Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G62410.1
CDS Infomation	\| structural maintenance of chromosomes 2 \| Chr5:25056308-25062436 FORWARD LENGTH=3528 \| 201606
Sequence	ATGCATATAAAGGAGATATGCTTGGAGGGTTTTAAATCATACGCGACGAGGACGGTGGTT TCTGGTTTCGATCCACATTTCAACGCGATAACGGGTCTGAATGGTTCGGGAAAATCCAAC ATCCTCGATTCCATCTGTTTCGTTCTGGGTATCACCAATCTTCAGCAAGTTCGAGCTGCT AATCTTCAGGAACTCGTCTATAAGCAAGGCCAAGCTGGGATTACTAAGGCGACTGTCTCG GTTACCTTTGACAATTCCGAGAGACACAGAAGCCCTCTCGGCTACGAAGAACATCCAGAG ATTACTGTGACTAGACAAATTGTAGTTGGTGGAAGGAACAAGTATTTGATAAATGGGAAG CTAGCACAACCAAGTCAAGTTCAGAATCTATTTCACTCGGTGCAGCTTAATGTCAACAAT CCACACTTTCTCATCATGCAAGGGCGTATCACCAAAGTTTTGAATATGAAGCCTCCGGAG ATATTGTCCATGCTTGAAGAAGCTGCTGGAACAAGGATGTATGAAAACAAGAAAGAGGCT GCATTGAAAACGCTTGAAAAAAAGCAGACCAAGGTTGATGAGATTAATAAGCTTCTTGAT CATGAAATATTGCCGGCTCTCGAGAAGTTGAGGAAAGAAAAATCACAGTACATGCAGTGG GCTAATGGTAACGCGGAGCTAGATCGACTAAGGAGATTCTGTATTGCCTTTGAATATGTT CAAGCGGAGAAGATTAGAGACAATGCTGTTCTTGGAGTTGGAGAAATGAAGGCGAAGCTC GGGAAGATTGACGCGGAAACAGAAAAGACACAGGAAGAAATACAGGAATTTGAGAAACAG ATAAAAGCTCTGACTCAGGCAAAGGAAGCCAGTATGGGGGGAGAAGTAAAAACTCTGTCA GAAAAAGTGGATTCACTGGCTCAAGAAATGACACGTGAGTCATCTAAACTTAATAACAAG GAGGACACCCTTCTGGGAGAAAAAGAGAATGTTGAAAAGATTGTTCACAGTATAGAAGAT TTAAAGAAATCCGTAAAGGAGAGAGCCGCTGCTGTGAAGAAGTCTGAGGAAGGAGCGGCA GACCTAAAACAAAGATTCCAGGAACTCTCCACCACATTGGAAGAGTGTGAAAAGGAACAC CAGGGCGTACTAGCTGGTAAGAGTAGTGGAGATGAAGAGAAATGCTTAGAAGATCAACTA CGGGATGCAAAGATTGCTGTTGGAACAGCTGGAACAGAGTTGAAACAGCTAAAAACCAAA ATAGAACACTGTGAAAAGGAGCTAAAGGAGAGAAAGTCTCAGTTAATGTCAAAACTTGAA GAAGCCATTGAAGTGGAGAATGAACTTGGAGCTAGGAAAAATGATGTGGAACATGTAAAA AAGGCACTTGAATCTATTCCTTATAACGAGGGTCAAATGGAAGCTTTGGAGAAGGACCGT GGAGCCGAACTTGAAGTTGTGCAGAGGCTGGAAGATAAAGTGCGTGGCTTATCAGCTCAA TTAGCAAATTTTCAGTTTACATACAGCGATCCTGTGAGGAACTTTGACCGATCTAAGGTG AAAGGTGTGGTCGCAAAACTAATAAAAGTAAAAGATAGGTCCTCAATGACAGCGTTGGAG GTTACTGCTGGTGGCAAGTTGTATGATGTTGTTGTAGACTCAGAAGATACTGGAAAACAG