Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G58880.1
CDS Infomation	\| LRR protein \| Chr5:23775966-23779601 FORWARD LENGTH=3270 \| 201606
Sequence	ATGGGCATTGACACGAAAGAGATCATCGTTATATTATGGAAAATTCTTGGATATTCGATG AACATGAGCATCAAATTCATGATAAACCACCCGGTTTTGTCAGGGGTTTCAATGTTTTTA CTCGTGCTATACATTTTCCTCCCTTCTCTGTTCTTCTTCTTGATCTATACATCACCGGTT CTTGCATGTGCTCTAGTGTATGCCCGAGAAAAGCTAGGGTTAAGATTCTCAAGTTCGTAT TCAGAGCCAAAGAAGAGTTGTGGAGGAGAAAAGAGATGCCATTTAAAACAACAACGAAGT GTTAGACGAAATGCTCGAATGAAAGTTGAAGAATGGGATTCACAGACAAGCGAAGAAGAG AAAGACAAAGTTATCTTGACTTCTCTTTACAATGATCTCCTTGGTCGTACTCCTCAATTC GAAGAGTCTCCAAAAGCTTTAGAAACCAATGTAGTAGAGGAAGAAGAAGACAAAGAGAAG GAGTTTCTTGGAGAGGGAGTTTCTCGTGATTTGGGTCATCTCAACGTTGAAGAACCAATG GTTTGCAACTGTGAGATCAAATATGGAGAATCAGATGGTAAAGTAGAGATGAAACAGGAG ATGAGTAATGCTAATGAGCATGGGATTTCAGAGATTGAGAGAAATAAGAGACTAGAGTCT TTAATCGCTAGAAGAAGAGCGAGGAGACGCTTTAGACTAGCTTTAGATCAAAAGAATAAG CTTCAAGCTGAAGAAACAACTAGCCCTAGACAGAACAACACCAACAACCTTCACGTTACG GTTTCGAGGAACTCACTTGAAAAACGTCGAAATAATTCATCAGATGGTACTACTGTTAAA GGATTACAGATTCCAGGCTCAGCTCCTTCTGTGATGTTACAAGGAAGAAACCCTTTTGAC ATTCCTTATGATCCTCAAGAAGAAAGACCTAATCTTACTGGAGATAGCTTTGATCAAGAG TTTTCATTGTTTAATCAAAAAGATTTGTTCTTTTGTCGTCATGAGAGCTTCTGTCGTTTT TCTCTGTTCTCACCAGAACATGTTCAGTGTATGAACAGCCCAGTTTCTGCTTCAGACATT TCAACTACTAGGAAACGTTTAGATTTGGAGAATGAATATATTGATCATACTGAACAAAAT CTCCCATTAAATGGAAAAGAAGCTACAATAGAAGACGATGATAAAAGCGTTGTGAGTCGA AAAAGCGAAGAAAAAGAGGTAGAAATGAATGATGAGACAGATTCAAACAAAGAAGAATGT GATGATTCAAGTTGTTCAGAAGAAAGTGAGTCAGAACTATGCCGTTTAAACAAAGCGGAG CTCAGGGAAGCTATATGCCAATCCATGGACAACAATCCCGGTTATCTTGTGAATCAAGCA AGAAATAGTATTCCAAGCACATTACCTAGAGGTATAGTAGCGCCAAGACTAGATGATAAC AACATGTTTTACGCTCGCAAATGTGGAAATTCGCACAGTCGAACATTTTCAGTTGCCTCG GATATGCAAGTTGAGGTTTCAGAGATTGGTTCACCTCCTACAACAGTTGATTGGCTTGAT GACTGGTCTACTGGTGGTGAATCTTACATTTATGATACAGATATTGACAGAGAAATCGTC CGCGATGAAGAATCACGTAAGAGGATGTCTCATCAATATGAATCAAGAAGTGGAATAGGA TCAAAAGAGGAGAATAGTGAGCCAAGTACTAAACCTGAGGCCAAACCAGATCAGGATTGT GTGGTAGATGAAGACCTTATAACAGTTGATGATATGTCATTGTTAGATAGAAGAACCCAA AGTGAAGAGATTTTTGAGCAGACACCTTCTAGTTCCAGTGATGTGTCCAAGCCTACAAGT TCTGGGAGATTTGAAGGTATGTTGTTCCATACAAGTGCCTCATTGTCGTCTATAACAGAA