Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G58980.1
CDS Infomation	\| Neutral/alkaline non-lysosomal ceramidase \| Chr5:23811449-23814395 REVERSE LENGTH=2202 \| 201606
Sequence	ATGACGAGGTGGTCTATGTCTATGCACTGCACATTGTTCTTGCTATTTCTGTTGAGGCTC ACTTGTATATTCTCAGATTCCGATTATTTGATGGGTCTTGGAAGCTATGACATCACAGGA CCTGCAGCTGATGTTAACATGATGGGTTATGCTAACATGGAACAAGTAGCATCTGGTGTT CACTTCAGGCTCAGAGCTCGTGCGTTCATCGTGGCTGAGCCATACAAGAAAAGGATTGCT TTTGTTAATCTTGATGCTGGTATGGCCTCACAGCTTGTGACCATCAAAGTGATTGAAAGA TTGAAACAGAGGTACGGTGAGCTTTATACGGAGGAAAATGTTGCAATTAGTGGAACTCAT ACTCATGCTGGTCCAGGGGGTTATCTCCAATACATTTTGTACTTAGTTACATCTCTCGGG TTTGTTCATCAATCTTTCAATGCTCTTGTGGACGGTATAGAGCAAAGTATTATACAAGCT CATGAAAATCTTCGTCCCGGGTCCATTTTAATCAACAAAGGGGAGCTCTTGGATGCTGGT GTGAACCGTAGTCCCAGTGCTTACCTTAACAATCCGGCACATGAACGTAGTAAATATGAA TATGATGTAGATAAAGAGATGACACTTGTCAAATTCGTTGATGATCAATGGGGTCCAGTG GCACGTATCATGGAAGACTGGTTTGAACGAGAAAACGGTTGTAGATCAGTTGATGTTGAA TCTCCTAGAAGAGTCTCAAGCATAATCAGTGATCCTTATGATCAAGATTTGATGGAAATG GCATCCTCGTTACTGTCTACCGGCGGTAAAACCGTTACAAGGATGTCAAGCGTTGCTAGA CGGGTCAGAAGTAGATTTAGACACGCTGACAAACCTAGATTTGTCTCTGCCTTCTGTCAA ACTAACTGCGGTGATGTTAGTCCGAATGTGTTGGGAGCCTTCTGTATAGACACAGGCCTT CCTTGTGAATTCAACCAAAGTACTTGTGGTGGAAAGAATGAGCAATGCTACGGCCGTGGA CCAGGCTACCCTGATGAATTTGAGAGTACCCGCATTATTGGAGAGAGGCAGTTCAAGAAG GCTGCGGATCTTTTCACTAAAGCCTCTGAGGAGATACAAGGAAAAGTTGACTATCGTCAT GCATATGTTGATTTCTCTCAGCTTGAAGTGACGATTAATGGACAAAATGGAGGTTCCGAA GTGGTGAAAACATGTCCAGCTGCAATGGGTTTTGGTTTCGCTGCAGGAACAACTGATGGA CCTGGAGCATTTGACTTTAAACAAGGAGATGATCAGGGAAATCCTTTCTGGAGGCTTGTA AGGAACCTTCTCAAGAATCCAACTGAGGAACAAGTACGATGCCAACGACCTAAACCCATA TTGCTTGATACCGGTGAAATGAAACAACCATACGACTGGGCGCCGTCGATATTACCAGTT CAGATCCTCCGCATTGGCCAGCTAGTGATTCTCTGCGTCCCCGGAGAATTCACAACAATG GCAGGGAGGCGACTACGTGATGCCGTGAAAACAGTGCTTAAAGAAGGCAGCAATGGAAGA GAATTCAGCGTGGTAATAGCCGGGCTAACCAATTCGTATTCGCAGTATATTGCCACATTT GAGGAATACCAAGTTCAGAGATATGAGGGTGCATCGACTTTGTATGGACCTCACACGCTA AGCGGATACATTCAAGAATTCAAGAAACTAGCAAATGATCTTCTATCTGCTCAAACCACT