Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G67385.1
CDS Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:26884754-26887083 FORWARD LENGTH=1815 \| 201606
Sequence	ATGTCAGCAAAGAAGAAAGATCTTTTGTCCTCAGCTATGAAAAGAACCAGTGAATGGATT TCTTCTCAAGAAGTATCTAGTGATGTCACCGTTCATGTAGGAGAAGCTTCGTTTTCACTG CACAAGTTTCCACTCATGTCAAAATGTGGGTTTATCAAGAAACTTGTGTCGGAATCAAGC AAAGATTCAGATTCCACTGTTATCAAGATACCAGATATTCCAGGAGGCTCTGAAGCATTT GAGCTAGCGGCTAAGTTCTGCTACGGCATTAACTTTGATATGAGCACAGAGAACATTGCC ATGTTGCGATGTGCAGCGGAGTATCTAGAGATGACAGAGGAACACTCTGTGGAAAATCTC GTTGTAAGAGCCGAAGCTTACTTGAATGAAGTAGCTCTCAAGAGCTTATCGAGTTCGATC ACAGTCTTGCACAAATCAGAGAAGTTGTTGCCCATTGCTGAAAGAGTCAAACTTGTAAGC CGTTGCATCGATGCAATTGCTTATATGACTTGTCAAGAGAGCCATTTTTGCAGTCCTTCT TCAAGTAATAGCGGTAACAATGAGGTTGTGGTTCAGCAGCAGAGCAAGCAGCCTGTTGTT GATTGGTGGGCTGAAGACTTAACGGTTCTTAGGATTGATTCGTTTCAACGTGTCCTGATC GCGATGATGGCTAGAGGGTTTAAGCAGTATGGACTTGGTCCAGTGCTTATGCTCTATGCT CAGAAATCTCTTCGAGGGTTGGAAATTTTCGGGAAAGGAATGAAGAAGATTGAGCCAAAA CAAGAACACGAGAAAAGAGTGATTCTTGAAACAATCGTAAGCCTTCTTCCTCGAGAGAAA AATGCAATGTCGGTTAGCTTTCTCTCTATGCTTCTACGCGCAGCAATATTCCTCGAAACA ACGGTTGCTTGTAGACTTGACTTGGAAAACAGAATGGGATTACAATTAGGACAAGCCGTG CTCGATGATCTCTTGATTCCTTCTTATTCATTCACTGGAGATCACTCCATGTTTGATACT GACACTGTTCAACGCATTCTCATGAATTATCTCGAGTTTGAAGTCGAAGGAGTTCGCTTA AGCAATAATGGTGTTGATCTTGCTGGTGATATGGAACGTGTTGGTAAACTTTTGGAGAAT TATATGGCTGAAATTGCTTCTGATAGAAATGTGAGCTTGCAGAAATTCATCGGTTTAGCT GAACTTATCCCCGAACAGTCTAGGGTTACTGAAGATGGTATGTATCGAGCCGTCGACATC TACCTTAAGGCGCATCCCAATATGAGTGATGTAGAGAGGAAGAAAGTGTGCAGCTTAATG GACTGCCAAAAACTATCACGAGAAGCCTGCGCTCATGCAGCTCAGAATGATCGTCTTCCT GTTCAGACCATTGTTCAAGTCCTTTACTACGAGCAACAACGTCTACGAGGAGAAGTCACT AACGATTCAGATTCTCCAGCCCCACCACCACCACAACCAGCAGCTGTTCTTCCTCCCAAA CTTAGCTCCTACACCGACGAACTCTCCAAGCTTAAACGCGAAAATCAGGACTTGAAGCTC GAACTTCTCAAAATGAAAATGAAGCTAAAAGAGTTTGAGAAAGAGAGTGAGAAGAAAACA TCATCATCAACCATCAGCACGAATCCAAGTTCACCAATCTCAACTGCTTCCACGGGTAAG CCTCCATTGCCAAGAAAGTCATTCATAAACTCTGTTTCCAAGAAACTCGGTAAGCTAAAC CCTTTTAGCATCACACCATACAACGGTAGAGGCAGAACCAAACCACCAAAAGATCGGAGA CACTCTATTTCTTGA