GAACCTGAAACAATCTTGGATTCGATCGATGGCGTCAACTCGGAGATTATGAATAGTTTG ACTGGAGAATTAACTGACCAGAGACCTCTGACTAGTCTTGATTTATCCATGGAGAATTTG ATAGATGAAGAAGTTGCTGATATGCAACAAATAGAAAATGATGATCTTTGTGGATCTCCT AAGATTATTGATTTTGATATCATTGATCATCAGCAGACAGATCAAACGTCGGATAGCATT CAAGGAGAACATGAGGAAACTAAGAGCTTCTTGGATGCTTCTTTGGACACACCCTTTATA GAATCATTTGAGAGAGAGGTACAAGAAGAAGAAGAATCAAACTTAGACAAGTCTACTGAG GAAACAACAAAAGAAACAGAAAGTGATTTGAAGAGTTCTCCGGGACAAGTTTCTACAGAA TTACTAGAAAGTGTGGTAAGGGAAGAGAATGGTCAGGAATTAGTCAAAAGTGCTGATGAG AAAGCAATGCTAGTAGAGGAAGAGAAGACTCATAATGTCTTGGAAGCATCTTCGAGCAAT GCTCATACACAGTTGGTTGATTTAGACTATGGAAACGCAGAAAATTCTAGTGATGTGATA CTTCTGCAAGTCCAAGATAGTCATAAGTCACCACTAGATGAGTCAGTTGATCAGGAGATC TCTAAGGAAGTAGAAAAAACAGAGTTATTAAAAGATTTTTGTGGTGAATCAACCCAAGAA TACAAAAATAGAGGAAATGTTGAGGCCTGTGGAAACGCAGAAAATGCTAGTGATGTGTTA CTTCTGCAAGTCCAAGATGGTAATAACTCACCACTAGATGAGTCAACTGATCAGGAGATT TCTAAGGAAGAAGAAAAAACAGAGGTATTGAAAGATTTTAATGATGAAACGCCCCAAGGA TACAAAAATAGAGCCAATGTTGAGGAAGAATCAGTAGTTTTAGCTGACACTCAAAACTCA CAAGATTCACAAACATGGACTCAACAGTGTGGTATAGATTCTTCCCAAGGGATATCACCA AGAACATTGGAGATCACCCAGCAACTAGAGCAAGACGATGTTATTGCCTCTTCCTCAAAC ACCGTCTCTCAAGATATCAATAAAGATATTACCGCGGCAGTAGCCAATGACTTAGCTGCT AGTGAGAGGAATGATGAAGTGATTCTGAAACTTGATGAGCAAGTTGGAGAAGCTATGGAA AAGGAACTAGAGCTTAATTTAGAATCACTGCACCATAATATTGGTTTAGTCGGTAGAGAA GACGATGAAGAATCCAAGAAAGTAATAGAGGAAATGCAAAATGCGGAGATCCAAACAACA AAACACGAAAACAGAGTCTTAGAAAATTAA

Peptide Sequence

PEP ID	AT5G58880.1
PEP Infomation	\| LRR protein \| Chr5:23775966-23779601 FORWARD LENGTH=1089 \| 201606
Sequence	MGIDTKEIIVILWKILGYSMNMSIKFMINHPVLSGVSMFLLVLYIFLPSLFFFLIYTSPV LACALVYAREKLGLRFSSSYSEPKKSCGGEKRCHLKQQRSVRRNARMKVEEWDSQTSEEE KDKVILTSLYNDLLGRTPQFEESPKALETNVVEEEEDKEKEFLGEGVSRDLGHLNVEEPM VCNCEIKYGESDGKVEMKQEMSNANEHGISEIERNKRLESLIARRRARRRFRLALDQKNK LQAEETTSPRQNNTNNLHVTVSRNSLEKRRNNSSDGTTVKGLQIPGSAPSVMLQGRNPFD IPYDPQEERPNLTGDSFDQEFSLFNQKDLFFCRHESFCRFSLFSPEHVQCMNSPVSASDI STTRKRLDLENEYIDHTEQNLPLNGKEATIEDDDKSVVSRKSEEKEVEMNDETDSNKEEC DDSSCSEESESELCRLNKAELREAICQSMDNNPGYLVNQARNSIPSTLPRGIVAPRLDDN NMFYARKCGNSHSRTFSVASDMQVEVSEIGSPPTTVDWLDDWSTGGESYIYDTDIDREIV RDEESRKRMSHQYESRSGIGSKEENSEPSTKPEAKPDQDCVVDEDLITVDDMSLLDRRTQ SEEIFEQTPSSSSDVSKPTSSGRFEGMLFHTSASLSSITEEPETILDSIDGVNSEIMNSL