GACCCGGGTCCCCAACCACCTGACTTACTTCACAAGCAAATAAGCTTACTAACACCTGTT GTTGCGGATATGACACCAATTGGAACTGCATTCGGAGATGTTACATCGGATGTTCCTCGG TTATCCAAATTCAGGAAGGGAGCTGACATAGTGAGGGTTCAATTCCGGTCAGCTAACCCG AGAAACGATCTGATGACGGAAGGAACTTTCGCGCTTGTTGAGAGGTGGCTCGAAGGAAGA GAGACATGGGTACCTGTTTATGATGATGATGACTTTTGCCTCCGGTTTAAGTGGTCAAGA CCGTTTAAACTCAGCACGCAGAGCACAGCAACTATCGAATGGAGAATCCCTGAAACCGCA TCACCTGGTGTTTATAGAATCACTCACTTTGGTTCAGCTAAAACTCCTATAAGCTCCATT CACCATTTCTCTGGTTCATCTAGTGCCTTTGTTGTATATTGA

Peptide Sequence

PEP ID	AT5G58980.1
PEP Infomation	\| Neutral/alkaline non-lysosomal ceramidase \| Chr5:23811449-23814395 REVERSE LENGTH=733 \| 201606
Sequence	MTRWSMSMHCTLFLLFLLRLTCIFSDSDYLMGLGSYDITGPAADVNMMGYANMEQVASGV HFRLRARAFIVAEPYKKRIAFVNLDAGMASQLVTIKVIERLKQRYGELYTEENVAISGTH THAGPGGYLQYILYLVTSLGFVHQSFNALVDGIEQSIIQAHENLRPGSILINKGELLDAG VNRSPSAYLNNPAHERSKYEYDVDKEMTLVKFVDDQWGPVARIMEDWFERENGCRSVDVE SPRRVSSIISDPYDQDLMEMASSLLSTGGKTVTRMSSVARRVRSRFRHADKPRFVSAFCQ TNCGDVSPNVLGAFCIDTGLPCEFNQSTCGGKNEQCYGRGPGYPDEFESTRIIGERQFKK AADLFTKASEEIQGKVDYRHAYVDFSQLEVTINGQNGGSEVVKTCPAAMGFGFAAGTTDG PGAFDFKQGDDQGNPFWRLVRNLLKNPTEEQVRCQRPKPILLDTGEMKQPYDWAPSILPV QILRIGQLVILCVPGEFTTMAGRRLRDAVKTVLKEGSNGREFSVVIAGLTNSYSQYIATF EEYQVQRYEGASTLYGPHTLSGYIQEFKKLANDLLSAQTTDPGPQPPDLLHKQISLLTPV VADMTPIGTAFGDVTSDVPRLSKFRKGADIVRVQFRSANPRNDLMTEGTFALVERWLEGR ETWVPVYDDDDFCLRFKWSRPFKLSTQSTATIEWRIPETASPGVYRITHFGSAKTPISSI HHFSGSSSAFVVY

Transcript Sequence

Transcript ID	AT5G58980.1
Transcript Infomation	\| Neutral/alkaline non-lysosomal ceramidase \| Chr5:23811449-23814683 REVERSE LENGTH=2404 \| 201606
Sequence	GAAACTTTATTGAGTATTTGTCTATTTGAGTTTCTCTCATCTTCTTTTGTTTTGCTTCAC ATCGTTCACATCAATTAGTTTCTATCAGCTCCAGCAAATGGTTAGTGTGTTCATCAGCTA AAATCATTAAGGATTGCGTTACTTCTTCTTCAGGAAGGACTAGAAATGAGAAAGAGTTGA TTACTCCATATTGAGTGTGAAGATGACGAGGTGGTCTATGTCTATGCACTGCACATTGTT CTTGCTATTTCTGTTGAGGCTCACTTGTATATTCTCAGATTCCGATTATTTGATGGGTCT TGGAAGCTATGACATCACAGGACCTGCAGCTGATGTTAACATGATGGGTTATGCTAACAT GGAACAAGTAGCATCTGGTGTTCACTTCAGGCTCAGAGCTCGTGCGTTCATCGTGGCTGA GCCATACAAGAAAAGGATTGCTTTTGTTAATCTTGATGCTGGTATGGCCTCACAGCTTGT