CTCCTTCAAAACGGTGCTCTTAGGAGAAGAGTTACAATTATACCTCTGAACAAAATCCAA TCTTACGTTGTTCAGCCTAGAGTGCAGCAAGCGACTGCTAGATTGGTTGGAAAGGATAAT GCAGAACTGGCACTTTCCTTAGTCGGTTATAGTGATGAATTAAAGAATGCCATGGAATAT GTTTTTGGCTCCACTTTTGTTTGCAAAACTACTGATGTAGCAAAGGAAGTTGCTTTTAAT CGGGATATTCGGACTCCAAGTGTCACACTTGAAGGTGACATTTTCCAGCCAAGTGGTCTT CTTACTGGTGGGAGTCGCAAGGGTGGAGGTGATCGCCTTAGGAAACTTCATGACCTGGCA GAAGCTGAATCAGAATTACAAGGACACCAAAAAAGGTTGGCTGACGTTGAATCACAGATC AAAGAGCTTCAGCCTCTTCAAATGAAATTCACAGATGTTTATGCACAGTTGGAGCTGAAG ACGTATGACTTGTCCTTATTTTTGAAGAGGGCTGAACAAAATGAGCATCACAAGCTTGGC GAAGCTGTAAAAAAACTTGAAGAAGAGCTTGAAGAAGCGAAATCCCAAATCAAAGAGAAG GAACTTGCTTATAAAAATTGTTTTGATGCTGTTTCCAAACTAGAGAATTCCATCAAAGAC CATGACAAAAACAGAGAAGGAAGACTTAAGGACTTGGAAAAAAATATTAAAACCATCAAA GCTCAAATGCAGGCAGCTTCCAAAGATTTAAAGAGTCATGAAAATGAAAAAGAGAAGCTT GTGATGGAGGAAGAAGCAATGAAGCAAGAACAATCGTCCTTGGAGAGCCACTTAACTTCA TTGGAAACCCAAATCAGCACTCTGACTTCGGAAGTAGACGAGCAGCGAGCCAAGGTTGAT GCCTTACAGAAGATTCATGATGAGTCTCTTGCCGAGCTCAAGTTGATACATGCAAAGATG AAGGAATGTGATACACAGATAAGTGGTTTTGTCACTGACCAGGAAAAGTGTCTGCAGAAG CTTAGTGACATGAAGCTTGAGAGAAAGAAATTGGAAAATGAGGTCGTAAGGATGGAAACG GATCACAAGGACTGTTCCGTGAAAGTAGACAAACTTGTTGAGAAGCATACATGGATAGCA TCTGAAAAGCAACTTTTTGGGAAAGGAGGGACAGATTATGATTTTGAATCTTGTGATCCG TATGTGGCCAGAGAAAAACTTGAAAAGCTCCAATCAGATCAATCAGGCTTGGAAAAAAGA GTGAACAAGAAGGTTATGGCTATGTTTGAGAAAGCAGAAGATGAATACAATGCTCTGATA TCGAAAAAAAATACTATCGAGAATGACAAATCAAAAATCACGAAAGTGATCGAGGAGCTT GATGAGAAGAAAAAAGAAACCCTGAAAGTTACTTGGGTTAAAGTTAACCAGGATTTCGGA TCAATCTTTTCAACTCTACTACCTGGCACCATGGCAAAACTAGAACCTCCTGAAGACGGT AACTTCCTTGATGGTCTTGAGGTGCGTGTTGCCTTTGGAAAAGTCTGGAAGCAGTCTTTA TCAGAACTCAGTGGAGGGCAAAGATCTCTTCTTGCGCTATCACTAATATTGGCATTGCTT CTCTTCAAACCGGCTCCTCTTTATATATTAGATGAGGTTGATGCAGCTCTTGATCTCAGT CACACACAGAACATAGGAAGAATGATAAGAGCTCATTTCCCTCACTCGCAGTTTATCGTG GTTTCGCTGAAAGAAGGAATGTTCAACAATGCCAATGTTCTTTTCCGGACAAAGTTCGTT GATGGAGTTTCAACAGTCCAAAGGACAGTAACAAAGCAGACCAAGTGA