Peptide Sequence

PEP ID	AT5G67385.1
PEP Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:26884754-26887083 FORWARD LENGTH=604 \| 201606
Sequence	MSAKKKDLLSSAMKRTSEWISSQEVSSDVTVHVGEASFSLHKFPLMSKCGFIKKLVSESS KDSDSTVIKIPDIPGGSEAFELAAKFCYGINFDMSTENIAMLRCAAEYLEMTEEHSVENL VVRAEAYLNEVALKSLSSSITVLHKSEKLLPIAERVKLVSRCIDAIAYMTCQESHFCSPS SSNSGNNEVVVQQQSKQPVVDWWAEDLTVLRIDSFQRVLIAMMARGFKQYGLGPVLMLYA QKSLRGLEIFGKGMKKIEPKQEHEKRVILETIVSLLPREKNAMSVSFLSMLLRAAIFLET TVACRLDLENRMGLQLGQAVLDDLLIPSYSFTGDHSMFDTDTVQRILMNYLEFEVEGVRL SNNGVDLAGDMERVGKLLENYMAEIASDRNVSLQKFIGLAELIPEQSRVTEDGMYRAVDI YLKAHPNMSDVERKKVCSLMDCQKLSREACAHAAQNDRLPVQTIVQVLYYEQQRLRGEVT NDSDSPAPPPPQPAAVLPPKLSSYTDELSKLKRENQDLKLELLKMKMKLKEFEKESEKKT SSSTISTNPSSPISTASTGKPPLPRKSFINSVSKKLGKLNPFSITPYNGRGRTKPPKDRR HSIS

Transcript Sequence

Transcript ID	AT5G67385.1
Transcript Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:26884203-26887430 FORWARD LENGTH=2713 \| 201606
Sequence	CAAATATCCCATCATTCATGTTCTGTCACAAAACCAAGATTCTGCAGCTTACTTATATAC TCCTTCCTTCTCTTCTTCTTACCACTAAACCAATTTATAGCTAATATTTGTAAGGGATAT ATACATTTGTGGAGAGGAATCAATACTCTCTTTTTTATAATTTGGAATTATTAGTTTGGT ACAAAGATGTGTGTCTGATCCACTTGGACTCTTCTCAATTTTTAAACCAATCCATTACCA CACACACTCCCTCCTTAGACTGACTCCCTATCTTGTACTCTCCATTAGAATGACATAACT ACCCTGTTCTGTCTTGTTCATTGCTTTTGGTGGTAAGGGTAGTTTATGGTTTTCTTTGTT TGGAGAATTTGAGTTCTCTTTTTCTGTTTGGTCACAATTATCAAAAGAGAGGAAGAAGCT CATTTTCTTGATCTTATTCTCTCTCTTTTAGTAGTACATTACGGCACGTCTTCTTCATGA GAAGGACTTGAAATAGTGTTCCATGGTGAATTTCTTGAGTGAAAAGAAACTGCGAGCTAA GTGTTCGTAATATGTCAGCAAAGAAGAAAGATCTTTTGTCCTCAGCTATGAAAAGAACCA GTGAATGGATTTCTTCTCAAGAAGTATCTAGTGATGTCACCGTTCATGTAGGAGAAGCTT CGTTTTCACTGCACAAGTTTCCACTCATGTCAAAATGTGGGTTTATCAAGAAACTTGTGT CGGAATCAAGCAAAGATTCAGATTCCACTGTTATCAAGATACCAGATATTCCAGGAGGCT CTGAAGCATTTGAGCTAGCGGCTAAGTTCTGCTACGGCATTAACTTTGATATGAGCACAG