCTTGAAAGGTAAGTTGAGTGCTTCTATAGAAATAAATTGTGGAGGACACTTAATG
TATGATTATTTATACACCAAACCTCATCTTATACCCAACATAACACCTAGCAAGATACTG
AGTTTTGAGTTTATCGAAGGCGAAATCATAAAGGTTGGTTCAGTTATTAGGTGGAAATAT
AACGATGATGGAAAAGATAAGATTGTAGAGGAAGTGTTTGAAGCCATTGATCCTGAAAGT
AAATCAATCACTTCGAAAATAATTGGCGGAGATATGTTAGAGCTGTATGATTCCTTCACT
TTTATTTCGTCAAGTGATCAGCAATGGGCTACATGGACATTTCTGTACAAAAAGAAAACT
GAAGAAACTCCGGAACCTCTTGCTCTATTGGGTTTTCTCATTGGTGTGACAAAAGATATA
GAGAATCACCTTCTCAAGTAA

Peptide Sequence

PEP ID

Solyc00g060810.3.1
PEP Infomation

Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN)
Sequence

MGLKGKLSASIEINCGGHLMYDYLYTKPHLIPNITPSKILSFEFIEGEIIKVGSVIRWKY
NDDGKDKIVEEVFEAIDPESKSITSKIIGGDMLELYDSFTFISSSDQQWATWTFLYKKKT
EETPEPLALLGFLIGVTKDIENHLLK*

Transcript Sequence

Transcript ID

Solyc00g060810.3.1
Transcript Infomation

Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN)
Sequence

TTAAATTCTAATTTTCCATAATATGTCTTATCATGTTCATAAAACTTTTTATACAGCTAA
ATGAAATCTATATAAAGGGTACGATTTTTAATTATTTTATCATCAATCTATAAATATTTT
TTCAGCATATCTAAAAAATGGGCTTGAAAGGTAAGTTGAGTGCTTCTATAGAAATAAATT
GTGGAGGACACTTAATGTATGATTATTTATACACCAAACCTCATCTTATACCCAACATAA
CACCTAGCAAGATACTGAGTTTTGAGTTTATCGAAGGCGAAATCATAAAGGTTGGTTCAG
TTATTAGGTGGAAATATAACGATGATGGAAAAGATAAGATTGTAGAGGAAGTGTTTGAAG
CCATTGATCCTGAAAGTAAATCAATCACTTCGAAAATAATTGGCGGAGATATGTTAGAGC
TGTATGATTCCTTCACTTTTATTTCGTCAAGTGATCAGCAATGGGCTACATGGACATTTC
TGTACAAAAAGAAAACTGAAGAAACTCCGGAACCTCTTGCTCTATTGGGTTTTCTCATTG
GTGTGACAAAAGATATAGAGAATCACCTTCTCAAGTAATAATTATGAAAAACAAAATGTG
TGTATTTACACACATACATATATCATATAATAATATATATGTGTGTTTGTGTTATATTAG
CTAGCTAGTTTTAACTAGTTAGCTAGTGTGTGAAATTAGTTAAATTATGTTTGAAGAGTG
TATTACATATATGTACTCCCTCTCCTTCTAGGAATTGTATTTCCAATGTTTAATATATGT
AAGATATATTATGAATAATTGTAAGTTTGAAATTTACCTTTTTAAGTACTCTATTAACAA
AAACAATGTTATATTTAAAAGCATGTTATTCTCATTGTTTTTCTGCCAATTATATTTTGT
TAGGTTTCTTTAGTTAT