Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G62630.1
CDS Infomation	\| hipl2 protein precursor \| Chr5:25143719-25146390 REVERSE LENGTH=2091 \| 201606
Sequence	ATGGCAAAGACGAATCAAGCCATCACTATCTGTTCCCTTCTTCTGCTTCTTCTACTCTCT GAAACAACTTCTCACCTTCTTTGCTCAGATTCAAAGACTCCAGTCAACAACAACGAGACA CTCCAGTTCTGCGATTCCTACAAAGAAAGATCTTGCTGCAATTCTAAAGATGATCTTCAA TTACAGAATCGCTTCAACTCCATGAACATCTCTGACTCTAATTGTTCTTCTCTTCTCAAA TCCATTCTCTGTTCTAAATGTGATGAATTCTCAGGACAATTGTTTGGTGATGATGATAGT TCTCTAGTTCCAATTCTCTGCAACTCAACATCACAAGACTTATGTTCAAAACTTTGGGAT TCATGTCAGAACATTTCCATTGTTTCTTCTCCTTTTAGTCCCACTCTACTTGGTGGTGCT ACTTCGCCTTCAACTTCATCAAATTCATCGACATTAACCGATCTTTGGAAATCCCAAACC GAATTCTGTACAGCCTTTGGTGGACCATCTCAAACCAACAACAACAAAACCAAATGCTTC AATGGTGAACCGGTTAACAGAGACACTAGTGATGATGATGAGGATGATGTTAAGACACCT AAAGGAATATGTCTTGAGAAGATAGGAACTGGTTCTTACCTTAACATGGTCGCTCATCCT GATGGTTCGAACCGGGCCTTTTTCTCTAACCAACCTGGTAAGATTTGGTTAGGTACAATA CCGGATCAAGACTCAGGTAAACCGATGGAAATCGATGAATCAACTCCTTTTGTTGATATT ACCGATCAAGTTAGTTTCGATACGCAGTTTGGTATGATGGGAATGGCGTTTCATCCTAAG TTCGCAGAGAACGGGCGGTTTTTCGCGTCTTTTAACTGCGATAAAGTCAAATCTCCTGGA TGCTCTGGTCGTTGTGCTTGCAATTCTGATGTTAACTGTGATCCTTCGAAGCTTCCTAAA GATGATGGCACGACGCCTTGTCGTTATCAGACCGTTGTGTCCGAGTATACCGCAAACGGT ACTTCCTCGAGCCCTTCAACGGCAAAGATTGGTAAAGCATCTGAAGTGAGGAGGATTTTC ACTATGGGACTTCCGTATTCTTCATCTCACGGTGGTCAGATTCTCTTTGGACCTGACGGG TATTTGTATCTCATGACTGGTGACGGAGGAGGAGTTTCAGATACTCACAACTTTGCACAG AACAAGAAGTCGTTGCTTGGCAAAATCTTGAGGCTTGATGTTGATGTTATGCCAAGCGTA TCTGAAATCTCTAAGCTTGGTTTATGGGGAAACTACTCTATACCAAAAAACAATCCTTTC CAAGGAAATGAAAATGAGCAGCCTGAGATTTGGGCTTTAGGGCTACGAAATCCATGGCGC TGCAGCTTCGATTCCGAAAGACCAGATTACTTCTTGTGCGCAGATGTCGGAAAGGATACA TATGAAGAAGTTGATATCATAACAATGGGTGGAAACTATGGCTGGAGAACTTACGAAGGA CCATATGTTTTCTCACCGTTATCGCCTTTTGGAGAAAATGTTTCCTCGGATTCAAACCTG ACATTCCCCATTCTCGGTTACAACCACTCTGAAGTGAACAAACATGAAGGATCTGCTTCC ATCATTGGAGGTTACTTTTATCGATCCAACACTGATCCTTGCTCTTATGGAACGTACTTG TATGCAGATCTTTATGCAAACGCAATGTGGGCAGCGATCGAATCACCAGAAGATAGTGGA