Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G58003.1
CDS Infomation

| C-terminal domain phosphatase-like 4 | Chr5:23480066-23481924 FORWARD LENGTH=1323 | 201606
Sequence

ATGAGCGTAGCAAGTGATTCTCCAGTTCATTCATCAAGTAGTAGTGACGATCTTGCTGCA
TTCCTTGATGCTGAATTAGACTCTGCATCAGATGCTTCGTCTGGACCCAGCGAAGAAGAA
GAAGCTGAGGATGATGTAGAATCTGGGTTAAAGAGACAAAAGTTGGAGCATTTAGAGGAA
GCATCCTCAAGCAAAGGCGAATGCGAGCATCCAGGATCATTTGGGAATATGTGCTTTGTA
TGTGGACAAAAACTGGAAGAAACTGGTGTTTCATTTAGATACATACACAAGGAAATGAGG
CTCAATGAAGATGAAATCTCCCGGTTGCGTGATTCAGATTCGAGATTCTTGCAACGCCAG
CGGAAGTTGTATTTAGTTCTCGATCTAGACCACACACTGCTAAATACAACCATACTGAGG
GACCTAAAACCAGAGGAGGAATACTTGAAAAGTCATACTCATTCTCTTCAAGATGGTTGC
AATGTTTCCGGAGGCAGTCTTTTCCTACTGGAATTTATGCAAATGATGACCAAACTGAGG
CCGTTTGTTCACTCATTTCTAAAAGAAGCTAGTGAGATGTTTGTGATGTACATATACACA
ATGGGAGATAGGAATTATGCACGACAGATGGCCAAGCTGCTGGACCCCAAAGGAGAGTAC
TTTGGTGATCGGGTCATTTCTCGGGATGACGGCACAGTGAGACATGAAAAGAGTCTAGAT
GTGGTGCTTGGACAAGAAAGTGCTGTTCTGATTCTTGACGATACAGAGAATGCGTGGCCA
AAGCACAAGGACAATTTGATTGTGATAGAGAGATATCACTTTTTTTCTTCGAGCTGCAGG
CAGTTTGATCACAGATACAAGTCTCTATCGGAGTTGAAGAGTGATGAGAGTGAACCAGAT
GGGGCACTTGCAACTGTCCTGAAAGTCCTAAAACAAGCGCATGCTCTATTCTTTGAGAAT
GTGGATGAAGGCATATCAAACAGAGATGTTAGGTTAATGCTGAAACAAGTGCGTAAAGAG
ATACTTAAAGGATGTAAAATAGTGTTCAGTCGGGTGTTCCCAACCAAGGCAAAGCCAGAA
GATCACCCCCTGTGGAAAATGGCTGAGGAACTGGGAGCCACCTGCGCAACGGAAGTGGAT
GCATCAGTGACACACGTTGTGGCAATGGATGTGGGAACAGAGAAGGCTCGTTGGGCCGTT
AGAGAGAAGAAGTATGTGGTTCATAGAGGATGGATAGATGCAGCTAATTACCTTTGGATG
AAACAGCCAGAAGAGAACTTCGGTTTAGAGCAGCTCAAGAAGCAATTGACCGAAGAAGAG
TGA

Peptide Sequence

PEP ID

AT5G58003.1
PEP Infomation

| C-terminal domain phosphatase-like 4 | Chr5:23480066-23481924 FORWARD LENGTH=440 | 201606
Sequence

MSVASDSPVHSSSSSDDLAAFLDAELDSASDASSGPSEEEEAEDDVESGLKRQKLEHLEE
ASSSKGECEHPGSFGNMCFVCGQKLEETGVSFRYIHKEMRLNEDEISRLRDSDSRFLQRQ
RKLYLVLDLDHTLLNTTILRDLKPEEEYLKSHTHSLQDGCNVSGGSLFLLEFMQMMTKLR
PFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVISRDDGTVRHEKSLD
VVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQFDHRYKSLSELKSDESEPD
GALATVLKVLKQAHALFFENVDEGISNRDVRLMLKQVRKEILKGCKIVFSRVFPTKAKPE
DHPLWKMAEELGATCATEVDASVTHVVAMDVGTEKARWAVREKKYVVHRGWIDAANYLWM
KQPEENFGLEQLKKQLTEEE