Peptide Sequence

PEP ID	AT5G62410.1
PEP Infomation	\| structural maintenance of chromosomes 2 \| Chr5:25056308-25062436 FORWARD LENGTH=1175 \| 201606
Sequence	MHIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA NLQELVYKQGQAGITKATVSVTFDNSERHRSPLGYEEHPEITVTRQIVVGGRNKYLINGK LAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYENKKEA ALKTLEKKQTKVDEINKLLDHEILPALEKLRKEKSQYMQWANGNAELDRLRRFCIAFEYV QAEKIRDNAVLGVGEMKAKLGKIDAETEKTQEEIQEFEKQIKALTQAKEASMGGEVKTLS EKVDSLAQEMTRESSKLNNKEDTLLGEKENVEKIVHSIEDLKKSVKERAAAVKKSEEGAA DLKQRFQELSTTLEECEKEHQGVLAGKSSGDEEKCLEDQLRDAKIAVGTAGTELKQLKTK IEHCEKELKERKSQLMSKLEEAIEVENELGARKNDVEHVKKALESIPYNEGQMEALEKDR GAELEVVQRLEDKVRGLSAQLANFQFTYSDPVRNFDRSKVKGVVAKLIKVKDRSSMTALE VTAGGKLYDVVVDSEDTGKQLLQNGALRRRVTIIPLNKIQSYVVQPRVQQATARLVGKDN AELALSLVGYSDELKNAMEYVFGSTFVCKTTDVAKEVAFNRDIRTPSVTLEGDIFQPSGL LTGGSRKGGGDRLRKLHDLAEAESELQGHQKRLADVESQIKELQPLQMKFTDVYAQLELK TYDLSLFLKRAEQNEHHKLGEAVKKLEEELEEAKSQIKEKELAYKNCFDAVSKLENSIKD HDKNREGRLKDLEKNIKTIKAQMQAASKDLKSHENEKEKLVMEEEAMKQEQSSLESHLTS LETQISTLTSEVDEQRAKVDALQKIHDESLAELKLIHAKMKECDTQISGFVTDQEKCLQK LSDMKLERKKLENEVVRMETDHKDCSVKVDKLVEKHTWIASEKQLFGKGGTDYDFESCDP YVAREKLEKLQSDQSGLEKRVNKKVMAMFEKAEDEYNALISKKNTIENDKSKITKVIEEL DEKKKETLKVTWVKVNQDFGSIFSTLLPGTMAKLEPPEDGNFLDGLEVRVAFGKVWKQSL SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIRAHFPHSQFIV VSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQTK

Transcript Sequence

Transcript ID	AT5G62410.1
Transcript Infomation	\| structural maintenance of chromosomes 2 \| Chr5:25056025-25062670 FORWARD LENGTH=4045 \| 201606
Sequence	CCAAAGTTCACTTTCCCGCTCCTTGTGTTCCCAAATCGAAATGCCCTTGTTTTCAAAATC CCAAATCGACTCCTAATTATCTTCAACTAAAAAACCAAAATTGACTTCAGATTCGCCTTC TTCTTCTCTTGCAACGTTTCAATTTCATGTGCCTTCGACCTTAGATTCCAATTTTGAATT CGAATTTCTGGGGTTTCGATTGAGCTCTTCTCGCTTTTTTCTAGGGTTTTGTCGCATATG CTGCGAGTGTGAGTGGAAATTTGGGGGAAGAAGAAGAAGGAAGATGCATATAAAGGAGAT