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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc00g027990.1.1
CDS Infomation

LOW QUALITY:cellulose synthase-like D6 (AHRD V3.3 *-* AT1G32180.2)
Sequence

ATGATGGACGGAGAATCTCCTCTAAGACATCCCAGAATCAGCCACGTGTCAAATTCCGGC
AGCGATTTCGGAAGCAGCTCTGATTACAACAAGTACCTCGTCCAGATCCCTCCGACGCCG
GACAACAATCCCGGTCCGGCGTCGCTTTCAATCGTTCTCCTGGACATCGATTCCAATCAG
GAGTCGGTTCCGTCCGTTTCCGGAGACATCGTTTCCGGTTCATCTGGTAAAGACAACGAA
CCGGATCTAACCGATGTGAGAATCAATGTAGGTGAAGAAGAAGAAGACGATACCTTGCTT
TCCAAGATATCTTATTCTCTTACTCGTGTCGTCAAAATCTCTCCGATCATCATCGCTCTT
TATCGGATTCTAATAGTTGTTCGAGTAGTATCTCTAGCTCTGTTTCTCTTCTGGAGAATC
AGAAACCCAAACAACAAAGCATTATGGTTATGGTTACTCTCTGTAATCTGTGAACTCTGG
TTTGCTTTCTCTTGGTTACTTGACCAAATCCCTAAGTTGTTTCCTGTGAACCACGCAACC
GATATCGAAGCCTTAAAGGCGACATTCGAAACGCCAAACCCGGATAACCCGACCGGGAAA
TCAGATCTTCCGGGGATTGATGTGTTTGTTTCAACGGCTGATGCAGAGAAAGAGCCTCCA
TTAGTTACAGCCAACACAATTCTTTCGATTTTATCTGTTGATTATCCTGTTGAGAAGCTC
TCTGTTTATATCTCAGATGATGGAGGATCGCTTGTTACGTTTGAAGCAATTGCTGAAGCG
GCTAGCTTTGCGAAAATATGGGTTCCGTTTTGCAGGAAACATAAGATAGAGCCGAGGAAT
CCGGAGAGTTACTTTGGTTTGAAGAGGGATCCTTATAAGGATAAGGTGAGACATGATTTT
GTTCGAGAGCGACGGTATGTTAAACGAGCTTATGATGAGTTTAAGGTTCGGGTTAATGCG
CTGCCTCATTCGATAAGAAGGAGATCGGATGCGTTTAATAGCAAAGAAGAGATTAAAGCT
TTAGAGAAATGGAAGCATTGGAAGGTGAAAGTTGAAGAGGATCAAATTAAGGAACCAAGG
CCTGCTTTAGTAGCTCCTAAAGCTACTTGGATGAGTGATGGAACTCATTGGCCCGGTACT
TGGGCTGTCTCTGGACCGCACCATTCGAGAGGCGATCACGCTAGTGTTATACAGGGTATT
TATACACGCACGGTTTGA

Peptide Sequence

PEP ID

Solyc00g027990.1.1
PEP Infomation

LOW QUALITY:cellulose synthase-like D6 (AHRD V3.3 *-* AT1G32180.2)
Sequence

MMDGESPLRHPRISHVSNSGSDFGSSSDYNKYLVQIPPTPDNNPGPASLSIVLLDIDSNQ
ESVPSVSGDIVSGSSGKDNEPDLTDVRINVGEEEEDDTLLSKISYSLTRVVKISPIIIAL
YRILIVVRVVSLALFLFWRIRNPNNKALWLWLLSVICELWFAFSWLLDQIPKLFPVNHAT
DIEALKATFETPNPDNPTGKSDLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKL
SVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYFGLKRDPYKDKVRHDF
VRERRYVKRAYDEFKVRVNALPHSIRRRSDAFNSKEEIKALEKWKHWKVKVEEDQIKEPR
PALVAPKATWMSDGTHWPGTWAVSGPHHSRGDHASVIQGIYTRTV*

Transcript Sequence

Transcript ID

Solyc00g027990.1.1
Transcript Infomation

LOW QUALITY:cellulose synthase-like D6 (AHRD V3.3 *-* AT1G32180.2)
Sequence

ATGATGGACGGAGAATCTCCTCTAAGACATCCCAGAATCAGCCACGTGTCAAATTCCGGC
AGCGATTTCGGAAGCAGCTCTGATTACAACAAGTACCTCGTCCAGATCCCTCCGACGCCG
GACAACAATCCCGGTCCGGCGTCGCTTTCAATCGTTCTCCTGGACATCGATTCCAATCAG
GAGTCGGTTCCGTCCGTTTCCGGAGACATCGTTTCCGGTTCATCTGGTAAAGACAACGAA
CCGGATCTAACCGATGTGAGAATCAATGTAGGTGAAGAAGAAGAAGACGATACCTTGCTT
TCCAAGATATCTTATTCTCTTACTCGTGTCGTCAAAATCTCTCCGATCATCATCGCTCTT
TATCGGATTCTAATAGTTGTTCGAGTAGTATCTCTAGCTCTGTTTCTCTTCTGGAGAATC
AGAAACCCAAACAACAAAGCATTATGGTTATGGTTACTCTCTGTAATCTGTGAACTCTGG
TTTGCTTTCTCTTGGTTACTTGACCAAATCCCTAAGTTGTTTCCTGTGAACCACGCAACC
GATATCGAAGCCTTAAAGGCGACATTCGAAACGCCAAACCCGGATAACCCGACCGGGAAA
TCAGATCTTCCGGGGATTGATGTGTTTGTTTCAACGGCTGATGCAGAGAAAGAGCCTCCA
TTAGTTACAGCCAACACAATTCTTTCGATTTTATCTGTTGATTATCCTGTTGAGAAGCTC
TCTGTTTATATCTCAGATGATGGAGGATCGCTTGTTACGTTTGAAGCAATTGCTGAAGCG
GCTAGCTTTGCGAAAATATGGGTTCCGTTTTGCAGGAAACATAAGATAGAGCCGAGGAAT
CCGGAGAGTTACTTTGGTTTGAAGAGGGATCCTTATAAGGATAAGGTGAGACATGATTTT
GTTCGAGAGCGACGGTATGTTAAACGAGCTTATGATGAGTTTAAGGTTCGGGTTAATGCG
CTGCCTCATTCGATAAGAAGGAGATCGGATGCGTTTAATAGCAAAGAAGAGATTAAAGCT
TTAGAGAAATGGAAGCATTGGAAGGTGAAAGTTGAAGAGGATCAAATTAAGGAACCAAGG
CCTGCTTTAGTAGCTCCTAAAGCTACTTGGATGAGTGATGGAACTCATTGGCCCGGTACT
TGGGCTGTCTCTGGACCGCACCATTCGAGAGGCGATCACGCTAGTGTTATACAGGGTATT
TATACACGCACGGTTTGA