Transcript Sequence

Transcript ID

AT5G58003.1
Transcript Infomation

| C-terminal domain phosphatase-like 4 | Chr5:23479781-23482136 FORWARD LENGTH=1666 | 201606
Sequence

ATCGGACAGAAGTTGAAAGCTTTACTTCTTCACTTTTACGGTTGCTCACCGTCGTGACAT
CTCCACTCTTTTCCTTTCAAAATCCAAAATCACGATTTGATTTTCTCTCGCCTCCGACGA
ACAAGTTTAAGATGAGCGTAGCAAGTGATTCTCCAGTTCATTCATCAAGTAGTAGTGACG
ATCTTGCTGCATTCCTTGATGCTGAATTAGACTCTGCATCAGATGCTTCGTCTGGACCCA
GCGAAGAAGAAGAAGCTGAGGATGATGTAGAATCTGGGTTAAAGAGACAAAAGTTGGAGC
ATTTAGAGGAAGCATCCTCAAGCAAAGGCGAATGCGAGCATCCAGGATCATTTGGGAATA
TGTGCTTTGTATGTGGACAAAAACTGGAAGAAACTGGTGTTTCATTTAGATACATACACA
AGGAAATGAGGCTCAATGAAGATGAAATCTCCCGGTTGCGTGATTCAGATTCGAGATTCT
TGCAACGCCAGCGGAAGTTGTATTTAGTTCTCGATCTAGACCACACACTGCTAAATACAA
CCATACTGAGGGACCTAAAACCAGAGGAGGAATACTTGAAAAGTCATACTCATTCTCTTC
AAGATGGTTGCAATGTTTCCGGAGGCAGTCTTTTCCTACTGGAATTTATGCAAATGATGA
CCAAACTGAGGCCGTTTGTTCACTCATTTCTAAAAGAAGCTAGTGAGATGTTTGTGATGT
ACATATACACAATGGGAGATAGGAATTATGCACGACAGATGGCCAAGCTGCTGGACCCCA
AAGGAGAGTACTTTGGTGATCGGGTCATTTCTCGGGATGACGGCACAGTGAGACATGAAA
AGAGTCTAGATGTGGTGCTTGGACAAGAAAGTGCTGTTCTGATTCTTGACGATACAGAGA
ATGCGTGGCCAAAGCACAAGGACAATTTGATTGTGATAGAGAGATATCACTTTTTTTCTT
CGAGCTGCAGGCAGTTTGATCACAGATACAAGTCTCTATCGGAGTTGAAGAGTGATGAGA
GTGAACCAGATGGGGCACTTGCAACTGTCCTGAAAGTCCTAAAACAAGCGCATGCTCTAT
TCTTTGAGAATGTGGATGAAGGCATATCAAACAGAGATGTTAGGTTAATGCTGAAACAAG
TGCGTAAAGAGATACTTAAAGGATGTAAAATAGTGTTCAGTCGGGTGTTCCCAACCAAGG
CAAAGCCAGAAGATCACCCCCTGTGGAAAATGGCTGAGGAACTGGGAGCCACCTGCGCAA
CGGAAGTGGATGCATCAGTGACACACGTTGTGGCAATGGATGTGGGAACAGAGAAGGCTC
GTTGGGCCGTTAGAGAGAAGAAGTATGTGGTTCATAGAGGATGGATAGATGCAGCTAATT
ACCTTTGGATGAAACAGCCAGAAGAGAACTTCGGTTTAGAGCAGCTCAAGAAGCAATTGA
CCGAAGAAGAGTGATTTATGTAACAACAATGAGAAAGAAGAGATAGCTTTTTTTTGTTGG
ATATTAATTATGAATCTATGTCTAAAGTAAAGTTTTGTAATGTACATTACATTGTATCTC
TGATATTTAAACAAGGTACTAATTTTTGGTTGATCTCCTTAATTATTTTGTTTCGTCTAT
GCTTATTTGCGAAGGTCTGTAATCTACCGACAACTTTTTTGGGCCG