AGAACATTGCCATGTTGCGATGTGCAGCGGAGTATCTAGAGATGACAGAGGAACACTCTG TGGAAAATCTCGTTGTAAGAGCCGAAGCTTACTTGAATGAAGTAGCTCTCAAGAGCTTAT CGAGTTCGATCACAGTCTTGCACAAATCAGAGAAGTTGTTGCCCATTGCTGAAAGAGTCA AACTTGTAAGCCGTTGCATCGATGCAATTGCTTATATGACTTGTCAAGAGAGCCATTTTT GCAGTCCTTCTTCAAGTAATAGCGGTAACAATGAGGTTGTGGTTCAGCAGCAGAGCAAGC AGCCTGTTGTTGATTGGTGGGCTGAAGACTTAACGGTTCTTAGGATTGATTCGTTTCAAC GTGTCCTGATCGCGATGATGGCTAGAGGGTTTAAGCAGTATGGACTTGGTCCAGTGCTTA TGCTCTATGCTCAGAAATCTCTTCGAGGGTTGGAAATTTTCGGGAAAGGAATGAAGAAGA TTGAGCCAAAACAAGAACACGAGAAAAGAGTGATTCTTGAAACAATCGTAAGCCTTCTTC CTCGAGAGAAAAATGCAATGTCGGTTAGCTTTCTCTCTATGCTTCTACGCGCAGCAATAT TCCTCGAAACAACGGTTGCTTGTAGACTTGACTTGGAAAACAGAATGGGATTACAATTAG GACAAGCCGTGCTCGATGATCTCTTGATTCCTTCTTATTCATTCACTGGAGATCACTCCA TGTTTGATACTGACACTGTTCAACGCATTCTCATGAATTATCTCGAGTTTGAAGTCGAAG GAGTTCGCTTAAGCAATAATGGTGTTGATCTTGCTGGTGATATGGAACGTGTTGGTAAAC TTTTGGAGAATTATATGGCTGAAATTGCTTCTGATAGAAATGTGAGCTTGCAGAAATTCA TCGGTTTAGCTGAACTTATCCCCGAACAGTCTAGGGTTACTGAAGATGGTATGTATCGAG CCGTCGACATCTACCTTAAGGCGCATCCCAATATGAGTGATGTAGAGAGGAAGAAAGTGT GCAGCTTAATGGACTGCCAAAAACTATCACGAGAAGCCTGCGCTCATGCAGCTCAGAATG ATCGTCTTCCTGTTCAGACCATTGTTCAAGTCCTTTACTACGAGCAACAACGTCTACGAG GAGAAGTCACTAACGATTCAGATTCTCCAGCCCCACCACCACCACAACCAGCAGCTGTTC TTCCTCCCAAACTTAGCTCCTACACCGACGAACTCTCCAAGCTTAAACGCGAAAATCAGG ACTTGAAGCTCGAACTTCTCAAAATGAAAATGAAGCTAAAAGAGTTTGAGAAAGAGAGTG AGAAGAAAACATCATCATCAACCATCAGCACGAATCCAAGTTCACCAATCTCAACTGCTT CCACGGGTAAGCCTCCATTGCCAAGAAAGTCATTCATAAACTCTGTTTCCAAGAAACTCG GTAAGCTAAACCCTTTTAGCATCACACCATACAACGGTAGAGGCAGAACCAAACCACCAA AAGATCGGAGACACTCTATTTCTTGAATACCATATCTATATACACATATATAAAGTTGAA TTTTTGTTGGAACTTTTAAGTTCTGATTCAAGGGGTTTTCTTCCTGCTTATCAACATTTG ATATTTTGGTGTGTTTATGATGTATAAACTTTATCTGTGGAACTTATCACTTATGAGTAT AGATCATAGATTCAGAGAATTTGGGATTCTAAAGCTGATGATGATCAAACCAGATCGTGG GGTCATGTATTAAAAAATAATAGTAACTTTTCAATTTTAGTTCTTTGGAAATTAGGGAAA GAAATATATATAAAAATCAGAACTAGAACAGGGGAAGTAGGTGATTCTCATGAAGCCTGA AGGGAACATGACA