TGELTDQRPLTSLDLSMENLIDEEVADMQQIENDDLCGSPKIIDFDIIDHQQTDQTSDSI QGEHEETKSFLDASLDTPFIESFEREVQEEEESNLDKSTEETTKETESDLKSSPGQVSTE LLESVVREENGQELVKSADEKAMLVEEEKTHNVLEASSSNAHTQLVDLDYGNAENSSDVI LLQVQDSHKSPLDESVDQEISKEVEKTELLKDFCGESTQEYKNRGNVEACGNAENASDVL LLQVQDGNNSPLDESTDQEISKEEEKTEVLKDFNDETPQGYKNRANVEEESVVLADTQNS QDSQTWTQQCGIDSSQGISPRTLEITQQLEQDDVIASSSNTVSQDINKDITAAVANDLAA SERNDEVILKLDEQVGEAMEKELELNLESLHHNIGLVGREDDEESKKVIEEMQNAEIQTT KHENRVLEN

Transcript Sequence

Transcript ID	AT5G58880.1
Transcript Infomation	\| LRR protein \| Chr5:23775891-23779855 FORWARD LENGTH=3599 \| 201606
Sequence	AGATCTCTGAAAAAAAAGGATCTTGTTTCAATTGATTTTCATATCAATTTTTCATCTTTT GAGATTATATGGAAAATGGGCATTGACACGAAAGAGATCATCGTTATATTATGGAAAATT CTTGGATATTCGATGAACATGAGCATCAAATTCATGATAAACCACCCGGTTTTGTCAGGG GTTTCAATGTTTTTACTCGTGCTATACATTTTCCTCCCTTCTCTGTTCTTCTTCTTGATC TATACATCACCGGTTCTTGCATGTGCTCTAGTGTATGCCCGAGAAAAGCTAGGGTTAAGA TTCTCAAGTTCGTATTCAGAGCCAAAGAAGAGTTGTGGAGGAGAAAAGAGATGCCATTTA AAACAACAACGAAGTGTTAGACGAAATGCTCGAATGAAAGTTGAAGAATGGGATTCACAG ACAAGCGAAGAAGAGAAAGACAAAGTTATCTTGACTTCTCTTTACAATGATCTCCTTGGT CGTACTCCTCAATTCGAAGAGTCTCCAAAAGCTTTAGAAACCAATGTAGTAGAGGAAGAA GAAGACAAAGAGAAGGAGTTTCTTGGAGAGGGAGTTTCTCGTGATTTGGGTCATCTCAAC GTTGAAGAACCAATGGTTTGCAACTGTGAGATCAAATATGGAGAATCAGATGGTAAAGTA GAGATGAAACAGGAGATGAGTAATGCTAATGAGCATGGGATTTCAGAGATTGAGAGAAAT AAGAGACTAGAGTCTTTAATCGCTAGAAGAAGAGCGAGGAGACGCTTTAGACTAGCTTTA GATCAAAAGAATAAGCTTCAAGCTGAAGAAACAACTAGCCCTAGACAGAACAACACCAAC AACCTTCACGTTACGGTTTCGAGGAACTCACTTGAAAAACGTCGAAATAATTCATCAGAT GGTACTACTGTTAAAGGATTACAGATTCCAGGCTCAGCTCCTTCTGTGATGTTACAAGGA AGAAACCCTTTTGACATTCCTTATGATCCTCAAGAAGAAAGACCTAATCTTACTGGAGAT AGCTTTGATCAAGAGTTTTCATTGTTTAATCAAAAAGATTTGTTCTTTTGTCGTCATGAG AGCTTCTGTCGTTTTTCTCTGTTCTCACCAGAACATGTTCAGTGTATGAACAGCCCAGTT TCTGCTTCAGACATTTCAACTACTAGGAAACGTTTAGATTTGGAGAATGAATATATTGAT CATACTGAACAAAATCTCCCATTAAATGGAAAAGAAGCTACAATAGAAGACGATGATAAA AGCGTTGTGAGTCGAAAAAGCGAAGAAAAAGAGGTAGAAATGAATGATGAGACAGATTCA AACAAAGAAGAATGTGATGATTCAAGTTGTTCAGAAGAAAGTGAGTCAGAACTATGCCGT TTAAACAAAGCGGAGCTCAGGGAAGCTATATGCCAATCCATGGACAACAATCCCGGTTAT CTTGTGAATCAAGCAAGAAATAGTATTCCAAGCACATTACCTAGAGGTATAGTAGCGCCA