Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G58500.1
CDS Infomation	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) \| Chr5:23645535-23646083 REVERSE LENGTH=549 \| 201606
Sequence	ATGGAGGGAGAAACCGCAGCCAAAGCAGCGGCAAGTTCCTCCTCATCCCCGAGCCGGTAC GAGTCTCAAAAGAGGCGAGACTGGAACACTTTCCTTCAGTATCTAAGGAACCACAAGCCA CCTCTGAATCTGTCTCGTTGTAGTGGCGCACACGTCCTTGAGTTCCTTAAGTACCTCGAC CAGTTTGGTAAGACCAAAGTCCATGCCACGGCTTGTCCCTTCTTCGGACAACCTAACCCA CCGTCTCAGTGCACTTGCCCTCTCAAGCAAGCTTGGGGAAGTCTCGATGCTCTCATCGGC CGTCTAAGGGCTGCTTTCGAGGAAATCGGCGGTGGTCTTCCTGAGTCAAACCCTTTCGCT GCCAAGGCTGTTAGGATCTATCTTAAAGAAGTCCGTCAAACACAGGCTAAGGCTCGAGGG ATTCCTTACGACAAGAAGAAAAGAAAACGTCCGCATACAGACACGGCAACTCCAATCGCC GGTGACGGAGACGATGCCGAAGGAAGTGGTGGTGCTGCTTTGGTCGTTACGGCTGCAACT ACGGTATAG

Peptide Sequence

PEP ID	AT5G58500.1
PEP Infomation	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) \| Chr5:23645535-23646083 REVERSE LENGTH=182 \| 201606
Sequence	MEGETAAKAAASSSSSPSRYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLD QFGKTKVHATACPFFGQPNPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFA AKAVRIYLKEVRQTQAKARGIPYDKKKRKRPHTDTATPIAGDGDDAEGSGGAALVVTAAT TV

Transcript Sequence

Transcript ID	AT5G58500.1
Transcript Infomation	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) \| Chr5:23645062-23646347 REVERSE LENGTH=1286 \| 201606
Sequence	ATATTATGATGGGACGTAAAAAGAAGTGAGAAACTGAAGTAAAAAAAAAAAAGAAGTGAG AAACTACAATATGAATAATCAAATCCAACTTGTTGCTTCTGACTTGTGAGTTGTGACTGA ACATAAACTCTTCTTCTCTTTCTCTGCCTCTCTCTTTCTTCTCTCTCTCTCAGGCACACG ATCCACACACACACACAAAGACTCAAAACAAAGTCAAGAACCCTAATATCTTAAGAACGT CCTGACATAACCATAGGATCAAAGATGGAGGGAGAAACCGCAGCCAAAGCAGCGGCAAGT TCCTCCTCATCCCCGAGCCGGTACGAGTCTCAAAAGAGGCGAGACTGGAACACTTTCCTT CAGTATCTAAGGAACCACAAGCCACCTCTGAATCTGTCTCGTTGTAGTGGCGCACACGTC CTTGAGTTCCTTAAGTACCTCGACCAGTTTGGTAAGACCAAAGTCCATGCCACGGCTTGT CCCTTCTTCGGACAACCTAACCCACCGTCTCAGTGCACTTGCCCTCTCAAGCAAGCTTGG GGAAGTCTCGATGCTCTCATCGGCCGTCTAAGGGCTGCTTTCGAGGAAATCGGCGGTGGT CTTCCTGAGTCAAACCCTTTCGCTGCCAAGGCTGTTAGGATCTATCTTAAAGAAGTCCGT CAAACACAGGCTAAGGCTCGAGGGATTCCTTACGACAAGAAGAAAAGAAAACGTCCGCAT ACAGACACGGCAACTCCAATCGCCGGTGACGGAGACGATGCCGAAGGAAGTGGTGGTGCT GCTTTGGTCGTTACGGCTGCAACTACGGTATAGTGGAGACGATCCAGCTACTAGCTAGAT GCTAAAATCTTAAAAGAATTACGGTATAGTAATTCTTGAGTTCTTTACTTTTTTTATAAA TTATATATTTCGTTTAGTTAATTATTTGAGATGTAAATTGCAATTTATATAGATGGAAAA GACGATCACCGATTATTAGTAAAATGAGATCTTATTTATATTTCATTTATTATCTTTCAC CGTGATTGATAGATAGATCAGTACGAAAGTGTGTAATGGTGATGTGTGGACGTGCGAAGT CTCGGGTCTAACGTGAGTCGTGATTTCTCTGAAAAGTCATAAATCTTCAGGTGCTTTCTT TTAAAAGCTTTAGGAATGATGATCATCATCTTCTTACTTTCACTTTATTTTCATGTTCTT CTTTACAAATCCAACCTCTAAAAAAAAGATTTAGTTCTTGTTTTGATTTAGGATACTATT TACATTTGGTACACCTAGAAATGTGG