Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G58170.1
CDS Infomation	\| SHV3-like 5 \| Chr5:23540261-23543092 REVERSE LENGTH=2253 \| 201606
Sequence	ATGCTGAGGTTTATCATATTTTTCTCCCTTTTTATACACTTATGTGTTGCAGCCCCCCAG ACTCCTGCTGCTGCCGCGGCGGTTCCTGCTAAGAAATGGCTCACCCTTAATGGACAAGAG CCTGCCGTTGTGGCCAGAGGGGGCTTCTCGGGTCTTTTCCCTGAGTCAAGCGCCTCTGCA AACGACTTGGCTATTGGCACCAGCTCGCCTGGCCTCACAATGTTGTGCAACCTTCAGATG ACTAAGGACGGTGTGGGCCTTTGCTTGTCAGATATCATACTTGACAATGCAACCACCATA TCTTCAGTCTTCCCTAAAGCCCAGAAGACCTACAAGGTCAACGGTCAGGACCTCAAGGGA TGGTTTGTCCTTGATTACGATGCCGACACCATCTTCAACAATGTCACTTTGGTCCAGAAC ATCTTCTCTCGGCCTAGCATCTTCGACGGCCAAATGTCGGTTTCCGCAGTGGAGGACGTC CTTGGAACCAAGCCTCCCAAGTTTTGGTTGAGCGTTCAGTACGATGCCTTCTACATGGAA CACAAGCTGAGCCCAGCCGAGTACCTGAGAAGCTTGCAATTCCGCGGCATTAATGTCATC TCATCTCCAGAGATTGGTTTCTTGAAGAGCATCGGGATGGACGCGGGCAGGGCCAAGACA AAGCTCATATTCGAGTTCAAAGACCCAGAGGCAGTTGAGCCCACCACCAACAAGAAGTAC AGTGAGATTCAGCAGAACCTCGCAGCCATCAAGGCCTTTGCTTCAGGCGTTCTTGTGCCC AAAGACTACATTTGGCCCATTGACTCAGCTAAGTACCTTAAGCCCGCCACCACTTTTGTG GCTGATGCCCACAAAGCCGGTCTAGAGGTCTATGCTTCAGGGTTTGCCAATGACTTGCGC ACCAGCTTTAACTACAGCTATGATCCCTCCGCTGAGTATCTCCAGTTTGTGGACAATGGC CAGTTTTCTGTTGATGGCGTCATTACTGATTTCCCGCCAACAGCATCACAATCCATCACT TGCTTTTCTCACCAAAATGGCAATCTCCCCAAAGCAGGGCATGCGTTGGTTATAACTCAC AATGGAGCAAGCGGAGACTATCCAGGCTGCACTGATCTGGCTTACCAGAAAGCAGTCGAT GATGGAGCAGACGTGATCGACTGCTCTGTTCAGATGTCTAAAGACGGAATCGCTTTCTGC CATGATGCTGCAGACCTTACAGCAAGTACCACCGCCATGACTATTTTCATGTCCCGAGCC ACAAGCGTTCCTGAGATCCAGCCTACCAATGGCATTTTTTCTTTTGATCTTACATGGGCT GAGATCCAGTCTGTGAAGCCACAAATAGAGAACCCCTTCACTGCCACGGGCTTCCAGAGA AATCCAGCAAACAAAAACGCTGGAAAGTTCATTACTCTTGCGGATTTCCTTGACTTCAGC AAAGCAAAGGCTGTCACCGGAGTTATGATCAACATCGAGAATGCTGCTTACCTAGCCTCA AAGAAGGGCCTAGGAGTCGTAGACGCAGTTAAGTCGGCTCTGGCCAAGTCCACACTCGAC AAGCAATCAACTCAGAAAGTTTTGATTCAGTCAGATGACAGTTCGGTCCTGGCCAGTTTT GAGGCTGTCCCTCCGTACACGAGAGTCTTGAGCATTGACAAGGAAATCGGAGGTGCTCCC AAGCCATCAGTCGATGAAATCAAGAAGTACGCAGAAGCTGTCAATCTCTTGAGAACTTCC CTAGTCACTGTCTCCCAAAGTTTTACCACAGGGAAGACTAACGTTGTGGAGGAAATGCAC AAAGGGAATATCTCTGTTTATGTTTCAGTGCTAAGAAACGAGTACATCTCCGTAGCGTTC