AACTTCACGGACTCTCTAATACCGTTTAGTTGCAGCAAGGATTCACCGATGAAGTGTACC GCAGCTCCAGGAGGAGCTAGCTCAGGACCTGCTCTTGGTTACATTTACTCATTTGGACAA GACAATAACAAGGACATACATTTACTCACGAGCTCTGGTGTGTATCGAATTGTTCGTCCT AGTCGCTGTAACTTAGCTTGCTCCAAGGAAAACACCACCGCTTCTGCCGGAAAACAGAAC CCTGCTGGTTCTGCTCCTCCTCAGCCTTTACCTTCTTCTGCAAGAAAGCTCTGTTTCTCT GTGTTTTTGTTATTGTCGTTGTTGATGATGTTTTTAACGTTGTTAGATTAG

Peptide Sequence

PEP ID	AT5G62630.1
PEP Infomation	\| hipl2 protein precursor \| Chr5:25143719-25146390 REVERSE LENGTH=696 \| 201606
Sequence	MAKTNQAITICSLLLLLLLSETTSHLLCSDSKTPVNNNETLQFCDSYKERSCCNSKDDLQ LQNRFNSMNISDSNCSSLLKSILCSKCDEFSGQLFGDDDSSLVPILCNSTSQDLCSKLWD SCQNISIVSSPFSPTLLGGATSPSTSSNSSTLTDLWKSQTEFCTAFGGPSQTNNNKTKCF NGEPVNRDTSDDDEDDVKTPKGICLEKIGTGSYLNMVAHPDGSNRAFFSNQPGKIWLGTI PDQDSGKPMEIDESTPFVDITDQVSFDTQFGMMGMAFHPKFAENGRFFASFNCDKVKSPG CSGRCACNSDVNCDPSKLPKDDGTTPCRYQTVVSEYTANGTSSSPSTAKIGKASEVRRIF TMGLPYSSSHGGQILFGPDGYLYLMTGDGGGVSDTHNFAQNKKSLLGKILRLDVDVMPSV SEISKLGLWGNYSIPKNNPFQGNENEQPEIWALGLRNPWRCSFDSERPDYFLCADVGKDT YEEVDIITMGGNYGWRTYEGPYVFSPLSPFGENVSSDSNLTFPILGYNHSEVNKHEGSAS IIGGYFYRSNTDPCSYGTYLYADLYANAMWAAIESPEDSGNFTDSLIPFSCSKDSPMKCT AAPGGASSGPALGYIYSFGQDNNKDIHLLTSSGVYRIVRPSRCNLACSKENTTASAGKQN PAGSAPPQPLPSSARKLCFSVFLLLSLLMMFLTLLD

Transcript Sequence

Transcript ID	AT5G62630.1
Transcript Infomation	\| hipl2 protein precursor \| Chr5:25143518-25146587 REVERSE LENGTH=2489 \| 201606
Sequence	CCAAAGAATTTATTCATTTCTCTCTCAAGTTTTCTCTAATATTTTGACAAAATTTTCAAC GACTTATGTCGTATTTAGACACAACTATGTTACTACCACATATACACATATATACTATTT AGACACATATACTATATAGCTTTGAGTCTCCTGTGTGAGAGAGAGAGAGAGAATTGTGTT GTTGCATAGTTCCAATAATGGCAAAGACGAATCAAGCCATCACTATCTGTTCCCTTCTTC TGCTTCTTCTACTCTCTGAAACAACTTCTCACCTTCTTTGCTCAGATTCAAAGACTCCAG TCAACAACAACGAGACACTCCAGTTCTGCGATTCCTACAAAGAAAGATCTTGCTGCAATT CTAAAGATGATCTTCAATTACAGAATCGCTTCAACTCCATGAACATCTCTGACTCTAATT GTTCTTCTCTTCTCAAATCCATTCTCTGTTCTAAATGTGATGAATTCTCAGGACAATTGT TTGGTGATGATGATAGTTCTCTAGTTCCAATTCTCTGCAACTCAACATCACAAGACTTAT GTTCAAAACTTTGGGATTCATGTCAGAACATTTCCATTGTTTCTTCTCCTTTTAGTCCCA