GACCATCAAAGTGATTGAAAGATTGAAACAGAGGTACGGTGAGCTTTATACGGAGGAAAA TGTTGCAATTAGTGGAACTCATACTCATGCTGGTCCAGGGGGTTATCTCCAATACATTTT GTACTTAGTTACATCTCTCGGGTTTGTTCATCAATCTTTCAATGCTCTTGTGGACGGTAT AGAGCAAAGTATTATACAAGCTCATGAAAATCTTCGTCCCGGGTCCATTTTAATCAACAA AGGGGAGCTCTTGGATGCTGGTGTGAACCGTAGTCCCAGTGCTTACCTTAACAATCCGGC ACATGAACGTAGTAAATATGAATATGATGTAGATAAAGAGATGACACTTGTCAAATTCGT TGATGATCAATGGGGTCCAGTGGCACGTATCATGGAAGACTGGTTTGAACGAGAAAACGG TTGTAGATCAGTTGATGTTGAATCTCCTAGAAGAGTCTCAAGCATAATCAGTGATCCTTA TGATCAAGATTTGATGGAAATGGCATCCTCGTTACTGTCTACCGGCGGTAAAACCGTTAC AAGGATGTCAAGCGTTGCTAGACGGGTCAGAAGTAGATTTAGACACGCTGACAAACCTAG ATTTGTCTCTGCCTTCTGTCAAACTAACTGCGGTGATGTTAGTCCGAATGTGTTGGGAGC CTTCTGTATAGACACAGGCCTTCCTTGTGAATTCAACCAAAGTACTTGTGGTGGAAAGAA TGAGCAATGCTACGGCCGTGGACCAGGCTACCCTGATGAATTTGAGAGTACCCGCATTAT TGGAGAGAGGCAGTTCAAGAAGGCTGCGGATCTTTTCACTAAAGCCTCTGAGGAGATACA AGGAAAAGTTGACTATCGTCATGCATATGTTGATTTCTCTCAGCTTGAAGTGACGATTAA TGGACAAAATGGAGGTTCCGAAGTGGTGAAAACATGTCCAGCTGCAATGGGTTTTGGTTT CGCTGCAGGAACAACTGATGGACCTGGAGCATTTGACTTTAAACAAGGAGATGATCAGGG AAATCCTTTCTGGAGGCTTGTAAGGAACCTTCTCAAGAATCCAACTGAGGAACAAGTACG ATGCCAACGACCTAAACCCATATTGCTTGATACCGGTGAAATGAAACAACCATACGACTG GGCGCCGTCGATATTACCAGTTCAGATCCTCCGCATTGGCCAGCTAGTGATTCTCTGCGT CCCCGGAGAATTCACAACAATGGCAGGGAGGCGACTACGTGATGCCGTGAAAACAGTGCT TAAAGAAGGCAGCAATGGAAGAGAATTCAGCGTGGTAATAGCCGGGCTAACCAATTCGTA TTCGCAGTATATTGCCACATTTGAGGAATACCAAGTTCAGAGATATGAGGGTGCATCGAC TTTGTATGGACCTCACACGCTAAGCGGATACATTCAAGAATTCAAGAAACTAGCAAATGA TCTTCTATCTGCTCAAACCACTGACCCGGGTCCCCAACCACCTGACTTACTTCACAAGCA AATAAGCTTACTAACACCTGTTGTTGCGGATATGACACCAATTGGAACTGCATTCGGAGA TGTTACATCGGATGTTCCTCGGTTATCCAAATTCAGGAAGGGAGCTGACATAGTGAGGGT TCAATTCCGGTCAGCTAACCCGAGAAACGATCTGATGACGGAAGGAACTTTCGCGCTTGT TGAGAGGTGGCTCGAAGGAAGAGAGACATGGGTACCTGTTTATGATGATGATGACTTTTG CCTCCGGTTTAAGTGGTCAAGACCGTTTAAACTCAGCACGCAGAGCACAGCAACTATCGA ATGGAGAATCCCTGAAACCGCATCACCTGGTGTTTATAGAATCACTCACTTTGGTTCAGC TAAAACTCCTATAAGCTCCATTCACCATTTCTCTGGTTCATCTAGTGCCTTTGTTGTATA TTGA