GACTACTTCTCTGACCCTACAATAGAGCTTGCCACATTCATTTCAGGGAGTGGCGTTGAT GGAGTCATCACGGAGTTCCCTGCCACCGCTACCAGATACTTAAAGAGTCCATGCTCAGAT TTGAACAAAGAACAGCCCTATGCAATCTTACCAGCAGAAGCCGGTGGTCTAGTCGTCGTG GCAGACAAGGAAGCACAACCACCAGCTAGTGCCCCAAACCCGCCTCTTGAGGCCAAAGAC GTGATTGATCCGCCTCTGCCTCCAGTTGCAAACTTGGCTGCCTCCAATGCAACTGGAGGA GCTCAGTCACATCCTCCTCCTGCTTCAGGAACCGTTGCCAACGCTGCAAATCTCGGTCTT TCCTTGCTGGCAATGTTGGCCTTAGGAGTCTAA

Peptide Sequence

PEP ID	AT5G58170.1
PEP Infomation	\| SHV3-like 5 \| Chr5:23540261-23543092 REVERSE LENGTH=750 \| 201606
Sequence	MLRFIIFFSLFIHLCVAAPQTPAAAAAVPAKKWLTLNGQEPAVVARGGFSGLFPESSASA NDLAIGTSSPGLTMLCNLQMTKDGVGLCLSDIILDNATTISSVFPKAQKTYKVNGQDLKG WFVLDYDADTIFNNVTLVQNIFSRPSIFDGQMSVSAVEDVLGTKPPKFWLSVQYDAFYME HKLSPAEYLRSLQFRGINVISSPEIGFLKSIGMDAGRAKTKLIFEFKDPEAVEPTTNKKY SEIQQNLAAIKAFASGVLVPKDYIWPIDSAKYLKPATTFVADAHKAGLEVYASGFANDLR TSFNYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGNLPKAGHALVITH NGASGDYPGCTDLAYQKAVDDGADVIDCSVQMSKDGIAFCHDAADLTASTTAMTIFMSRA TSVPEIQPTNGIFSFDLTWAEIQSVKPQIENPFTATGFQRNPANKNAGKFITLADFLDFS KAKAVTGVMINIENAAYLASKKGLGVVDAVKSALAKSTLDKQSTQKVLIQSDDSSVLASF EAVPPYTRVLSIDKEIGGAPKPSVDEIKKYAEAVNLLRTSLVTVSQSFTTGKTNVVEEMH KGNISVYVSVLRNEYISVAFDYFSDPTIELATFISGSGVDGVITEFPATATRYLKSPCSD LNKEQPYAILPAEAGGLVVVADKEAQPPASAPNPPLEAKDVIDPPLPPVANLAASNATGG AQSHPPPASGTVANAANLGLSLLAMLALGV

Transcript Sequence

Transcript ID	AT5G58170.1
Transcript Infomation	\| SHV3-like 5 \| Chr5:23540049-23543345 REVERSE LENGTH=2622 \| 201606
Sequence	CAATTTTGAAACCCCTTCTTTCTTTGGCCCCAAGCTTCCGTTTTTCTTCATCTTATTCTT TCAAAATCTCAAACCCATAAGGGAAAAAGAAGCATAAAGAGGCAGAAGAGGAAGGTGGTC ATATGTTCTTGCTTTCGCCTTGATCAATCATACAGAGATGCTGAGGTTTATCATATTTTT CTCCCTTTTTATACACTTATGTGTTGCAGCCCCCCAGACTCCTGCTGCTGCCGCGGCGGT TCCTGCTAAGAAATGGCTCACCCTTAATGGACAAGAGCCTGCCGTTGTGGCCAGAGGGGG CTTCTCGGGTCTTTTCCCTGAGTCAAGCGCCTCTGCAAACGACTTGGCTATTGGCACCAG CTCGCCTGGCCTCACAATGTTGTGCAACCTTCAGATGACTAAGGACGGTGTGGGCCTTTG CTTGTCAGATATCATACTTGACAATGCAACCACCATATCTTCAGTCTTCCCTAAAGCCCA GAAGACCTACAAGGTCAACGGTCAGGACCTCAAGGGATGGTTTGTCCTTGATTACGATGC CGACACCATCTTCAACAATGTCACTTTGGTCCAGAACATCTTCTCTCGGCCTAGCATCTT