Plant GARDEN
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TOP > About the Species(Brassica rapa subsp. pekinensis) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Brassica rapa

CDS Sequence

CDS ID

BraA09g040290.3C
CDS Infomation
Sequence

ATGACATCGCCTACTTCATCTGAGAGGTGGACCGATGGTCTTCAGTTCTCTTCCTTGTTA
TGGTCTCCCCCACGTGACCCTCAACAACATAAGGATCAAGTCGTTGCTTATGTCGAATAC
TTTGGTCAGTTCACATCAGAGCAATTCCCTGATGATATTGCTGAGTTGGTCCGTAATCAG
TATCCCTCAACTGAGAAGCGACTTTTGGATGATGTGTTGGCTATGTTTGTACTCCATCAT
CCTGAGCATGGTCATGCTGTCATCCTTCCGATTATCTCATGTCTCATCGATGGCACTCTA
GTGTACAGCAAGGAAGCTCATCCCTTCGCCTCTTTCATTTCTTTAGTTTCCCCAAATAGT
GAGAATGACTATTCAGAGCAATGGGCTTTGGCGTGCGGAGAAATCCTACGCATCTTGACT
CATTACAACCGTCCCATTTACAAGACGGAGCAGCAAAATGGAGAAACGGAGAGCAAAGCT
TCTACTAGTGGGTCTCCTACGCTTTCAGAGGCTAAGGCTGTATCACCAGGACAGCATGAA
AGGAAACCGCTAAGGCCTTTGTCTCCATGGATCAGTGATATACTACTCGCTGCTCCCCTT
GGTATTAGAAGTGACTACTTTCGTTGGTGTAGTGGTGTTATGGGTAAATATGCTGCTGGA
GAGCTCAAGCCACCTACCATTGCTACTCGAGGATCTGGTAAACATCCTCAATATATGCCT
TCGACACCAAGATGGGCGGTTGCTAATGGAGCTGGTGTCATACTGAGTGTTTGTGATGAT
GAAGTCGCTCGGTATGAGACTGCTACGTTAACAGCGGTTGCTGTCCCTGCACTTCTGCTT
CCTCCCCCAACGACATCCTTAGATGAGCATTTAGTTGCTGGCCTTCCAGCTCTTGAGCCT
TATGCACGTTTGTTTCACAGATATTATGCGATTGCAACTCCAAGTGCTACTCAGAGACTT
CTTCTTGGACTCTTGGAAGCACCACCGTCGTGGGCTCCAGATGCACTTGATGCTGCCGTA
CAGCTTGTGGAGCTTCTCCGAGCTGCTGAAGATTATGCATCTGGTGTAAGGCTACCAAGG
AACTGGATGCATTTGCACTTCTTGCGTGCAATAGGAATCGCCATGTCTATGAGGGCAGGC
GTTGCTGCTGACGCTGCAGCTGCTTTACTTTTCCGCATACTGTCGCAGCCGGCACTGCTT
TTTCCTCCGCTAAGCCAAGCTGAGGGAGTAGAAATCAAACACGCTCCTATTGGTGGCTAC
GGTTCAAATTACAGAAAGCAGATAGAAGTTCCTGCAGCAGAAGCAACCATTGAAGCCACT
GCACAAGGAATAGCCTCAATGCTTTGTGCTCACGGACCTGAAGTGGAGTGGAGGATCTGC
ACTATATGGGAAGCTGCCTATGGATTGATCCCTTTAAACTCCTCAGCCGTTGATCTCCCT
GAGATCATTGTCGCCACCCCACTGCAGCCTCCCATCTTGTCATGGAACCTATACATCCCA
CTCCTCAAAGTACTCGAGTATCTTCCACGTGGGAGTCCTTCCGAAGCATGCTTGATGAAG
ATATTCGTCGCCACGGTGGAAACAATCCTCAGCAGGACTTTCCCGCCAGAGACTTCTATC
AGGAAAGCTAGAGCGAGTTTAGCCACGAGATCATCAGCGACCAAAAACCTAGCTATGGCT
GAGCTTCGTGCTATGGTCCATGCTCTCTTCTTGGAATCATGCGCTGGCGTGGAGATAGCG
TCGCGCCTGCTTTTCGTTGTGTTGACTGTGTGTGTTAGCCATGAAGCGCAGTCTAGTGGG
AGCAAGAGACGGAGAAGCGAAGAAGATGCTACTGCAGAGGAGAATCAAGACAATCAAACT
AGTAACCGTAAAAGTAGGAACGTCAAGGGACAAGGACCTGTGGCGGCGTTTGATTCGTAC
GTTCTCGCTGCTGTCTGTGCTCTCGCCTGTGAGGTTCAGCTGTATCCTATGATCTCCGGA
GGAGGGAACTTCTCCAACTCTGCAGTGGCTGCAACCATTACAAAGTCTGTGAAGATAAAC
GGTTCATCTAACGAGTACGGAGCTGGGATTGACTCTGCAATCAAGCACACACGCCGCATC
TTAGCGATTCTCGAGGCGCTCTTTTCGTTGAAGCCATCTTCTGTGGGGACTCCGTGGAGT
TACAGCTCTAGCGAGATAGTTGCTGCGGCCATGGTCGCAGCTCACATCTCCGAACTGTTC
AGACGCTCAAAGGCCTTGACGCATGCCTTGTCTGGTTTGATGAGATGCAAATGGGACAAG
GAGATTCATAAGAGAGCGTCGTCTTTGTATAACCTCATCGATGTTCATAGCAAAGTTGTA
GCATCCATCGTCGACAAAGCTGAACCCTTAGAAGCGTACCTTAAGAACGCCCCGGTCCAG
AAGGATTCGCTGGCTTGTGTTAACTGGAAACAACAGAACAACACATCATCAGCAGCAGGG
TTTGGTACAGCGGCGGTGACGTCCACGTCACGTAATGAAATGGCTCCGAGAGGAGGTAAC
CATAAGTATGCTAGGCATTCAGATGAAGGCTCAGGGAGTAGATCGTCATCAGATAAGGGC
ATCAAAGATCTGCTGTTGGATGCTTCTGATCTAGCGAATTTCCTCACGGCTGATAGGCTA
GCAGGGTTTTACCGTGGTACGCAAGTTCTTTTGAGGTCGATACTTGCTGAGAAACCGGAG
CTTTCTTTCTCCGTTGTTTCGCTGTTGTGGCACAAACTGATCGCTTCTCCTGAGATCCAG
CCCACAGCCGAAAGCACCTCTGCTCAGCAAGGATGGAGACAGGTAGTTGATGCACTATGC
AATGTGGTATCTGCAACGCCAGCAAAAGCAGCTGCAGCCGTTGTTCTTCAGGCTGAGAGA
GAGTTGCAGCCTTGGATAGCCAAAGATGATGAAGAAGGTCAGAAAATGTGGAAAATAAAC
CAAAGGATAGTGAAAGTGATGGTGGAACTCATGAGGAATCATGACAGGCCTGAGTCACTG
GTGATTCTGGCAAGTGCATCTGATCTCCTTCTGAGAGCAACTGATGGAATGCTTGTTGAT
GGAGAAGCTTGTACATTACCTCAACTTGAGCTACTTGAAGCTACAGCAAGAGCAATACAG
CCAGTGTTAGCTTGGGGACCATCTGGACTAGCAGTAGTTGACGGCTTATCAAATCTATTG
AAGTGTCGTCTGCCGGCAACAATACGGTGCCTCTCACACCCAAGTGCACACGTACGTGCC
TTGAGCACATCAGTACTACGAGACATCATGAACCAAAGCGGCATAACCACCACCAAGGCA
ACTCCAAAACCGCCGCCAACAATAACAACCGAGAAGAACGGAACGGACAGCCCGTCGTAC
AGGTTCTTCAACGCGGCGGCAATAGACTGGAAAGCAGACATACAAAAGTGTTTGAACTGG
GAAGCGCACAGCTTGCTGTCGACGACAATGCCGACACAGTTTCTTGACACGGCGGCTCGG
GAATTAGGATGTACCATATCAATGTCGTCCCAATAA

