Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc00g009100.3.1
CDS Infomation

30S ribosomal protein S1 (AHRD V3.3 *** A0A072VPA0_MEDTR)
Sequence

ATGCCACTTCTTCTTCTTCCATGTAAATCTTTCTCTATTTTCAATCCAATTTTGCCCCTC
AACACCTCTGTTATTTACAACACAGCTATCCAATTCTCAGGTTTTTCCCTTTCTCCAAAA
TACCCACTTCCTAGAACCCCAAAATCTTCCAAGAATTTGTCAATCCATTGGAATTATCAA
ATAAATTTGCCTACCCATGTCTTGTTTTGCTCTAAAAATGAAATCTTTGAAGAATTTAGG
ACTACCCAGTTGGCTGAATTGCCTGAAAGTGAAGAGCTTGAATTGCATAATAAGCCATAT
TTAAAGCAAATAGATAATGGGGTTGTCTCAGATGTAGAGGAGGACCAGAAAAAAGTTAGT
AAAGATGAAGTTTTGGAGCCATTTTATAAGTTATTTAAGCCTATAGAGTCTAATGAAGAA
GAAAGTGATATAGAACAGGAGGAAGAGGTTCATCCAGTTGTAGAAGAGAGTAAGAAGGTT
AGTGTAGAGTATTACGAACCGAAACCGGGTGATTTGGTGGTAGGTGTTGTGGTTTCGGGG
AATGAGAATAAGCTTGATGTGAGTATTGGTGCTGACCTATTGGGTACAATGTTAACTAAG
GATGTTTTGCCTTTGTATGACAAAGAGATAGGCTATTTGCTGTGTGATTTAGAGAAGGAT
GCTGAGGAATTCTTGGTGAGAGGGAAAATGGGAATTCTGAGCTATGATGATGCAGTGAGT
GGGGAATCAACGCCGGGGAAGCCCGTTGTGGAGCCTGGGACTGTTCTTTTTGCTGAGGTT
CTTGGAAGAACTCTCAGTGGTCGACCACTGCTTTCAACAAGAAGGCTCTTTAGACGCATT
GCTTGGCATCGAGTGAGGCAGATTAAACAACTAAATGAACCTATTGAGGTGAAGATAACA
GAGTGGAATATTGGTGGTCTTCTTACAAGAATAGAGGGCTTACGGGCTTTTCTTCCAAAG
GCTGAATTGATGAACAGAGTTAATAGCTACACCGAGCTGAAGGAGAATGTGGGGCGTCGA
ATTAATGTGCTTATTACCAGAATAAATGAAGAAACTAATGACTTGATACTTAGTGAGAAG
GAAGCTTGGCAAATGTTAAATCTGCAAGAGGGGACTCTTGTGGAAGGAACAGTGAAAAGA
CTTTTTCCCTTTGGCGCACAGATAAGGCTTGGTGAAACAAACCGAAGTGGCTTGCTACAC
ATCTCAAATGTCACCCAAGCCAAGGTTACTTCCATGAGTAACTTGTTAGCAGTTGATGAG
AAGGTGAAAGTTATGGTTGTGAAGTCAATGTTTCCTGATAAAATATCTCTCAGTATAGCA
AACCTTGAAAGCGAGCCAGGGTTATTTTTATCGGACAAGGAGAGAGTATTTTCTGAAGCA
AAACAGATGGCGAAGAAGTTCAGACAGAACCTACCAACTGTTTCAGCAACAAAGAAACCG
GAACCCCTTCCAACCGACAGGCTACCATTTGAAGATGAAGAAAATATGTATGCTAATTGG
AAATGGTTCAAGTTTGATAGGGATAATGTAAACATGGAATAA

Peptide Sequence

PEP ID

Solyc00g009100.3.1
PEP Infomation

30S ribosomal protein S1 (AHRD V3.3 *** A0A072VPA0_MEDTR)
Sequence

MPLLLLPCKSFSIFNPILPLNTSVIYNTAIQFSGFSLSPKYPLPRTPKSSKNLSIHWNYQ
INLPTHVLFCSKNEIFEEFRTTQLAELPESEELELHNKPYLKQIDNGVVSDVEEDQKKVS
KDEVLEPFYKLFKPIESNEEESDIEQEEEVHPVVEESKKVSVEYYEPKPGDLVVGVVVSG
NENKLDVSIGADLLGTMLTKDVLPLYDKEIGYLLCDLEKDAEEFLVRGKMGILSYDDAVS
GESTPGKPVVEPGTVLFAEVLGRTLSGRPLLSTRRLFRRIAWHRVRQIKQLNEPIEVKIT
EWNIGGLLTRIEGLRAFLPKAELMNRVNSYTELKENVGRRINVLITRINEETNDLILSEK
EAWQMLNLQEGTLVEGTVKRLFPFGAQIRLGETNRSGLLHISNVTQAKVTSMSNLLAVDE
KVKVMVVKSMFPDKISLSIANLESEPGLFLSDKERVFSEAKQMAKKFRQNLPTVSATKKP
EPLPTDRLPFEDEENMYANWKWFKFDRDNVNME*