ATGCTTGGAGGGTTTTAAATCATACGCGACGAGGACGGTGGTTTCTGGTTTCGATCCACA TTTCAACGCGATAACGGGTCTGAATGGTTCGGGAAAATCCAACATCCTCGATTCCATCTG TTTCGTTCTGGGTATCACCAATCTTCAGCAAGTTCGAGCTGCTAATCTTCAGGAACTCGT CTATAAGCAAGGCCAAGCTGGGATTACTAAGGCGACTGTCTCGGTTACCTTTGACAATTC CGAGAGACACAGAAGCCCTCTCGGCTACGAAGAACATCCAGAGATTACTGTGACTAGACA AATTGTAGTTGGTGGAAGGAACAAGTATTTGATAAATGGGAAGCTAGCACAACCAAGTCA AGTTCAGAATCTATTTCACTCGGTGCAGCTTAATGTCAACAATCCACACTTTCTCATCAT GCAAGGGCGTATCACCAAAGTTTTGAATATGAAGCCTCCGGAGATATTGTCCATGCTTGA AGAAGCTGCTGGAACAAGGATGTATGAAAACAAGAAAGAGGCTGCATTGAAAACGCTTGA AAAAAAGCAGACCAAGGTTGATGAGATTAATAAGCTTCTTGATCATGAAATATTGCCGGC TCTCGAGAAGTTGAGGAAAGAAAAATCACAGTACATGCAGTGGGCTAATGGTAACGCGGA GCTAGATCGACTAAGGAGATTCTGTATTGCCTTTGAATATGTTCAAGCGGAGAAGATTAG AGACAATGCTGTTCTTGGAGTTGGAGAAATGAAGGCGAAGCTCGGGAAGATTGACGCGGA AACAGAAAAGACACAGGAAGAAATACAGGAATTTGAGAAACAGATAAAAGCTCTGACTCA GGCAAAGGAAGCCAGTATGGGGGGAGAAGTAAAAACTCTGTCAGAAAAAGTGGATTCACT GGCTCAAGAAATGACACGTGAGTCATCTAAACTTAATAACAAGGAGGACACCCTTCTGGG AGAAAAAGAGAATGTTGAAAAGATTGTTCACAGTATAGAAGATTTAAAGAAATCCGTAAA GGAGAGAGCCGCTGCTGTGAAGAAGTCTGAGGAAGGAGCGGCAGACCTAAAACAAAGATT CCAGGAACTCTCCACCACATTGGAAGAGTGTGAAAAGGAACACCAGGGCGTACTAGCTGG TAAGAGTAGTGGAGATGAAGAGAAATGCTTAGAAGATCAACTACGGGATGCAAAGATTGC TGTTGGAACAGCTGGAACAGAGTTGAAACAGCTAAAAACCAAAATAGAACACTGTGAAAA GGAGCTAAAGGAGAGAAAGTCTCAGTTAATGTCAAAACTTGAAGAAGCCATTGAAGTGGA GAATGAACTTGGAGCTAGGAAAAATGATGTGGAACATGTAAAAAAGGCACTTGAATCTAT TCCTTATAACGAGGGTCAAATGGAAGCTTTGGAGAAGGACCGTGGAGCCGAACTTGAAGT TGTGCAGAGGCTGGAAGATAAAGTGCGTGGCTTATCAGCTCAATTAGCAAATTTTCAGTT TACATACAGCGATCCTGTGAGGAACTTTGACCGATCTAAGGTGAAAGGTGTGGTCGCAAA ACTAATAAAAGTAAAAGATAGGTCCTCAATGACAGCGTTGGAGGTTACTGCTGGTGGCAA GTTGTATGATGTTGTTGTAGACTCAGAAGATACTGGAAAACAGCTCCTTCAAAACGGTGC TCTTAGGAGAAGAGTTACAATTATACCTCTGAACAAAATCCAATCTTACGTTGTTCAGCC TAGAGTGCAGCAAGCGACTGCTAGATTGGTTGGAAAGGATAATGCAGAACTGGCACTTTC CTTAGTCGGTTATAGTGATGAATTAAAGAATGCCATGGAATATGTTTTTGGCTCCACTTT