Peptide Sequence

PEP ID

BraA09g040290.3C
PEP Infomation
Sequence

MTSPTSSERWTDGLQFSSLLWSPPRDPQQHKDQVVAYVEYFGQFTSEQFPDDIAELVRNQ
YPSTEKRLLDDVLAMFVLHHPEHGHAVILPIISCLIDGTLVYSKEAHPFASFISLVSPNS
ENDYSEQWALACGEILRILTHYNRPIYKTEQQNGETESKASTSGSPTLSEAKAVSPGQHE
RKPLRPLSPWISDILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTIATRGSGKHPQYMP
STPRWAVANGAGVILSVCDDEVARYETATLTAVAVPALLLPPPTTSLDEHLVAGLPALEP
YARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGVRLPR
NWMHLHFLRAIGIAMSMRAGVAADAAAALLFRILSQPALLFPPLSQAEGVEIKHAPIGGY
GSNYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLNSSAVDLP
EIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVETILSRTFPPETSI
RKARASLATRSSATKNLAMAELRAMVHALFLESCAGVEIASRLLFVVLTVCVSHEAQSSG
SKRRRSEEDATAEENQDNQTSNRKSRNVKGQGPVAAFDSYVLAAVCALACEVQLYPMISG
GGNFSNSAVAATITKSVKINGSSNEYGAGIDSAIKHTRRILAILEALFSLKPSSVGTPWS
YSSSEIVAAAMVAAHISELFRRSKALTHALSGLMRCKWDKEIHKRASSLYNLIDVHSKVV
ASIVDKAEPLEAYLKNAPVQKDSLACVNWKQQNNTSSAAGFGTAAVTSTSRNEMAPRGGN
HKYARHSDEGSGSRSSSDKGIKDLLLDASDLANFLTADRLAGFYRGTQVLLRSILAEKPE
LSFSVVSLLWHKLIASPEIQPTAESTSAQQGWRQVVDALCNVVSATPAKAAAAVVLQAER
ELQPWIAKDDEEGQKMWKINQRIVKVMVELMRNHDRPESLVILASASDLLLRATDGMLVD
GEACTLPQLELLEATARAIQPVLAWGPSGLAVVDGLSNLLKCRLPATIRCLSHPSAHVRA
LSTSVLRDIMNQSGITTTKATPKPPPTITTEKNGTDSPSYRFFNAAAIDWKADIQKCLNW
EAHSLLSTTMPTQFLDTAARELGCTISMSSQ*

Transcript Sequence

Gene sequence data has not been registered.