Transcript Sequence

Transcript ID

Solyc00g009100.3.1
Transcript Infomation

30S ribosomal protein S1 (AHRD V3.3 *** A0A072VPA0_MEDTR)
Sequence

CAACATAATATGTTAGCGGCCCAACACTTCGTCGGCCCATTTGTGTGTCTGTGGAGTGTT
CAAAAATATCAAAGGCAAACTGTAAACAGATAACGAAACAAGCGGGAGCAGACATGCCAC
TTCTTCTTCTTCCATGTAAATCTTTCTCTATTTTCAATCCAATTTTGCCCCTCAACACCT
CTGTTATTTACAACACAGCTATCCAATTCTCAGGTTTTTCCCTTTCTCCAAAATACCCAC
TTCCTAGAACCCCAAAATCTTCCAAGAATTTGTCAATCCATTGGAATTATCAAATAAATT
TGCCTACCCATGTCTTGTTTTGCTCTAAAAATGAAATCTTTGAAGAATTTAGGACTACCC
AGTTGGCTGAATTGCCTGAAAGTGAAGAGCTTGAATTGCATAATAAGCCATATTTAAAGC
AAATAGATAATGGGGTTGTCTCAGATGTAGAGGAGGACCAGAAAAAAGTTAGTAAAGATG
AAGTTTTGGAGCCATTTTATAAGTTATTTAAGCCTATAGAGTCTAATGAAGAAGAAAGTG
ATATAGAACAGGAGGAAGAGGTTCATCCAGTTGTAGAAGAGAGTAAGAAGGTTAGTGTAG
AGTATTACGAACCGAAACCGGGTGATTTGGTGGTAGGTGTTGTGGTTTCGGGGAATGAGA
ATAAGCTTGATGTGAGTATTGGTGCTGACCTATTGGGTACAATGTTAACTAAGGATGTTT
TGCCTTTGTATGACAAAGAGATAGGCTATTTGCTGTGTGATTTAGAGAAGGATGCTGAGG
AATTCTTGGTGAGAGGGAAAATGGGAATTCTGAGCTATGATGATGCAGTGAGTGGGGAAT
CAACGCCGGGGAAGCCCGTTGTGGAGCCTGGGACTGTTCTTTTTGCTGAGGTTCTTGGAA
GAACTCTCAGTGGTCGACCACTGCTTTCAACAAGAAGGCTCTTTAGACGCATTGCTTGGC
ATCGAGTGAGGCAGATTAAACAACTAAATGAACCTATTGAGGTGAAGATAACAGAGTGGA
ATATTGGTGGTCTTCTTACAAGAATAGAGGGCTTACGGGCTTTTCTTCCAAAGGCTGAAT
TGATGAACAGAGTTAATAGCTACACCGAGCTGAAGGAGAATGTGGGGCGTCGAATTAATG
TGCTTATTACCAGAATAAATGAAGAAACTAATGACTTGATACTTAGTGAGAAGGAAGCTT
GGCAAATGTTAAATCTGCAAGAGGGGACTCTTGTGGAAGGAACAGTGAAAAGACTTTTTC
CCTTTGGCGCACAGATAAGGCTTGGTGAAACAAACCGAAGTGGCTTGCTACACATCTCAA
ATGTCACCCAAGCCAAGGTTACTTCCATGAGTAACTTGTTAGCAGTTGATGAGAAGGTGA
AAGTTATGGTTGTGAAGTCAATGTTTCCTGATAAAATATCTCTCAGTATAGCAAACCTTG
AAAGCGAGCCAGGGTTATTTTTATCGGACAAGGAGAGAGTATTTTCTGAAGCAAAACAGA
TGGCGAAGAAGTTCAGACAGAACCTACCAACTGTTTCAGCAACAAAGAAACCGGAACCCC
TTCCAACCGACAGGCTACCATTTGAAGATGAAGAAAATATGTATGCTAATTGGAAATGGT
TCAAGTTTGATAGGGATAATGTAAACATGGAATAACCCTCATCACTAAAAATGTATCGAA
CTGTATATCCTTTCGGCACGTCTTTAGGTCATTAGATAGCATCCATGACAAAGTACCATT
GTTCAAAATCCCAGTTATGTTCTTTACTGAACTGTGTAAAAACTAATAATTCACATTTTG
TTACTCAACTTTCAATTTTGACACAATTTTTAAGTTTCACATCCCTTTTTGACATATCAT
GCTTTCAT