TGTTTGCAAAACTACTGATGTAGCAAAGGAAGTTGCTTTTAATCGGGATATTCGGACTCC AAGTGTCACACTTGAAGGTGACATTTTCCAGCCAAGTGGTCTTCTTACTGGTGGGAGTCG CAAGGGTGGAGGTGATCGCCTTAGGAAACTTCATGACCTGGCAGAAGCTGAATCAGAATT ACAAGGACACCAAAAAAGGTTGGCTGACGTTGAATCACAGATCAAAGAGCTTCAGCCTCT TCAAATGAAATTCACAGATGTTTATGCACAGTTGGAGCTGAAGACGTATGACTTGTCCTT ATTTTTGAAGAGGGCTGAACAAAATGAGCATCACAAGCTTGGCGAAGCTGTAAAAAAACT TGAAGAAGAGCTTGAAGAAGCGAAATCCCAAATCAAAGAGAAGGAACTTGCTTATAAAAA TTGTTTTGATGCTGTTTCCAAACTAGAGAATTCCATCAAAGACCATGACAAAAACAGAGA AGGAAGACTTAAGGACTTGGAAAAAAATATTAAAACCATCAAAGCTCAAATGCAGGCAGC TTCCAAAGATTTAAAGAGTCATGAAAATGAAAAAGAGAAGCTTGTGATGGAGGAAGAAGC AATGAAGCAAGAACAATCGTCCTTGGAGAGCCACTTAACTTCATTGGAAACCCAAATCAG CACTCTGACTTCGGAAGTAGACGAGCAGCGAGCCAAGGTTGATGCCTTACAGAAGATTCA TGATGAGTCTCTTGCCGAGCTCAAGTTGATACATGCAAAGATGAAGGAATGTGATACACA GATAAGTGGTTTTGTCACTGACCAGGAAAAGTGTCTGCAGAAGCTTAGTGACATGAAGCT TGAGAGAAAGAAATTGGAAAATGAGGTCGTAAGGATGGAAACGGATCACAAGGACTGTTC CGTGAAAGTAGACAAACTTGTTGAGAAGCATACATGGATAGCATCTGAAAAGCAACTTTT TGGGAAAGGAGGGACAGATTATGATTTTGAATCTTGTGATCCGTATGTGGCCAGAGAAAA ACTTGAAAAGCTCCAATCAGATCAATCAGGCTTGGAAAAAAGAGTGAACAAGAAGGTTAT GGCTATGTTTGAGAAAGCAGAAGATGAATACAATGCTCTGATATCGAAAAAAAATACTAT CGAGAATGACAAATCAAAAATCACGAAAGTGATCGAGGAGCTTGATGAGAAGAAAAAAGA AACCCTGAAAGTTACTTGGGTTAAAGTTAACCAGGATTTCGGATCAATCTTTTCAACTCT ACTACCTGGCACCATGGCAAAACTAGAACCTCCTGAAGACGGTAACTTCCTTGATGGTCT TGAGGTGCGTGTTGCCTTTGGAAAAGTCTGGAAGCAGTCTTTATCAGAACTCAGTGGAGG GCAAAGATCTCTTCTTGCGCTATCACTAATATTGGCATTGCTTCTCTTCAAACCGGCTCC TCTTTATATATTAGATGAGGTTGATGCAGCTCTTGATCTCAGTCACACACAGAACATAGG AAGAATGATAAGAGCTCATTTCCCTCACTCGCAGTTTATCGTGGTTTCGCTGAAAGAAGG AATGTTCAACAATGCCAATGTTCTTTTCCGGACAAAGTTCGTTGATGGAGTTTCAACAGT CCAAAGGACAGTAACAAAGCAGACCAAGTGATATGCTTATACGTCATTAGATCAATCCAA TCAGTATTCAGATTTTGCAATTCCATTTGGCCGTTTCCGTCTAACATTTTCTTTGTATTG AAAATCAAGATCTTTGTGTAGAATATGACTGAGTTGTACAACCACTTTATGCAATGTAAT GCACTTGAAATCTTGAATTTCTTTGCAATATATGGTCCTGATTATAGAACTAGAGACAGC AATCAGACACTGCGATCACACTTGA