CTCTACTTGGTGGTGCTACTTCGCCTTCAACTTCATCAAATTCATCGACATTAACCGATC TTTGGAAATCCCAAACCGAATTCTGTACAGCCTTTGGTGGACCATCTCAAACCAACAACA ACAAAACCAAATGCTTCAATGGTGAACCGGTTAACAGAGACACTAGTGATGATGATGAGG ATGATGTTAAGACACCTAAAGGAATATGTCTTGAGAAGATAGGAACTGGTTCTTACCTTA ACATGGTCGCTCATCCTGATGGTTCGAACCGGGCCTTTTTCTCTAACCAACCTGGTAAGA TTTGGTTAGGTACAATACCGGATCAAGACTCAGGTAAACCGATGGAAATCGATGAATCAA CTCCTTTTGTTGATATTACCGATCAAGTTAGTTTCGATACGCAGTTTGGTATGATGGGAA TGGCGTTTCATCCTAAGTTCGCAGAGAACGGGCGGTTTTTCGCGTCTTTTAACTGCGATA AAGTCAAATCTCCTGGATGCTCTGGTCGTTGTGCTTGCAATTCTGATGTTAACTGTGATC CTTCGAAGCTTCCTAAAGATGATGGCACGACGCCTTGTCGTTATCAGACCGTTGTGTCCG AGTATACCGCAAACGGTACTTCCTCGAGCCCTTCAACGGCAAAGATTGGTAAAGCATCTG AAGTGAGGAGGATTTTCACTATGGGACTTCCGTATTCTTCATCTCACGGTGGTCAGATTC TCTTTGGACCTGACGGGTATTTGTATCTCATGACTGGTGACGGAGGAGGAGTTTCAGATA CTCACAACTTTGCACAGAACAAGAAGTCGTTGCTTGGCAAAATCTTGAGGCTTGATGTTG ATGTTATGCCAAGCGTATCTGAAATCTCTAAGCTTGGTTTATGGGGAAACTACTCTATAC CAAAAAACAATCCTTTCCAAGGAAATGAAAATGAGCAGCCTGAGATTTGGGCTTTAGGGC TACGAAATCCATGGCGCTGCAGCTTCGATTCCGAAAGACCAGATTACTTCTTGTGCGCAG ATGTCGGAAAGGATACATATGAAGAAGTTGATATCATAACAATGGGTGGAAACTATGGCT GGAGAACTTACGAAGGACCATATGTTTTCTCACCGTTATCGCCTTTTGGAGAAAATGTTT CCTCGGATTCAAACCTGACATTCCCCATTCTCGGTTACAACCACTCTGAAGTGAACAAAC ATGAAGGATCTGCTTCCATCATTGGAGGTTACTTTTATCGATCCAACACTGATCCTTGCT CTTATGGAACGTACTTGTATGCAGATCTTTATGCAAACGCAATGTGGGCAGCGATCGAAT CACCAGAAGATAGTGGAAACTTCACGGACTCTCTAATACCGTTTAGTTGCAGCAAGGATT CACCGATGAAGTGTACCGCAGCTCCAGGAGGAGCTAGCTCAGGACCTGCTCTTGGTTACA TTTACTCATTTGGACAAGACAATAACAAGGACATACATTTACTCACGAGCTCTGGTGTGT ATCGAATTGTTCGTCCTAGTCGCTGTAACTTAGCTTGCTCCAAGGAAAACACCACCGCTT CTGCCGGAAAACAGAACCCTGCTGGTTCTGCTCCTCCTCAGCCTTTACCTTCTTCTGCAA GAAAGCTCTGTTTCTCTGTGTTTTTGTTATTGTCGTTGTTGATGATGTTTTTAACGTTGT TAGATTAGAATGATGATTGTTTCAGACTCTGTTTTGTAACAGTTCTTATGGATGTTATTC AAAAACTATTTTGTGATTGCTTATATTAGACGAACTCATATGTAATAAACCATTAAGTTT GAGTTCTTTTGTATTGTTATGTCGCAGCAATGTGATCAATCTCCCAGGAACAATCGTTTT GCTGGTAGATATTTCAGTTAGCCGACCAA