AGACTAGATGATAACAACATGTTTTACGCTCGCAAATGTGGAAATTCGCACAGTCGAACA TTTTCAGTTGCCTCGGATATGCAAGTTGAGGTTTCAGAGATTGGTTCACCTCCTACAACA GTTGATTGGCTTGATGACTGGTCTACTGGTGGTGAATCTTACATTTATGATACAGATATT GACAGAGAAATCGTCCGCGATGAAGAATCACGTAAGAGGATGTCTCATCAATATGAATCA AGAAGTGGAATAGGATCAAAAGAGGAGAATAGTGAGCCAAGTACTAAACCTGAGGCCAAA CCAGATCAGGATTGTGTGGTAGATGAAGACCTTATAACAGTTGATGATATGTCATTGTTA GATAGAAGAACCCAAAGTGAAGAGATTTTTGAGCAGACACCTTCTAGTTCCAGTGATGTG TCCAAGCCTACAAGTTCTGGGAGATTTGAAGGTATGTTGTTCCATACAAGTGCCTCATTG TCGTCTATAACAGAAGAACCTGAAACAATCTTGGATTCGATCGATGGCGTCAACTCGGAG ATTATGAATAGTTTGACTGGAGAATTAACTGACCAGAGACCTCTGACTAGTCTTGATTTA TCCATGGAGAATTTGATAGATGAAGAAGTTGCTGATATGCAACAAATAGAAAATGATGAT CTTTGTGGATCTCCTAAGATTATTGATTTTGATATCATTGATCATCAGCAGACAGATCAA ACGTCGGATAGCATTCAAGGAGAACATGAGGAAACTAAGAGCTTCTTGGATGCTTCTTTG GACACACCCTTTATAGAATCATTTGAGAGAGAGGTACAAGAAGAAGAAGAATCAAACTTA GACAAGTCTACTGAGGAAACAACAAAAGAAACAGAAAGTGATTTGAAGAGTTCTCCGGGA CAAGTTTCTACAGAATTACTAGAAAGTGTGGTAAGGGAAGAGAATGGTCAGGAATTAGTC AAAAGTGCTGATGAGAAAGCAATGCTAGTAGAGGAAGAGAAGACTCATAATGTCTTGGAA GCATCTTCGAGCAATGCTCATACACAGTTGGTTGATTTAGACTATGGAAACGCAGAAAAT TCTAGTGATGTGATACTTCTGCAAGTCCAAGATAGTCATAAGTCACCACTAGATGAGTCA GTTGATCAGGAGATCTCTAAGGAAGTAGAAAAAACAGAGTTATTAAAAGATTTTTGTGGT GAATCAACCCAAGAATACAAAAATAGAGGAAATGTTGAGGCCTGTGGAAACGCAGAAAAT GCTAGTGATGTGTTACTTCTGCAAGTCCAAGATGGTAATAACTCACCACTAGATGAGTCA ACTGATCAGGAGATTTCTAAGGAAGAAGAAAAAACAGAGGTATTGAAAGATTTTAATGAT GAAACGCCCCAAGGATACAAAAATAGAGCCAATGTTGAGGAAGAATCAGTAGTTTTAGCT GACACTCAAAACTCACAAGATTCACAAACATGGACTCAACAGTGTGGTATAGATTCTTCC CAAGGGATATCACCAAGAACATTGGAGATCACCCAGCAACTAGAGCAAGACGATGTTATT GCCTCTTCCTCAAACACCGTCTCTCAAGATATCAATAAAGATATTACCGCGGCAGTAGCC AATGACTTAGCTGCTAGTGAGAGGAATGATGAAGTGATTCTGAAACTTGATGAGCAAGTT GGAGAAGCTATGGAAAAGGAACTAGAGCTTAATTTAGAATCACTGCACCATAATATTGGT TTAGTCGGTAGAGAAGACGATGAAGAATCCAAGAAAGTAATAGAGGAAATGCAAAATGCG GAGATCCAAACAACAAAACACGAAAACAGAGTCTTAGAAAATTAACACATTGATGATACT AACACACAGAATCATGATGACGAAAACAAGTAACGCTGCACATAAGGTACGGTACGCCAC AAGGAAAATGTGTTAAGAATTCTTTTTGATCCATAACAGGTGAAACATTGTGTTGTATCA TTATTTAATGGACTTTTTGTTTAATTATACAACTTGTAAAGGCAACTCATTCTTTTGTAA TATACTGTATAGAGATGGATAAATCTTTTGAATATATACTCACAGAAGAACTACTAGCA