CGACGGCCAAATGTCGGTTTCCGCAGTGGAGGACGTCCTTGGAACCAAGCCTCCCAAGTT TTGGTTGAGCGTTCAGTACGATGCCTTCTACATGGAACACAAGCTGAGCCCAGCCGAGTA CCTGAGAAGCTTGCAATTCCGCGGCATTAATGTCATCTCATCTCCAGAGATTGGTTTCTT GAAGAGCATCGGGATGGACGCGGGCAGGGCCAAGACAAAGCTCATATTCGAGTTCAAAGA CCCAGAGGCAGTTGAGCCCACCACCAACAAGAAGTACAGTGAGATTCAGCAGAACCTCGC AGCCATCAAGGCCTTTGCTTCAGGCGTTCTTGTGCCCAAAGACTACATTTGGCCCATTGA CTCAGCTAAGTACCTTAAGCCCGCCACCACTTTTGTGGCTGATGCCCACAAAGCCGGTCT AGAGGTCTATGCTTCAGGGTTTGCCAATGACTTGCGCACCAGCTTTAACTACAGCTATGA TCCCTCCGCTGAGTATCTCCAGTTTGTGGACAATGGCCAGTTTTCTGTTGATGGCGTCAT TACTGATTTCCCGCCAACAGCATCACAATCCATCACTTGCTTTTCTCACCAAAATGGCAA TCTCCCCAAAGCAGGGCATGCGTTGGTTATAACTCACAATGGAGCAAGCGGAGACTATCC AGGCTGCACTGATCTGGCTTACCAGAAAGCAGTCGATGATGGAGCAGACGTGATCGACTG CTCTGTTCAGATGTCTAAAGACGGAATCGCTTTCTGCCATGATGCTGCAGACCTTACAGC AAGTACCACCGCCATGACTATTTTCATGTCCCGAGCCACAAGCGTTCCTGAGATCCAGCC TACCAATGGCATTTTTTCTTTTGATCTTACATGGGCTGAGATCCAGTCTGTGAAGCCACA AATAGAGAACCCCTTCACTGCCACGGGCTTCCAGAGAAATCCAGCAAACAAAAACGCTGG AAAGTTCATTACTCTTGCGGATTTCCTTGACTTCAGCAAAGCAAAGGCTGTCACCGGAGT TATGATCAACATCGAGAATGCTGCTTACCTAGCCTCAAAGAAGGGCCTAGGAGTCGTAGA CGCAGTTAAGTCGGCTCTGGCCAAGTCCACACTCGACAAGCAATCAACTCAGAAAGTTTT GATTCAGTCAGATGACAGTTCGGTCCTGGCCAGTTTTGAGGCTGTCCCTCCGTACACGAG AGTCTTGAGCATTGACAAGGAAATCGGAGGTGCTCCCAAGCCATCAGTCGATGAAATCAA GAAGTACGCAGAAGCTGTCAATCTCTTGAGAACTTCCCTAGTCACTGTCTCCCAAAGTTT TACCACAGGGAAGACTAACGTTGTGGAGGAAATGCACAAAGGGAATATCTCTGTTTATGT TTCAGTGCTAAGAAACGAGTACATCTCCGTAGCGTTCGACTACTTCTCTGACCCTACAAT AGAGCTTGCCACATTCATTTCAGGGAGTGGCGTTGATGGAGTCATCACGGAGTTCCCTGC CACCGCTACCAGATACTTAAAGAGTCCATGCTCAGATTTGAACAAAGAACAGCCCTATGC AATCTTACCAGCAGAAGCCGGTGGTCTAGTCGTCGTGGCAGACAAGGAAGCACAACCACC AGCTAGTGCCCCAAACCCGCCTCTTGAGGCCAAAGACGTGATTGATCCGCCTCTGCCTCC AGTTGCAAACTTGGCTGCCTCCAATGCAACTGGAGGAGCTCAGTCACATCCTCCTCCTGC TTCAGGAACCGTTGCCAACGCTGCAAATCTCGGTCTTTCCTTGCTGGCAATGTTGGCCTT AGGAGTCTAAAATAAAGATTGATGCAAAAGTTTGTAATATGAAATCCTCTCGTTGAGACA CATATGCTATATGTTTTTATCATACGTTACGACAATATACATACACACACATGCACACTA CGATCAAAGCTCTAAAGAAGCCTTCCTTGTTGTGTCGGGGTGTTGATTAGCTCAGAAATT GGAATCTTGATAATCTACCAATTCTTATTTTATATCTTTTTC